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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0277100 |
| Transcript ID | LotjaGi1g1v0277100.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Hexosyltransferase; TAIR: AT5G53340.1 Galactosyltransferase family protein; Swiss-Prot: sp|Q94F27|B3GTB_ARATH Hydroxyproline O-galactosyltransferase HPGT1; TrEMBL-Plants: tr|G7J676|G7J676_MEDTR Hexosyltransferase; Found in the gene: LotjaGi1g1v0277100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:67825843..67832554) extracted from Lotus japonicus Gifu genome v1.2.
TCTTTCTCTGGGACTAGGACTACACCATTCTGTCTCGTTGAGCTTCCGTCTCTCGTATGCTACTGGGTGTCCCTCCTGGA TCAAGACTCTTCCAAATTCCAATGGTATAGTCTGATGCTTCAGTGTGCACTTCGAAAGGTACAAATATAGTCTGACAACT TCAATACATGTTGTCATTTCGTGGGTTTTGTTTCGCACGGTATAGCGCTACTCTCATTTTTTCTTCATCGGTAAATAGCA CTACTTTTTAACTTAAAAGTGTCCTTGTATGATGGTTTAAGTGGTAGGAGCTGGGGATATATGAGTTGGGTAGGGAAGGT TCAGAGATCAAATCTTGGCGGATGCAATTTATCTTTCCGATCATAAAAAATATTTTTTTGTATTGTCATATGCTGAATCC CGAATATAGGGGTAATTGATATACTTATCCCTAAAAAGAAAGAAAGAAAAAAACTCACTCACTTACCCAGTGGTTGCTGC TGGTGGTGGTGGTGACTGGTGAATTGTCTCACCAGCACAAACTTTGCTAACTTTGCTTCTTCCGAGTTCTCTCTGCAAAC CGTTTTCGTCGATCATTTGCAGTTCAAAATGCAAAGCAAGAAGGGATCGAGCCATAGACTGAGCAACATGGCTCATCGAT CCCGCATATCTTCACTTCTCATCTCCATGTTCGCCACTTTCGCCTCCATCTACGTCGCCGGAAGGTTAGCTTCCTTCCTT CATCTTCTCTCACGCAGAGTACAATTTTCTGTACTTGATCTTAATTTTCTTGTTCAGGTTGTGGCAGGACGCACAGCACC GTGTTTATCTCATCAAAGAACTCGATAGAATCACTGGCCAGGTCACTCCCTACTCTCTCTCTCTCTCTCTCTCTCTCTTG ATTCGTCCTCACTTCAATTTCAATCACGCTTTTTTGATCGCTTCTCACTCTCTTGCACCGGATTTGCTATGAATCATTGT GAATTCAGTTACTTGAAGTTAGGGATCCGATCTTCGAACTGTGAATGCGTTTTCCTTGTTTAGTGTAATTGCAGTATCAA TATTGTTGCATTTGAGTTTGATCTCATAGTATGATTTTGAGAAATAGTTTATTTCGTTGCTGAATGACTCACTGTCACAG TAGTTTACTTGAGCAAAGCTATGTGGCGCGATCAATTCGCAGATGAAACCGGCGAAAACCACATCCAATGGCTTAAGTTA AATAAGAAATTGACAACACAGGGATAAAATTGCAAGCTGAAACTTAAACACAGGGATATATACTTAAGTCGTGAATGGAA TCCATCGTGGTATTTAGTTTTTTCCTATTTACTTTGACCTATTTGAGTTGAGATCACTCTGTCAGGGACGTATATATATG TTTGACACATTAGGATATGGACATGTGTTTCTACTTATTTTTCTGGCTAAGTTAACCACAAGATTCTTACTTATTCTAGG GACAATCTGCTATATCAGTGGATGATACATTGAAGATCATAGCCTGCAGGTGAATTAATTTTTCTTGATAGAAAATTGCA AAAAGTTATTGATTACTATTTCATTTTTTTTTTTATCTGCTTTTGTGTTGATATAAGCTTCTTAACTTCTTTCATGATCG TACTGTTTAATTATGTGATCGTTCAGGGAACAACATAAGAAGCTTGAATCCCTTGAGATGGAACTTGCTGCAGCTAGGCA GGAGGGTTTTGTTTCAAAGCCCTTGATACAGACTAATGGGACTTACTCTGAGAGAAGGCCCTTGGTAGTGATGGGTATAC TAACAAAGTTTGGCCGCCAGAAGAATAGAGATGCAATTCGCAGGGCATGGATGGGAAGTGGTAATTATATTCTTTGCTTT CTCTTGCTCAGTGATGAAAGTCTGTAACATTGTGAATAACCCTGCCTCAAATATATCTAATCTGAGTCTTGAGTATACAG TTACGTATATAGTCATTTAAAATGAACAATAAAACAGAAAATATGAAACTTTATGTAAAGAATGCTTAGTAAAGCCTGAA CTCTGAACACTTAATATATCATGATGCTATATGGAAAGAAAAGTTCCACAGGGAAATCTAATGAATGTGTAGTAACCAAT CAAGAGAGGACTGATAGGAAAACATGGGTATGGCCGTACGGGTGAAAATACATGGGGAGGTTTGAAAATCAATTTACACT CTTTGTAGTATTGTATAGTTTCGTCCTTCAAATCTTTGTGCCATCAAGTGTTTTTCATCACTTATTACTTACATCATGAG CTGATGCGAGTACAATAATAAAATTATGGTCTTTTTTTCATTACAGCTGCACGTCACCCATTGATAATGAGTTAAGGTAC AGATAAAAAGACATGAGGACCTTGGCATTTTTAGTTTCCTACCTCTATGGAGAATGCTTCTCTCTTTGATTTCCATACTA GAGAGGAATCAGCTTCTTCTTATTATAATATTTTAATTCCTTTGATACCTGATATCTGATATTAAATAAATAAAATCAAA TGTAACTCTGTTTTATAGTATATTGCGTTCAATGATTTATTTCATGGATCCTGAACTTAGTTATTTCTTTGGTTCATGAT ATATTTAACTTTCTAGTGTATTTTGGATTGTTTGTTTACAGCTTTTTTATAAAATGGGTTACAGCTTTTTGCACTAAGAT TGTGGTTTAGAAGAGGTTTTAATTTTAAAGCACTATATTTGTAGGTACAGCTTTGAAGAAAATAGAAGATGGAAAGGGCA TTGTTGTGCGATTTGTTATTGGTAGAAGGTTTAAGTTCTTACTTTAGACTTGTTGGGGTTGGGGGTGATTCCGTAGGAAC CATCACTTATGAATTACGAATGACTTTGCAGTTCAAATCGCGGGGACAGTCTGGATAAAGAGATTGATCGAGAGAATAGG CTGAATAATGACTTCTTAATTCTTGTATGTTTGACCAATTTATGAATTTTATTCCTTAATGTGCTTACAAACTTTCTATA TTATCCAGACAGAAAATTTTACAGGATTTGATTTTATACTTATATCATTTGGCATTCACTTTTCTGTAAAAAGCAAGTAA ATTTTCTCATTCTGAATTTGACCTGAAGCTTCCAGAACACTGTTGCAATCAGTTTGTCAGCAGTTTCAGAAACCACTGTT GTGTTTTGATAAATAGTTTTAACACTGAGCATTTTATATTTTATTCTTCTAGTTCCAATGTTAAAATTGCACTTGTTGTA TTGAAGCATTAGAAAGCCAAATACTGATCATATTTGAGATGAAATCAATTTGAATGGTGTACTCATTGTGTTTCTTTAGA GTAGTTTAAATTAGCAGGCAGATATGAGGTTAAAAGTAATACATTGGCACTTATAGTTGCCTAACATCGTTAATTCTTAG TTCTTACTGCTTACATAACGTTTGTGATTTGCTTCCTCTGAGTGGAGCAGGTTCAAGAGCATTAACTTGTTACCTCACCA CCTTCAACAATTATGTTGGCAGGATGATCATGTGGAAGAAAATGCTGGATACCCAAAGAAGGCTAAATTGTTCTTTGCTC ATGCTGCAGACAAATGGGATGCGGAGTTTTATGCTAAAGTCAATGATGATGTTTATGTAAATATTGGTTAGTTTTTCTTT GACTGGTTGAGATGATAACTTTTTCAATGCAATTTACCTATTATTTCACTGTTGTTGTTGTAATATGTTCCTTTTATTTG TTAATTGAAATCCACTGCTAAATCATTCCATGTTTTAGAGAACTCCATTGTTGCAGATGGAAAATGATCTGCTTATAAAA AAAAGATGGAAAAATGATCTTATGACATTGATTTTCTGGTCAGCATATAGAAAGTAGTGGCAATCAATGATCATTTATTA AATTATGGATAATTTTACCATTTTTTAAGTCCTAGTATAGCTCATGTTGATGGGTTTCTAGGAAATAGCAGAAATCCCTG AAAATCACTTTTTCTCATAAGCTACATTTTGAAGCTTCTTAAAAAACCCACTGTGATTGAAGATGGAGATGAAGATTGGG AATCAGGTTTTGAATTTTTAAGGACAATATTATCCAATATGATTTTTCATATTTACAACCCCCGTCCTCACCTCTATGTT CCTCTCTCCTTGATAGTTCCTGGAAATTCTCTAACAATTTCTCATGGATTCCTCTCTGCATCTTGACTTGGAATCTTAGC TAGGTCCATTTATTCTTCAATTTTTCAATGCCCTATCTCTATTTTTGTTTTTCCAGCAGCATATTTTTTTATTTGACTTC TGCTTTCTTTGCCATATGTTTGGTTGCTTTTCCTAGTCATGCCTTTGTTTTGAAAATTGTCGTCTTCTTTTCCGAAAGAG TGAAAGTATTGAATTTTTATTGGATTTACCTGAGATGATGTACCCATTATCCCGCAAGGAGTTGTTTACTGTATTGTTTT CTTTCGCTCGGTCGTGGTTTTAGAGAATAATCAGAGGCTGTAAGCTTGGTCTGTTAACGTACTAAATTTTTCTTAGTTAC ATGAAATTGTTTACATAGATCATCTTGCAGTTGTACATAATAAAATTTTGCATTATGGCCTTAAAGTAGCTATGGAACTG GGGGTTACTTTTCTGTTAAGTTCATCTTTAAAGCAGTTTAACTGGAAAATATCAATCTTTTGATGGCAAAGGTTTTTGCA CTGCCCTTGTAATAGGTTTCTGTCTTTTTATGGTTTCTACTTTCTAGTCTGTCCTTCGTTGCCCTATTTAATAAAATTCC AAAGAGGTTGCTTCAAATTTTCAGATGGATATATGTCTTGCAACTTAATTGATTCTTCCTTTGCAGATGCCTTGGGAGCT ACACTAGCAAATCATTTGGACAAACCTCGGCTTTACATTGGATGCATGAAATCAGGCGAAGTTTTTTCTGAGCCGTGAGC CCCTTATCTTGTTCAAACTTTGAAACGTCATTTGCTTTATGAAGAATTCATTTTATGGTTCTCATACTGGTGTCTGTGAA TTATGGCAGGAACCATAAATGGTATGAACCAGAGTGGTGGAAATTTGGTGACAAAAAATCGTAAGCCAAGAAACCAGTTG TTTCATTTGATTGAACAATTGCACTAATTTTACAGCATGTCAAACTTAGATGAATTAATCATGTATGATACAGTATTAAC CAGTTTTGAATAGCTGCATGTGGATCCATGTTGAGTCCTTGTTTATTTTTCTTGATTATCTGCAATGCTATGCGTTTGTT GATCCCATTAGTAAAAAACTGCATTATGAGTTTTGATTTTGCTTCTCCAAACAATCTTTAGTGGAGAAGCCTATTATGTT ACATTATCATACTTCTGCCAAAATCCTATGGCCTTGCAAAATAGAACTCAATGTATCATCTATCATGTGATAGTTGAGGA TTTAAACCAAGAGTTGGCCAGTTCAATATTTCGTTTGTCTGGTATTCTGGGCACAGATGTGGGTGCATTGATGTGTTTTA TGTATCACAAATACTTATCTTCATATCTATTTATCTCGTAATGATTATTAAATCTCCTGTTTAACAGATATTTTCGTCAT GCATCAGGAGAGATGTATGTCATATCACGAGCTTTGGCTAAATTCATATCAATAAATAGGTCAGATCCACTCTTTGCTTC GATTATACTGTTAGTTACTGTTCAATGCATCAATCTTGAATTCGTTTGAATTGGCAGATCTATTCTTCGTTCCTATGCCC ATGATGATGTGAGTGCTGGATCCTGGTTTATTGGGCTTGATGTGAAACATGTTGATGAGGCAAAGTTTTGTTGCTCATCT TGGTCAACAGGTCTGTCTCTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT CTCTCTCTCTCCCCCCCCCCCCCATGTTTGTGTGTTGCATGTCCACATGTGCTAGTTTAAAATTCAAGTTCATAACATAG TCTCGTAGCCACTGAAAAGACGGCCTTTGAGTAATGTGCAGAATTTACTTGACATGAATGGTTGGCATATGTGTCAAATT TAATTTGCAACTTCAAGCTAATGCAACATGGTTTTGTTTTTCAGGAGCAATTTGCGCAGGAGTTTGAGTTGATTCCAGTG CGTTCTTGTGAGAAGATTACCATCGTACCGAAGAGTCGCCCATTGTTAAAAGGTTTTCCTAAGATCTTTTCACCTTTATT GGAAGCTGAGTGATTCCTGTAGATTTTCGCTGGAAAATTGCTTCTAGATTTGAAGTCTATTCGGCAATATAGTTCCACTA ACCTGCGACCATAGTAAATTTGTGGGTTGAAGGCTTACTTGCAGTTATATGGCATGCAATATTGCAATATAGTACAGCTG ATAAAGATTTGCCTTTTCAGCCATAATATAAGTTCTATCATTTTATAGTTGATTCATTCATTCATGGGCATAAAGGAAGA TGGCTTTTCTTGTTGTAGATCCATAAATGTTACAGTGAAAGTATTTATAGGAAAGGTATTTGTACATGGCAGTGGCAGGG AATTTTGAGTCATGGTGATGCTCTATTTATAAGTAAACAGTTTCTGTTGACATTATCACACTTACATTATAGATTACGCG GGCCATGAATCAGTGCTTTAGATTCGTAAGATCTTAAAAGAGTGGCAGGGTGCCAGAATCAAGCACAGTCCCGATTCAAC AATCTATGCTGTCCCAGTAACCCACGAATCTATTTATTATATAATTTTTAAAGTGCGAGTGATGATGTTGAC
CDS sequence (LotjaGi1g1v0277100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTTCAGTGTGCACTTCGAAAGTTCAAAATGCAAAGCAAGAAGGGATCGAGCCATAGACTGAGCAACATGGCTCATCG ATCCCGCATATCTTCACTTCTCATCTCCATGTTCGCCACTTTCGCCTCCATCTACGTCGCCGGAAGGTTGTGGCAGGACG CACAGCACCGTGTTTATCTCATCAAAGAACTCGATAGAATCACTGGCCAGGGACAATCTGCTATATCAGTGGATGATACA TTGAAGATCATAGCCTGCAGGGAACAACATAAGAAGCTTGAATCCCTTGAGATGGAACTTGCTGCAGCTAGGCAGGAGGG TTTTGTTTCAAAGCCCTTGATACAGACTAATGGGACTTACTCTGAGAGAAGGCCCTTGGTAGTGATGGGTATACTAACAA AGTTTGGCCGCCAGAAGAATAGAGATGCAATTCGCAGGGCATGGATGGGAAGTGGTACAGCTTTGAAGAAAATAGAAGAT GGAAAGGGCATTGTTGTGCGATTTGTTATTGGTAGAAGTTCAAATCGCGGGGACAGTCTGGATAAAGAGATTGATCGAGA GAATAGGCTGAATAATGACTTCTTAATTCTTGATGATCATGTGGAAGAAAATGCTGGATACCCAAAGAAGGCTAAATTGT TCTTTGCTCATGCTGCAGACAAATGGGATGCGGAGTTTTATGCTAAAGTCAATGATGATGTTTATGTAAATATTGATGCC TTGGGAGCTACACTAGCAAATCATTTGGACAAACCTCGGCTTTACATTGGATGCATGAAATCAGGCGAAGTTTTTTCTGA GCCGAACCATAAATGGTATGAACCAGAGTGGTGGAAATTTGGTGACAAAAAATCATATTTTCGTCATGCATCAGGAGAGA TGTATGTCATATCACGAGCTTTGGCTAAATTCATATCAATAAATAGATCTATTCTTCGTTCCTATGCCCATGATGATGTG AGTGCTGGATCCTGGTTTATTGGGCTTGATGTGAAACATGTTGATGAGGCAAAGTTTTGTTGCTCATCTTGGTCAACAGG AGCAATTTGCGCAGGAGTTTGA
Protein sequence (LotjaGi1g1v0277100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLQCALRKFKMQSKKGSSHRLSNMAHRSRISSLLISMFATFASIYVAGRLWQDAQHRVYLIKELDRITGQGQSAISVDDT LKIIACREQHKKLESLEMELAAARQEGFVSKPLIQTNGTYSERRPLVVMGILTKFGRQKNRDAIRRAWMGSGTALKKIED GKGIVVRFVIGRSSNRGDSLDKEIDRENRLNNDFLILDDHVEENAGYPKKAKLFFAHAADKWDAEFYAKVNDDVYVNIDA LGATLANHLDKPRLYIGCMKSGEVFSEPNHKWYEPEWWKFGDKKSYFRHASGEMYVISRALAKFISINRSILRSYAHDDV SAGSWFIGLDVKHVDEAKFCCSSWSTGAICAGV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 32 | 32 | - | – | |
| Phobius | 1 | 48 | 48 | - | – | |
| PANTHER | 11 | 348 | 338 | 4.0E-174 | ||
| PANTHER | 11 | 348 | 338 | 4.0E-174 | – | |
| Pfam | 28 | 106 | 79 | 1.6E-8 | ||
| TMHMM | 30 | 52 | 23 | - | – | |
| Phobius | 33 | 44 | 12 | - | – | |
| Phobius | 45 | 48 | 4 | - | – | |
| Phobius | 49 | 353 | 305 | - | – | |
| Coils | 86 | 106 | 21 | - | – | |
| Pfam | 140 | 335 | 196 | 1.3E-35 | ||
| Gene3D | 203 | 329 | 127 | 6.5E-6 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Protein glycosylation | A protein modification process that results in the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi1g1v0277100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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