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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0258500 |
| Transcript ID | LotjaGi1g1v0258500.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WAT1-related protein; TAIR: AT4G08290.2 nodulin MtN21 /EamA-like transporter family protein; Swiss-Prot: sp|Q9SUF1|WTR31_ARATH WAT1-related protein At4g08290; TrEMBL-Plants: tr|A0A151SK85|A0A151SK85_CAJCA WAT1-related protein; Found in the gene: LotjaGi1g1v0258500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:62607731..62615610) extracted from Lotus japonicus Gifu genome v1.2.
CTCATATATATATATATATGGCTTGGAAATCTTTGATACAATCTTGCTTTGGAGGTGAGAGGAGGGAAATAGGAGAGGAA GAAGGGATGCGAGGTAGTGAGGGTAGATTTGAGCTGGTGAGAGATGAGGAAAGGTGGAGAGCTCCGGGGAGAGGAAGCGG AGGGAGAAGAAGAGAATAGACTCAAGAGATGGAGGATTCCAGGCTTTGAGGGAGGATTTGATGGTGGAGATGAAGGATTT GATGCTGGTGACTGGTGTGGCGTAGAGAGGGAGAAGAGCTAGGATTTCGCGTGGAAGAAGAGAGGAAACACATGATTTGA GAGGTAAGATGGCTTTTATACCCATGTGATTGGTTCACTCGGTTTTTTGCCCACAGGTTGACCAGTTAGAGCTGATTTTT CCCCGTTTGGGCTTTTTTTGACCGACTTGGTAGATTTTTGCCTCTTTGGGCTCCTCTGATCAGCCCAATTTTTTTTAAAC GGTAAGCCCGACTCTTTATTAAATTAATATTTAATTATAGTATTGATTTATTATAAATTTTAAATCTTAATTAGGTGGAA ATAAAATTATAAATATGTTATATTATGGGACCCAACTAATAGTAAATAAGGAACCATGGTTGAAACAAAATCTGGGCACG AATATGGGCAACTATCTGGTTTAGAGTAGTCTCATATGTACAATCGTACCTCATACCCAAATATATCCCCATCGAAAGGG GACTTTTAGCCCTAGTCATGACACCATAAGGCTCTGAAAACTCTAGCGATAAACCCATAAGTTGATTGCCTTAATTAGCT TCCAATGAACCTGTGCTCTTAGTTAACAGAGAACTACTGGAAACCCCACCAAGCTCCTTCTCCTTTCCACCTATCTTCTC ATACATCCTTGGTCTTCCCTTAGGCCTCATACATTTAGGTCACCACCAACTGCGACAGATGCTCCTTATGAGTCGCACAC CCCCTTAGTTAAGCTTCTTTGGACGACCACACCCTCTTTTAGGAACTCTTACAGATAACCCTACCCTTAGGAAGAAGCGC CACCTCGCCCTCCCCACCTTGACCCCTGTCCGTCAAAAGGAAATTTGTTTGATTGGTACAATTCTAACTAAAAATGAAGT GTCGATTAGGCTAGGGCATTCTAATATTAGAGTACTTAGATTCATATTACAATACTAGTACTATGGGATCAACCACTTAT TGACATATGTGTTTAGCAATTATTTTTTACCGCCGCCAAAACGCAAAGAGTAAAAAGGTTTTTAGTGAAGAGTTTTAAAT CTCCACAAAATGAACATGCTAATTTTGTGGTAGTCTCTGTAACATTCTCAAAGTACTAGAAAATGATTTTTCTTATACTC TATAGATTATGGGCATTAGAAACCGTCACAATTCGCATATATCGATCCGGGGTTAAAAATCCCAATATATACTATGAAAC ATTAATATGATTATTATTATACTACTGCTCTTTAGCTTTTAGCGTGTGTATAAAAGGAAGGCCATCCATCTCAGTCTCAG GTACTCCCTCAAGGTGTGTTCTCATAACAAACCACAGCATTAATATTTTCTCTCTTCACCACTCTTCTCTCTCTTTGACC AGTCACACTCACCATGAGTTCCAAAAATGTGTTTTGCAGATTAGGCGAGCAACTCAGTGATGCAAAACCATACTTGTTAA TGATTGGGTTGCAATTTGGCATGGCTGGAAATTACATCTTCGGCAAGGATATTCTTAACCATGGGATGAGTCGTTTTGTG TTCATTGTTTATCGCAATGCCATGGCTACCGTTGCCATAGCTCCTTTTGCATTTTTTCTCGAAAGGTGTCAATCATATCA CTAGTATATTAGTTACATGTTACTTAATATCTTCCTTTATAAGCACTATATATTTCTTTCATTAAGTCGGTGACTAGCTC TACTTTTGTCAAATTTTTTATTCACTATATATTTTTCAGGAAAAGTAGGCCCAAGATGACACTATCAGTCTTCCTCCAGA TAATGGTTCTGGGATTTCTAGAGTAATGATCTAAAACCTTATTACCTATGTAACACATGACAAGAGCGTATCTCCAAGCA TATATTCATATAAAGGAATAATAAGGATTTTAGTTCTTTTTTTGAAAATAAGGATTTTAGTTCATGAAGTCACAACATTA ATCCTAAATTCATACATTAATCAGGCCTTCTGAGCCGTTTGATCACCGTTTGTTCCTGATCGAACGACTTAATTATATGT TCCATCAAAATGAGACAGCTTAGATAAACTCAATTTGAGTCATATATACCATCTTAATTAAATCGCTCAAATATCTTTAG TTCGTTATATAGTGCATGGTTAATTAATTTTGAGCAGGCCAGTTTTTAATCAAAGCTTCACTTACTTGGGGATGAAGTAC ACCTCCGCATCATTCGCATCTGCTATCACCAATGCCGTGCCCTCTATCACCTTTCTGCTCGCAGTCTTCGTCCGGTAAAT AAATAATTATCATCGCTGTTCATTTTCTTCTAATTTTTATATAGTTGGTGCGCACACTTTGATTTAATTTGCATATATGT TTATAATATAAGTTTTACATGTGTAAAGTAAGCTGAATAATTTATTGAATGAGTGTAATAAAACAATTTTATTTAGGCTG GAACGTCTCAAATTGAAGGAGATTCGGAGTCAAGCCAAAGTGATTGGAACATTAGTAACCTTTGGAGGAGCTTTATTAAT GGCAGTGTACAAAGGTCCTGGGTTCAACCTTTTTCATTCTGAAAACACAACCCACGAACAAGATGGAAGCATCTCCTCTC ACAGCCACCAAACTACAGGGGCTCTTTATATACTAATGGGTTGTGTGGCCTTGTCTTCCTTCTACATTTTGCAGGTAAAC GAAAATGACTTTGTAAATTAATTTTAGCATATATAATGAGGATATTGTTAATAACATGTAATAAATATTAAATGATGCAG TCAATAACGGTGAAAAGATATCCAGCAGAGCTATCACTGGCGACGTTGATTTGCTTGGCGGGAACAGCGGAAGGCACTGC GGTGGCACTTGTGGCTGAGCGTCACCCCCACGCTTGGGCAATTGGTTGGGACTATAGGATCTATGCTCCACTTTACACGG TTTGCCAACAAACTCATTTAAATTTAATGTTGAGAAACAACCCCTCTCAACATGGTACAGTTATTACGCCAACAAAATTG GCAGAACCCTGACACTACAGCTTAAAAAACACCAAAAAACATCTAAAAACCCCACATCCAATGCCAAACCAAACACAACT ATGAGAGGTCTCTATGGAAGTAAAGAAATGGTAGGTTTAGCCGAATGGGATCTTACCAATCGCACGACACCTGCAAGATA AAGAACCAACCCAAGCGTGCAATACACAAAACCCTACCATAACACCCAACAACCGTCATAGAGCTGAGATCTAAAGCCTA AAGAACTTGAAACAAAAAAAGTAAAGAAAAAGTTATTAGTTTACTGTATTTTGTTTTCTCCTTTTGCATAATTCTTTTTA GTAAATTTCAACCTGCAAGATAGAGAACCAACCCAAGCGTGCAATACACAAAACCCTACCATAACACCCAACAACCGTCA TAGAGCTGAGATCCAAAGCCTAAAGAACTTGAAACAAAAAAAGTAAAGAAAATATATTAGATCAAAATAAGTTTTGCGAG AATATATTAGATCAAAATAAGTTTCAATCCAATTAGCATTAACCATTCAAACTCGTGTTGTGCGAGAATATATTAGATCA AAATAAGTTTTGTTGTTGGGTGAAGAAAATAGGGTTTGAAGGTGACGTTGGTTATGATGGTTATTGTGGCCTATTTTTTA AATTAATTAAAAGAAAAACGAAAAATGGAATATGAGACTTTTTTTAAAGAGTTTTACCAAATAACTTTTAACTTAAAAGT AGCTTTTAAGTTATAAAAAAAATAAAAATGGACAAACGGCTTCTACTTTTTTTAAAAGCTCTTATTTTTAACTTTGACTT AAAAGTAGCTTTTAATTCCAAAATAAGTTGGGCCATACAAAGTCTAAAGTCTACTGTATTTTGTTTTCTCCTTTTACAGA ATTCTTTTTAGTAAATTTCAAGTCAATTGAAATTTAATATGACTATAAGTTATTTTTTAACTTACATATAAGTCATTTTT AATATTTAGAAATTGATAAATGAATTTTTTAAATTTACTCTCATATTTAATATAAAAGAGAAAGTGAAATTTTTAAAAGT TGTGAATTTTGAGAGATAAATTCATAAGAAATTAAGCATATGATTCAATTAGAGAAAAACATATTTCTGAATTTGTATTT TTTTAAATAGAGTAATTTAGGAAAGTTAATAAAACTTCTTACAAATTAATTATTACTCCTCTCCCTTTGTTTATTTTTAT AAGACCCCTTAGAAATACTTTTGTGTCCTTTAATATAAGACCACATACTAGATTTTATGAATATTTATTATCTTCTTTCA TATATACCCTTGTATTTACTTAGCTTTTCTATTGCCAAAGTTTGACTAACACTTATAATTAAGGGTAAATATGGAAGATT TGATAAATATTTTAAAAACCAATATATAATGTACTTCTACAACTACAACCTATGTATATAAGGCAGTGAGTGAGGATATG TTAATTAGCATGTTTGTCTGTTCTTTAGTACTCATGTGATTGCCATGTAAACTGAATTTTGTAAAGGAGGTTAGGAATAT ACATTCCTTCAACATGATCAAAGACAAGAGGGAGCGAAGAGAAGAGAAAGAATATTTGAGTCAGTAATCTATCATCATTA TCTAATAAAAGAAGTAATATTCTATCATTATGAAAAAGATGCATAAATGGAAGTACACGCAAATGCCTACAAAATCACTA AATGATCCGGGTTTCGTAACGGATACCTGCATTCATATCCATTACTTTTTGCAAGTCATCACACATCTCTCTGTCACCCG GAGTCCTCTCTCTCCAACTCCCAGTTTTCGTCAGACAGCCCTCTCCTTGATCTGTGCTCTGCATTTTTTTGTATGATATG TTTGTGGAAAACTGATAGTATTGGTATGTTGAATCTGATATGTGGTTTTTAATATGGGAATGAGCAATTTGTATGATTTC TTAACTACATTAGTTTTGGCACTAGAAAACTGGTGTGAATGTGATATGACAAATTTCAACAAAATTTGTTCAAAGAGCTT GAAATTTGATGTCCATTTGTGCCTTATTACTTCATATTATCAACATTTGTTTCCTCATTTTCTGTTATTATAGGTTCACT TGCAGGAGTTGTATTTCATGCAAATGGATATTATCAGCATTCAGCAACTTCAATGGTTGAAGACTATAAGATCTTATTTT TTAAATGTTTAGCTAAATATGATGCATTTAGTTACTTTAGATAATCTACAAAATTATCTAACATGCTCTTTTGGCCAATT TTATTACTTTAATCTTACACTTCAAAACTTTTAAATCGTAATAAAGAATGCTTGCACTGTAATATATGGTGCTCAGAAAG TTCGTTTCCCTCTTAATCTGCAAGAACTTATCCTAACGGATTTATTGTTAACATTATCTCCTTTCAGGAGGGAACAAGAT AAATTTTCTAATACTTGTTTAAACTTCAAAGATCTTGCCTTGGTTTGTTAATTTCACTCTTCATATGTATGCAGGGGCAT GTTGGGGAAGCTATTACTTATGGATCTGGTTTTTTTTTAAGGTAAGCTTGTCGCTTTCTGTTCTCCATTTTATTTACGAA ATATTTGGTGCATCATTGTACCTGACTTCCTTTTAAAGATGAATTAGACACAAAAACTTAATTAGTACATTGGATGCTAT TGATATGCAGTGGGAAAGATGCATTGCTCTTGAGTCAACGAATCACCAAAGAGAACATGTAAAAGATGTATATAAGTTAT ATTGTGGTATAGACTATAGAGGAAAAGTAATGTCAAAAAGGTTAGAGAAGTGGAGAGGTATGAACAATCACATGATCAAA CTAGATTAAGCAAGCCCCAGCCAGAAATGGAATGAAACAAAGGCACATTTACATAGTTAGGAATTGGTCTAGCTTACTGC TATAATCTTTTTGATAAATAGAAGCTCAGATATCTCAGATATATTGGTTCATAGCTTGTTTGTTAATTGTTATTACCAAC AAAGCTCAACACAGCTTATAGATAACCAAGTCCGGTAAGCATTACATGGGTTTGATCCTTGGACCTATGAATGGAGAAGA CATTGTTGGAAGAGGCAAAATCTGCTTCGGTAATTTTTACGTCTCAAAAGAGATTGTCTCAAAAGAAATTAGTCTCCGAA CGTGCATTCAGAGAATGTATCTGCTTGTGTCAAGCACACACCTGCTAGCCCGAGAACTAGAACTATTACCTCTGTTTCAT AATATCAGTCATTGAAGTTTTTCTGCAAGGATTAAGAAAATCATTAAATATCTTTAATTTCAGGAACATATGATTTCATT TGAGTAAATTAGGCTTTATTCCCCTTGTGCTTTTTCATTCACTTTACTCATTCCTTATATTGGTTATCTAAGGTGAAAAT ATAAATTTAAACAATTTCAGATCTGAGCTGATATTTTGGAAAGGAGGGAGTATCTACCTGTTTCCTTTTTAATAGATGTT GCTGCACTTTGAATCAAGGGATGAAAGTAATACATTTTGTTAGTGTGTTTGGTTTTGAGTTTGGGTATTTTGAACCAAGT AGAAGCAAACATGCAAATACAAATTGGCCTTAATTAAACAAGCTCTTTCTAGAAAATATTACTGTGCCTCAGGTGTGGAT ATTCCAGAGTCATTAAAAACATTCAATTTGAAGAGAGGTCAGGCTGCTCATAAACGAGGGAAGAAGAAAGTCTTAAAACT GATCCAGTAGAGAAAAATTCCAGATAGCTGCAAAAGAAGGATGTGAACTTGGATTCAAATGGCTTGCAAGGTCAGAGGAG GAAGAGAAGCGGTTACTCACAGAAATGTATGGAGATAATGGATACATTTATTAGTAGGGTGTAGTAATGGATCTTTGTAT CCCTTCACTTAATCACCTACCATGAATCTTATGTGTTTCAAAAAAAGTAAGAATCTTGTGTTGTATGTATTAATGGATGG ATACACTTATTTTAAATCATTCTAAGTCTTATATGACCGCGTTCTTCGATGGAGCAGCAACGCTGGGTTAGGTGGTCCCC TTCCCTCAAGGACTGCATTGTGGTTATTGGTTAATGTTGATGGTAGCGTCCATGGGACGCCGCGTCGAGGTGACATTGGA GGGTGTCTTCGTAGCATGGTTGGAGAATGAATTGCTAGCTTTTATGGTTTCTTGGATGATTGGACATCCTGCTCTTGGAG TTACTGGCTATCTAATATCCTTCACTACAACAAAACTGGGTGTTAGCGGCGGTTGTAAGTAGGACCGACGGCTGTTAAAA CCGCCGGTAACACAAAATATGTGTTCTATTGTTTCTGGACCTAGCAGCGGTTGAAACCGCCGCCAAAACTCCAGAAAATT AATGTTTTTTTTTTCTTCTGTTTTTGGTTTTTTTTTAACCTACTTTCTAATTTTCTTTACATAATAAATTAATCAACAAA GGGAAAATTTTGTGCCAAAGAAAATCCATTCAAGCACCACCAAATACATGCATAAGCATATATATATCCACCAATTCTTC ACAATGAAGCTAAGAGTGCTTAACACAAATCCAAAATTTAAGTTATGTTCCACAAAGTGCACATAACATGTCCCACCAAA AGGAATTTAACATAATTGTATTTTCCATACATGCTCTACGAAGTACATAACATGAAAATTGAAAAATCTAAATAGTCTTT TGTGATGGTGTTCCTTGATCTTCAAACATGACTAGAGGAG
CDS sequence (LotjaGi1g1v0258500.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGTACACCTCCGCATCATTCGCATCTGCTATCACCAATGCCGTGCCCTCTATCACCTTTCTGCTCGCAGTCTTCGT CCGGCTGGAACGTCTCAAATTGAAGGAGATTCGGAGTCAAGCCAAAGTGATTGGAACATTAGTAACCTTTGGAGGAGCTT TATTAATGGCAGTGTACAAAGGTCCTGGGTTCAACCTTTTTCATTCTGAAAACACAACCCACGAACAAGATGGAAGCATC TCCTCTCACAGCCACCAAACTACAGGGGCTCTTTATATACTAATGGGTTGTGTGGCCTTGTCTTCCTTCTACATTTTGCA GTCAATAACGGTGAAAAGATATCCAGCAGAGCTATCACTGGCGACGTTGATTTGCTTGGCGGGAACAGCGGAAGGCACTG CGGTGGCACTTGTGGCTGAGCGTCACCCCCACGCTTGGGCAATTGGTTGGGACTATAGGATCTATGCTCCACTTTACACG GTTTGCCAACAAACTCATTTAAATTTAATGTTGAGAAACAACCCCTCTCAACATGGTACAGTTATTACGCCAACAAAATT GGCAGAACCCTGA
Protein sequence (LotjaGi1g1v0258500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKYTSASFASAITNAVPSITFLLAVFVRLERLKLKEIRSQAKVIGTLVTFGGALLMAVYKGPGFNLFHSENTTHEQDGSI SSHSHQTTGALYILMGCVALSSFYILQSITVKRYPAELSLATLICLAGTAEGTAVALVAERHPHAWAIGWDYRIYAPLYT VCQQTHLNLMLRNNPSQHGTVITPTKLAEP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 162 | 162 | 3.6E-98 | ||
| PANTHER | 1 | 162 | 162 | 3.6E-98 | – | |
| Phobius | 1 | 5 | 5 | - | – | |
| TMHMM | 5 | 27 | 23 | - | – | |
| Phobius | 6 | 29 | 24 | - | – | |
| Phobius | 30 | 40 | 11 | - | – | |
| TMHMM | 40 | 59 | 20 | - | – | |
| Phobius | 41 | 59 | 19 | - | – | |
| Phobius | 60 | 88 | 29 | - | – | |
| TMHMM | 87 | 106 | 20 | - | – | |
| Phobius | 89 | 106 | 18 | - | – | |
| Phobius | 107 | 117 | 11 | - | – | |
| Phobius | 118 | 139 | 22 | - | – | |
| Phobius | 140 | 190 | 51 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0258500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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