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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0268000 |
| Transcript ID | LotjaGi1g1v0268000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BTB/POZ domain-containing protein; TAIR: AT4G08455.1 BTB/POZ domain-containing protein; Swiss-Prot: sp|Q6DBN1|Y4845_ARATH BTB/POZ domain-containing protein At4g08455; TrEMBL-Plants: tr|I3T836|I3T836_MEDTR Broad-complex, tramtrack and bric A brac protein; Found in the gene: LotjaGi1g1v0268000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:65423641..65431645) extracted from Lotus japonicus Gifu genome v1.2.
CAAAACACAAGAAAAAGACAGCCTGAAGCAAAATGCCTCCGCGGCGTGTCCCGATGATGTAAGCGCCGCCGGTGTTGCTG AGTGGCAGCGATTCCGACTCCGACGACCACCACTTCCATTTCATGGCGCGGTGCGTTTCCTGCAATGATGAGTACGACCC AAACGACGACGCCGGAACCTGCAAGGAGTGCTACGAGGAGGCCAACGAGACGGAGCAGGAGATGAAGGAGCAGATCGAAG AATTGAAGGCGAAATCCTCCTTCCTCGCACTCGCTTCCCCCATCGGCGCTCCTTCCTCCACCACCGATGTCATCCTTGTT GCTTCCGCTGACGCTGCCTCTCGCCCTGTTCCCGCTCACAAGGCTGTTCTGGTTAGTATACACCCCATTCATCTTTTCTC TCTGTGTTTGTTTCCCTTTGTTTTTCAATATAGATGAAGAATTTACATGTGGGGGGCATTGTTTGTTGTGTAAGTAAATT GTGTAATTTAGCGTGTTATGAGCAAATCGGATCATGAAATTGATAATTTTATCGCATAAATTTAGGAAATTTAGATTTTT TGTTCCATGAGGACTAAACCCTAGTTCACATGGCTTTTTTTGTATTTTTGTAGTGTAAGGACTGATATGGAAAATTATTT TATGTTCTTGGCCCAAAATATTGTTTTCTCTGATCTCATTTTTCATGAATTGAAATGATGAGTTACTCTTACTGTTAGCT GGAGCTCCTAGGTTTTTGAGCTTGAGTAGTTTGCTAACAATAACATCATCAATGTTGTTAGTGATGGACTATGGCGTAGA GCCAAAAACCCGCCACATTTGACAAATAATGATGGTGGATTATGGCGGGATATCAGCCAAGGTGGAGAGGCAAAAACCCG CGATGAGCCGCCATTTGATAACACTGAATATCATGCTGGTGAAAGTTATTAGTTTAAATGTTTGCTTTTAGGAAATTAGT TATGCGGCGGATTGATGTTATTTTACTTCAATAGAACCCCAAAATTAGTTCACAACAGCCTATATTTGAATAGTAGTTAT GAAACTGGATTGTCCGGTTGGACCGGAAGCCAAATCCTTGGCTGTTCTGGTCAAAGGTATGGATCGGATATGCAGTGAAA CCGGACCGAGTTTCGTCCGAGAATCCAGACCAGTAGATTACCCGCTGCACTAACTGGGGAAAAATCCCAAATGCGGCCGA ATGAGGTTTCGAACCCTGTGACATGTGCAGCACTAGGTTGTAAACACTATGACCCCACATCTGTTTAATACATATATTAC TTATGTTAATATATAGTGCGTATTCGGAAACCGGTTAGGTTTTTGTGTTTAGGGCTTTGGGGAAGAGGTGATTCTGGAAG AATCTATTAGGATTTAGGAGCAGCTTTTATGAAGTGAGCTGTGATTCTTGGAGGATGAAAAGTGAATTTAAACATGCTGA TAGTTGTTTGTAAAGTAAATTAACAACGAATTTGAAAAAATACCTAGAAGGTGTCAAACACAGGTTCTTTGCTATATAAA GCACAGCTTTAACCACCAGGATACGCATGTTGAACAATGCAATCTAGCCCTATTTATTATATATACTTATATATCATTAA TAATAGTTGGTTCAACTAGTGACTCATTGACTAAGTACTTTGAGCGAGTTGATAACCGTTCTGAGTTATATTATATTGAT TTCAATAGTGTTCTTAAAGTTTATTCTTCAGCTCAAGGACCAATTTGAAGTTGGTGGTAAATGTTAAGAACTAATTTGGG ATATTACTCCTTCTCTTCTGTAGTATAATAATGCTTATAGATAATTTGCACCAAGATAAAGGTATATTTGGGAGAAAGGA ATATGGGTGAGGTATTTGGAAAAACATACGTCACTCCTCAATTTTCCACCTCCCTGTTCTCCCTTCTACCAAGTTTGCCA CTGAAAAAGATTAATTCAGAACTATATTCTCTTCTCTCAGGAATAAATGATTATAATGTGCTGACGCCTGACAATAAAGA TCAATCCATAAGTATGCTCCTGAATGCTTTATTAGGAATCTATTTTATTCTGTTTGATAACTTGGATCATACAAGTGTTT GTTTAGTTTGGCTAACCACATTCTGTTTTTATTAGTGAAAACAGAAATATAAAAAGGAATTGTTTTCACAAACTAAATAG GCCCTTAGGTTTTAAGACTATTAGGTGGAGCATACACTTCCTTTATGTTTTTCCAATTTTCTTTGAGAAATCCTTGACAA GGGCCTATGAGCATAGTACTCAAAATCAGGGCAATGACCTTAGTCGGAGAGGGGGAAATTAATCTTAAATTGCGTAATCC TTAGATTTAGTAAATTTGCTATTTATTTATTTATGTGCATATAAATTTATATATATATATAATAACAATAATTAAAATTT ATTTAAATAACTAAAAACAAAAATAAAATTATACTCAGAACTTTTATAAAAAATAGGCCAACTAGGTGCTATAAAACTCT CGCTATGTGCGAGGTCCAGAAAGATAGAACTGAAGATCTGTGACTGAGAGGACGGAACTGAGAAAAGGGGGCAAGATAAA AAAACTCAGAAATGGTCGTCGTGGCCGCCGTCGCAGCCATTACCGTTGCAGTCGCAGCCGCCGCTGTCGCAGGTGCTCGT TGTCGTGGATCGCTGCTGGACAAGGTGAGATGGTCCCGATCTTAGGGTTTTTTAGTTTTTATCTGAATGAGTTTCTCACA AAACAGGTCAAACCCAGGAAGATCTGGATCCTCCAAAAACCCTGATTAAGCTCAGATTATTGCTGAAAGTGATATTGGGT GTGATTTTAATCGCTCAGGGGGTCACTGATTGCATAATCGTTTCGTATGATTATGCGATTAAAGTCCTGATTTTGACTAC CATGCCTAATTGCCTATGAGTTTACTCTTGTGCTGTAACCAGATCAGACTCCACATTCTTGTGATCAATAATACATGAAG TCTTTCTTGGACTTAATCCCTGCATGTAAATCAGTAATCAAAGTTTAACATGGTACTCTCTATTTTGCTGTCTGCTGTTG TTAGGATCATAGGATGTATAATGGACAAATAAGGTTGAATCCATGATGCAATTTACTATATTAGTGTACTCTATCATGTT ATTATGATTTCTACTTTATTTGGCTGTTCATAACTAATAATATCTTATGACATTGAATAGGTTAGCCGCTCTCCAGTTTT TAGAGCCATGCTTGAAAATGACATGGAAGAAAGCCGGAGTGGCACCATCAGGATTACTGATATATCATATGATACTCTTT GTTCTTTTGTTAACTATTTATACACTGCTGAAGCAATAGCATCATCCCTTGATAGCCAAATGGCCTGTAACCTATTAGCT TTGGCAGAAAAGTATCAGGTGAATCATCTTAAAACATTCTGTGAGAAGTACTTGATCAGCAAACTGAATTGGGAGAAAGC TCTTGCATTATATTCCTTTGCAAACCAACATAATGCAAACCAATTGCAAGATGCAGCCTTGGAATTTATTATCAATGACA ACATGGCAGGCCTCGCTGCACATGAAGATTATCAGGATCTGGTGGACAGTAATCCTCGTCTTGTTGTGGAAATATATGAA GCATATCTTACCAAACAGGTTAATACAGCTGTCCTTAATTTATAGGAACATAGCGTATGAAAGTAATATAGTCAACTTGT GGTTAAACTGGGGTGATACTTCAGTTTCGCTTATATTCTTGATTGGTGATTATTCTGTGGTAGTATTTTAAGTGTACATT ATCATACACTGCTACTGCAGTTAAAGTGTACATTATCATACACTGCTACTGCAGTTAAACTTGCAAGTGCACCCGCTACC TCATCCAATTAAGTTGCACCCTGCAATTATTAATTTTAATTGCACTGGTTACCGAGGAAGATCCGTTATTGTTCCTCCTT TATGTTACTGCTGTTGAAAGGAGGCCACCTATAGTGCTTGTTTTGCAGACTTCCATATCAGCAGAAGATTTATGCTTTGT TTGGTTTAAGGAGAGAAGAGAGAATGAGAGGAGAGAAGAGAGAATATGAGTAGATAGAAAGAGGTGATTAAGGGAGTAGA TTTTGTAGGTTGATTGGTATAATAAAAATAGGAGAGAAGAGAAATAATGATGTAGATACTCTCTTCTCTTGTCTGGTTGG GTAAAAAGGGGAAAGAGAGAAGATTACTTTTGTATAAAAATACATTTTTACACTATATTAAAATGATAGATTAAGGTTTA TTGAGGGCACTAGTGTAAATTTTTAAAAATAACCACACTCTCCCACCTTTCTTCTAAAAAATGGAGACCAGAAAAAGGTG GTGTTAGACACTTTGCCTCTTCTCTCTGCGCTACAGGGCTTGCTATCAAACAAGACTAGATGACCTCTCTTCTCCCTAAC TCTCTGACAACTCTCTCGATTCAAAGTCCCTTAAAACAGAGTGTTATGGAAAAGGAAAAAGCTAAGGAAACAAGATATAC GTATAGTTGATGTTGCTAGTGAAATGTGGGAAAATAGGAATACGAGTGGATTTACAATTCTGGATATCATAAATCACAAG TTCACTAGCTATCTCACCTAACTACGGTTTCAAGATTATTAGTTATGGGTATGTCAAAAAAAAAAAGATTAGTAGTTATG GGTGTGTTTTGTTATTTGAGTCCATCTAATAGCATAAAAGTGTTTGGATAAGTTTATGAAAATAGTTTATGACATATACA AGTTAGTTTTTTATGAGCTAATTTTGACTAGTTTTTGTGATTATCTTATGAGTAGGTGATTATACTTACATATATGGTCT GAATAGGGTCTGTTTGATTGCAGTTTACAAAAACTGTACTTAAAACTATTTTTAGAATATGTTTTTCAAGAATAAAGTGT TCAAATTAGATATTTTCCAATATTTAAAAAATTGTAATCAAAACTTGAAACAGAAAACATCTTTTATCTTTATCTGTTCT GGTATTTTAATTTTAAAAACTGAAATTGAGAACTGGTTGTTTTGAAAACAGTTTTCCCAAACAAACAAGTTTTTAGAGTT ATGATAATACACACCTCTACCCATTTTCCATTTTTATTTTCTATCTATTTCTCTCTTCTTTATCAATCAAATCATCTATC ACATCTTTATTTTATCTCTCCTTTCTTCCTATCTCTCCCTTCTTCCACCTCTCTACACATAAAAAATGAGGTGTGAAACT ATAATTACTCAAGTTTTTAAATTTTTCAGTTTAAAAAAAATTGTGTTATCAAACCGATCCATAAACTCGTTTGACCTTGT TTTTATAAGCCTCACAAATAAGCTTTTGAAAAAATTTCTTATGTGATTAGTGTTTGTTAACATCAACACTTAATTTAAAT GTGTATAGCTCAAGTGGTAGGACTTGGGGGACATATGGGTTGGGTAGGGGAGGTTCAGGGATAGATTCCTGACAGGTACA ATTTATCTTTCCGATGTAAAAAAAAATGTGTACACAAACGCATTGAAAGCATGTTTTGAAACCAATGGTGAATATTTTTT AGTCATAGGTTGAGAATTTGAGAAGGTAGTTAAGGTGTCGTCTAAGATAAACCAGCAGGTGGGTGGTGTACCTGTGAGTT GAACCTTGTAAAACCTTAATTTTAGTTCAAGAGTACTTTAGTAATTATATATTTTATTAAGTAATTATAAATTATTTGTC TTGGCTTGACATAAATTTATTTATTTATATATTTAATTTTAGAGGTTTTTGGTTTATTGGTGAAACAAATATTTTTTATC TGAATTGCTGTGATGTAATGCACACATATTTCCCTTAGGGAAAACTATTTGTTTGGGTTATTACTCTATGAATATACTAT ATGAATATACTATTTGAATATACTTTAATAAAATGAAAATAATTATGGTTAGAGTTATTTTAATTATTTTGGAGAAAAAA ATTATTATTTGAATTATTTTAGGTTTTATTGATTAAAAATAGGGTTTTTCCTTGTTTTATAGAGAGAAAATAGAATAGAA TTGTTTTTAGTTAAAATAAATTAAAAATATGAAAATCTGTTTGAAAATATTGATTCAGAGGTGATGTGGATTTTGGAATT ATAATTTTTAGTATTTATTATTATGTATCAGTGTTAAATTCAACTTCTGAATAGATAAGGTTTAAAATTAAGAGATAATG GAGGAAATTAGAAGAAAGAGAAATTTTGATTTTTATTTAGAGATAATTATTTTAGATATTATCTTAAAGATAGTTATATT TATTTTGAATAATTATCACTAGATAATTATTATTTTAATTGTTGATCATGTTTTTAATTTTCACATGTGCTAAAATAAAA ATGGTGAGTGGGGGCTGAATATTTTTGTGGGTTTTTTTTTCAATACCTCGGAAAACTTATTTTCATGGTCTTTAGGTGTT AGTGTGGGAGATTTTCTTTTAAAAATTGATTTATTTTTTGTTAAGGGGGCGTTTGGTAGGAGCCTCGTTTGGTAGCCCCC TAAGGTTTCACTTAATTTAAGTGTCAAGGAAAAATTTAAATTGTCCCCTAATTCTTAAGAGAGTGGCGTGATCAGCTTAG GGCTTTGAGGGTAGAATTTTCATTCTTTTTCTCTCTTGACAGATGGTTGAATTAATTCTGAAATTTTGTATTTTAATACA TATTTAAGTGATAAGAAAATTGAGTTTAGGTGATGATAAGTGATAAGATGAAGAAATAAAACTCTCTCCTATCTCCTAAT GCTATGTGCATATCATGGGAGTTTTAGGGGCTAAACTTCTTCTTTTCAAATCCTATATATAGAGACCTCTATGATGAAGT TTTTCATTCAGAAATTTCATCTCATTCCTTTCTTCTTTGTGGCTGAATTTTCCTTTCCTTTCATTAGAGAAATTCTTCTG TTTTTCTTCCTTGTTCAAGAGCATCATCAAGGGTGAGTTTTTATGAAACTTTTCCTTCTTTCTTTTCTGATTCCATGAGC TGAGTGTTTTGGGTTGTAACTTGAGGTTTTAGAAAAATCATTTCATCATCTACTTCTTTCTTTTTGAAAATCATGAAATA TGTTACTTTGAAAAATTGTTTCCTGAACCTTTCTTTCCCTATATTAGGCTGCAGGTTTTAAAAGGACCAAGTCTCTTGAG GTTGTTTTGTTGTGCATGGCATAATGCATTTGTAAGAGTTGATTTGAAGTGGCAATGTGATGGTTATTTGTCTCATGTAA TTGTCCTATCTTACAAAGGTGTTTTGAATTGCAAGTGGTGATGGGACAATGGCTGGCCTGTCTTACGAGACATTTTGATC GATCCACTGTTGACAGTTGCATGTAGTTTGCACTCTAAGTTACTAACCATATCTTTGTTGATGATAACATGATTATATTT GAATATGATGCTTAACATGTATTTCTTGTTCTTTATTTGATTGTTTTATTTTATGAGTTAACTATTTTTTGTTTGTTGTA GGGTAGGAAGATGGAAAACCCTGGAGTCCATGATTTATTTCATATCTGAGACGGTACCAGGGGTGGTTGCTCATAGGATC AACGAGAAGCTTAAGGCGGTGAAGACGGAGATCTATCACTTCTTCTTCGACGTGAAAGCTACAGGCAACCCTGGTTGTTA TCTAGTATTTTGGAATTTTAGTTTTCTTTTGGTTTTTTGAAGCACATGGCTACAAGATAACTAACTATTTTGAATTGCTA TTATATCTATATAATTTGGGTACATTGTTATGGATATTGCTTTTAAATGTTGATTTTTGAAATTGATTTTATCAAACGAG CCATGGGAATATCTTGTTGATCTTGTGCATCTTGCCCCAACTCCCAACCTGTTTGCTACATCATTTCTGGGCTTCCCAGA TATGATTTCCAGCTTGTGAAATTAGTTCACACTGTTTTGATTGGCTGCTGTTCTTTCACTTTGCTGCTTGGAATCGGGTC ATTTCAGACCCTCCCTTAGCTCCGCTGCTGTGTCGTGATCTCTTTTTCAGGTTGGTGTGACAACTTGTCTGGATGTTGGT TTTAG
CDS sequence (LotjaGi1g1v0268000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGCGGTGCGTTTCCTGCAATGATGAGTACGACCCAAACGACGACGCCGGAACCTGCAAGGAGTGCTACGAGGAGGC CAACGAGACGGAGCAGGAGATGAAGGAGCAGATCGAAGAATTGAAGGCGAAATCCTCCTTCCTCGCACTCGCTTCCCCCA TCGGCGCTCCTTCCTCCACCACCGATGTCATCCTTGTTGCTTCCGCTGACGCTGCCTCTCGCCCTGTTCCCGCTCACAAG GCTGTTCTGGTTAGCCGCTCTCCAGTTTTTAGAGCCATGCTTGAAAATGACATGGAAGAAAGCCGGAGTGGCACCATCAG GATTACTGATATATCATATGATACTCTTTGTTCTTTTGTTAACTATTTATACACTGCTGAAGCAATAGCATCATCCCTTG ATAGCCAAATGGCCTGTAACCTATTAGCTTTGGCAGAAAAGTATCAGGTGAATCATCTTAAAACATTCTGTGAGAAGTAC TTGATCAGCAAACTGAATTGGGAGAAAGCTCTTGCATTATATTCCTTTGCAAACCAACATAATGCAAACCAATTGCAAGA TGCAGCCTTGGAATTTATTATCAATGACAACATGGCAGGCCTCGCTGCACATGAAGATTATCAGGATCTGGTGGACAGTA ATCCTCGTCTTGTTGTGGAAATATATGAAGCATATCTTACCAAACAGGGTAGGAAGATGGAAAACCCTGGAGTCCATGAT TTATTTCATATCTGA
Protein sequence (LotjaGi1g1v0268000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MARCVSCNDEYDPNDDAGTCKECYEEANETEQEMKEQIEELKAKSSFLALASPIGAPSSTTDVILVASADAASRPVPAHK AVLVSRSPVFRAMLENDMEESRSGTIRITDISYDTLCSFVNYLYTAEAIASSLDSQMACNLLALAEKYQVNHLKTFCEKY LISKLNWEKALALYSFANQHNANQLQDAALEFIINDNMAGLAAHEDYQDLVDSNPRLVVEIYEAYLTKQGRKMENPGVHD LFHI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Coils | 20 | 44 | 25 | - | – | |
| PANTHER | 21 | 232 | 212 | 2.0E-53 | – | |
| PANTHER | 21 | 232 | 212 | 2.0E-53 | – | |
| Gene3D | 27 | 166 | 140 | 2.0E-28 | – | |
| Pfam | 59 | 164 | 106 | 4.5E-23 | ||
| SUPERFAMILY | 59 | 163 | 105 | 5.02E-24 | ||
| CDD | 61 | 148 | 88 | 3.57239E-24 | – | |
| ProSiteProfiles | 61 | 132 | 72 | 17.686 | ||
| SMART | 61 | 165 | 105 | 7.6E-22 | ||
| Gene3D | 167 | 238 | 72 | 2.0E-13 | – | |
| CDD | 177 | 224 | 48 | 9.93736E-5 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0268000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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