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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0275800 |
| Transcript ID | LotjaGi1g1v0275800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Peroxiredoxin; TAIR: AT1G21350.3 Thioredoxin superfamily protein; Swiss-Prot: sp|P0C5D4|PRXQ_ORYSI Putative peroxiredoxin Q, chloroplastic; TrEMBL-Plants: tr|A0A0B2SBZ9|A0A0B2SBZ9_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0275800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:67455270..67459148) extracted from Lotus japonicus Gifu genome v1.2.
CCAGCACGACCCAAATGAGAAAAAAAATTGAGAAAACGAAGACAAACAAGCCTGATGAAGAAGATGATGATGGAGAATTG AGGTTGAGGTTGAAGTAACATGTCACTGACATTGAGAATGTGTTCTGTTGGTTCACCTTTTCTGCAGTTAGGTTCTACTT CTACTGCACAAGCATGCTCCATTTCCAAACTGGGTTTTCAATTTCATCCTCTGCGTTTTCAACTCAATAGAAACTCATCC CCTACAAGGTTTCTGATTCGGGCTGCAAGAACTGAGTCTAAAGGTGTTACCTTGGGCTTCAGAGCACCCCAATTTCAGGT TCTTACATTCCCCCTGTTATTTATTACATTCTTAGAAACTTGGAATAATTAGACCCCTTTAATTTTTATTTTTGGATTGG TTGAAATTGAATTAGCTTCCAGAGCCTCTTACTGGGAAGGTTTGGACATTGGAAGATTTTGAAGCACATCCAGCTCTTCT GGTTAGTACCATGAATGCTAACTTACTCTTCATTCGTTCTGCTTTTTATCATCTTTGTTTGTTAACTTCAGTGCTGTTCA AATTTATTATGCTATGTCTGCCTGGAACCCTGAATATATAATTTACAGGTTGTTTAGAGGGGGTTAGTGGGGGATTTCGG AGGGGAAGGGCAGAATTTTCATTTTAAATTATGACTTTGCCACATGATAAATAAATAATACTAAAAAAGAAACTTGACAA AATATGATTGGATGTTTGTTTAAAACTTTTCGAGTGCATGTAAATTAAATCCCTTTTCTAATTTAATAATTTCTTAGAAT GAAAGATATCTACCAACAAGATGTAGCCCAACTGGTAGATAGTTGAACTCCTTAAGCATCTAGTTCAGGGTTTGACCTTG GGCGGGTGCGTATGGAGAAACATTTGAAAGATATATAATTATAGATTAGAATTAACTTATAAATTTCTAGTCCTGTAATT ATTATCATAAACATTATATAATTCTCATTTTATAAATAATAAATTTGTCATCCCTTCCCTTCCTCTCCAAAATCCCTCCC AAACAACCTTTAGAGGAGTTGAATAAAATGTGTTTATAAAAATCAGAAATATTCTTTTCCTGCTCAGTTATGAGATTCTC ATGTGCCAAAAATTCTCCAAAACCCATTTATGTGGCCAATTTTTATGAACTATAATGCATAAAGCATGAGTTTCTTGGAA GTTATAATTTAGACCTATCTCTAGGTGCTAAGGCAATGAAAATGCAATCTTTCTCTTTGCTCAGTTGTGACTTCTGACCC TCCCTCTTAATGTGTTCGTGCAGGTTATGTTTGTATGCAACCACTGTCCATTTGTTATACACCTGAAAAAAGACATTGTC AAGCTTACAAAATTCTATATGAAGGTATCCAAACTAATTACCTGAAAAGAAATTTATTTATTTCTTTTTTCAATAGAAGG TTGGCCTTGCACTAGTAAATACCATTATAAGATTGTTCATTCCTTTATCTACAGAAAGGACTTGCTGCCATTGCTATATC TTCAAATTCTGTAGCTACACACCCCCAGGTTCTTGTCATTTCATATCTTGGAAAAAAGCTATGTTGAAAGTATTGAATGA TTCATCCAAATTGAACCTATGCCTCACAGGATGGGCCAGAATTCATGGCAGAAGATGCTAAGCTGTTTGATTACCCCTTC CCATACCTATATGACGAGGTATGCTTCAGTAAATCTTAACATGTTTTATTTATTCGCAGTTCACATGCGAATGTGTTTTC GAAGTCTTGTCTTTTCCAAATTGTGTCACATTTTGATGCAAACCAATATAACAGTAGTAAAATAGAGTAATGAAGGAAAG GAAATGTTTGATTGAGAATAACAGAAATAAAGAGTTACAGTAGTGTAATACTACTCCAGAGCCTAGCTCCTATAGAGAAA GCACAATTTCTCTATTCATTCTTACAATGATCATAATCTCAGGTACCTCTCTCTAGCTAACAGAATTCCCCTGATTCCGG TAACTAACTTCCCTAGCTTTCTTTCTCACACTGCCAGCTCACCCTCCTTCTAGGTGCTTCTATTCTTTCCCCTCCTTGCA TACACGCGCCACACCTTGGGCCTTTGATCAGCTATTCCAGCCCACTCTTGACTTGGGGGCCTATCAATACCACCCTCTTG AAGCACAACCTTGTCCTCAAGGTTGAAGGCGGGAAATTGGTTCAAAAGTGTTTGCTCATCTTCCCACGTTGCTTCCTCTG CAGGTTTCCCCTGCCACTGGATTAGAAATTGCTTCACTGTCTCGTCGTGCTGCAATATAGCTCGGGTGGCTAGCACCAAT GCAGGTTCCACTGACTCCCCGAACTCGCCATCCATTCCCTGTGGCAACTCTTGTTCCACTGAATAGTTCCCAACCGCTTT CTTGAGTAATGAAACGTGAAAAACTGGGTGAATACGCGAAAACTGGAAACTCTTTTCTGACTGCTGAAGCTCAGTTGGAA TTGCTGGTGTTATCTTCGTCTGTAATTTTGTATAACCCTTATAAATTTGATGGAATGCTTCCTGTTGCAGTCACAGGATG TTGCCCGAGATTTTGGAGCCGTTTGTACGCCAGAATTTTACCTTTTCAAAAAGGTAATTACAACCAGCACTGTTCCCTGT ATTGCACATTGATCAGTGTGACTTTGTTTTGGGGTTAAATTAAATCCTCAAAGTCAATGTGTATCATATTTCATCCAATT GATCAAATAATAACAGGATGGTCGAAGACCATTTGAGCTGGTTTATCATGGTCAGTTTGATGATTCACGGCCAAGTAATA AAACACCAGTCACTGGAAGGTTGGTTTATTATGATTGAGTTAGCATTGAACAATTATCTGAACATTTTTAATCTCTTGGC AGTTGTAACCATTTGATTTTAATTTATAGAGACTTGAGCATGGCAATAGATTGTGTTCTGAGTTGCCAGCCGGTACCATC AGAGCAGAAACCGAGGTAAATTGCTTTAGAGTCTTTCAAGTTTTGGTCTCTGTCATGATGATGTGCTTAAAGTTAATGTG GTTCTGTTTGTATGAAGTGTTGGATGCAGCATAAAGTGGCACCCAGAGAATAAGTTTTGATCTGTAAATTGTGATTATCT ATGTCAAGGTACTAATCAGCGGGTTCGAGTTTTTCTTTGGGTTTTTCTATGTTATATTTAATGTCCCTAACCATATCAGA ATCTTATCTTACAACTGTTTTTTTTCTTTTCTTTCCATCCAGCATCTGTTTACAGGGTATGTCATGTCATTTAAGTTGAG CAATACGAGATTGAATTCAGTCAGATGAGGTTCCAGTCTCCCTATTCCTTGTTTCTTATGTTGTAATTATTAAGGAAACC TGTCTAGCAACCCTTCTGGAATACAAACTTATATATGCTGATTTTTGGTAAAATAGTTATAATGATTTCTAATATGTAGA TATCTGATTTTTTACACATACTTTAAGATCAAATTATAGTGTTTTAATTTTATGCTCTGAGGTACATATAAAACTATATA TACAAGGCCAAATTACATTGACATCCTATGGTTAGTGGTGTCAAGATCCGGATCTTAGGATCCCGTGTTCTTGCGATCTT TTTGTTGCTTTATGATTTGGATCCCACATAGGAAGAGTAGGATCCGTCTAAAGATCCCGATTTGATCCTAGGACCAGGGT TTTGGAAATGAGCCTCTGGGTTTCAACCCCAAAAGAGAGACTTGCTCGAGCTGCTGGATGTTTGCGGCTGCTTCTCATCT TCTCCCCCTCGACCTCCGCGCACAGCCTCCGCAGTCGACCTTTCTGTATCAAGTTTTTCCTTTCTGACATTTAAAATACT CAATAGTAGAGCTTTAACTGTACTTTAAAATTTACTAGG
CDS sequence (LotjaGi1g1v0275800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCACTGACATTGAGAATGTGTTCTGTTGGTTCACCTTTTCTGCAGTTAGGTTCTACTTCTACTGCACAAGCATGCTC CATTTCCAAACTGGGTTTTCAATTTCATCCTCTGCGTTTTCAACTCAATAGAAACTCATCCCCTACAAGGTTTCTGATTC GGGCTGCAAGAACTGAGTCTAAAGGTGTTACCTTGGGCTTCAGAGCACCCCAATTTCAGCTTCCAGAGCCTCTTACTGGG AAGGTTTGGACATTGGAAGATTTTGAAGCACATCCAGCTCTTCTGGTTATGTTTGTATGCAACCACTGTCCATTTGTTAT ACACCTGAAAAAAGACATTGTCAAGCTTACAAAATTCTATATGAAGAAAGGACTTGCTGCCATTGCTATATCTTCAAATT CTGTAGCTACACACCCCCAGGATGGGCCAGAATTCATGGCAGAAGATGCTAAGCTGTTTGATTACCCCTTCCCATACCTA TATGACGAGTCACAGGATGTTGCCCGAGATTTTGGAGCCGTTTGTACGCCAGAATTTTACCTTTTCAAAAAGGATGGTCG AAGACCATTTGAGCTGGTTTATCATGGTCAGTTTGATGATTCACGGCCAAGTAATAAAACACCAGTCACTGGAAGAGACT TGAGCATGGCAATAGATTGTGTTCTGAGTTGCCAGCCGGTACCATCAGAGCAGAAACCGAGTGTTGGATGCAGCATAAAG TGGCACCCAGAGAATAAGTTTTGA
Protein sequence (LotjaGi1g1v0275800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSLTLRMCSVGSPFLQLGSTSTAQACSISKLGFQFHPLRFQLNRNSSPTRFLIRAARTESKGVTLGFRAPQFQLPEPLTG KVWTLEDFEAHPALLVMFVCNHCPFVIHLKKDIVKLTKFYMKKGLAAIAISSNSVATHPQDGPEFMAEDAKLFDYPFPYL YDESQDVARDFGAVCTPEFYLFKKDGRRPFELVYHGQFDDSRPSNKTPVTGRDLSMAIDCVLSCQPVPSEQKPSVGCSIK WHPENKF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 25 | 25 | - | – | |
| Phobius | 1 | 7 | 7 | - | – | |
| ProSiteProfiles | 1 | 26 | 26 | 5.0 | – | |
| SignalP_GRAM_POSITIVE | 1 | 25 | 25 | - | – | |
| Phobius | 8 | 17 | 10 | - | – | |
| Phobius | 18 | 25 | 8 | - | – | |
| PANTHER | 20 | 245 | 226 | 4.8E-133 | – | |
| PANTHER | 20 | 245 | 226 | 4.8E-133 | – | |
| Phobius | 26 | 247 | 222 | - | – | |
| Gene3D | 57 | 247 | 191 | 1.4E-51 | ||
| SUPERFAMILY | 62 | 246 | 185 | 2.98E-42 | ||
| ProSiteProfiles | 63 | 223 | 161 | 12.535 | ||
| CDD | 66 | 241 | 176 | 3.02154E-96 | – | |
| Pfam | 66 | 186 | 121 | 3.3E-13 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Antioxidant activity | Inhibition of the reactions brought about by dioxygen (O2) or peroxides. Usually the antioxidant is effective because it can itself be more easily oxidized than the substance protected. The term is often applied to components that can trap free radicals, thereby breaking the chain reaction that normally leads to extensive biological damage. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Cell redox homeostasis | Any process that maintains the redox environment of a cell or compartment within a cell. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi1g1v0275800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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