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Field | Value |
---|---|
Gene ID | LotjaGi1g1v0279300 |
Transcript ID | LotjaGi1g1v0279300.2 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Activator of 90 kDa heat shock ATPase-like protein; TAIR: AT3G12050.1 Aha1 domain-containing protein; Swiss-Prot: sp|O95433|AHSA1_HUMAN Activator of 90 kDa heat shock protein ATPase homolog 1; TrEMBL-Plants: tr|A0A0B2SFA2|A0A0B2SFA2_GLYSO Activator of 90 kDa heat shock protein ATPase like 1; Found in the gene: LotjaGi1g1v0279300 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:68201638..68202866) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCGAAATACGGCGAGGGCGACAAACGGTGGATCGTGGAGGAAAGAACCGACGGCACCAACGTCCACAACTGGCACTG GTCCGAAACCAACTGTCTCGAATGGTCCAGAACCTTCTTCACCAACCTCCTCTCCGGCCTCACCATCCTCAACGGCGAAG GCAACCTCTTCATCAGAACGACGTCGCTCCGCACCCTCGACGGCGAGGCCTACGTCAACATTCGCAAAGGGAAGATCATC CCCGGTTACGAGATCAGCGTCACGGTTTCCTGGGAAGGTGAGGCCAAGGATTCCGATGGTAAATCGCTGCTCAAGGTTAC CGGCGGCGTTGAGATTCCTTATATCTCCGACGAGAACGCCGATGAGGATCCTGAAGTTAGGGTTACGGTTAACGATGAGG GGCCAATTGGGAGGAGGATCAAGGAGGCTATGGTTTTGAAGGGGAAGCCGTTGGTTGTGGAGAAGGTGAAGAGTTGGGTG CAGAGTATGGCGAAAGGGGGTCCTGTTAAGGAGGAGCTGGAGACGAAGAAGGTGTCGCCGCCGCAGCAGAATCAGAATCA GAAGCCGGCGACGGAGGGTTCTGCTGCGCCGACGAAGGAGGTGAAGAAGGGGGTGAAGAGTATTAGATTGACGGAGAGGT TCAATTGCAGGGCGAGGGATTTGTATGAGATTTTGATGGATGAGAATAGATGGAAGGGTTTCACGCAGAGCAATGCGAGG ATTAATAAGGAGGTTGGTGGGGATTTCAGCATTTTTGATGGGTCGGTGACAGGGACTAATTTGGAGTTGAAGGAAGCGAA GTTGATTGTGCAGAGATGGAGATTTGGGAGCTGGAATGATGGGGTTGTTTCCACGGTGAGTGTGGTTTTTGGTTGATTGA GCTGAGTGTTTGAATGGGTTGGAAGTTTGAATCAGTGTTTTTGATGAGTGGTTGTTGGTTTTTTGCAGGTGAGGCTTGTG TTTGAGGAACCTGAACCTGGTGTTACTGTTGTTAAGCTGACACATAGTGATGTTCCTGAAGAAGATAGGTGAGTGTTTGG TTTGATTGTTACTTGTTGCGATGATTGGTGTTGTGGAATGGTTGGATATTTTTCATCTTGTTTTGTTTTACTGAGATGGT TGCTTGTTAATGCAGGTATGGGAATGCCACTGTAGTGGAGAACACGGAAAGGGGGTGGAAGGATCTCATTTTCCAAAGGA TACGTGCAGTTTTTGGTTTTGGAATTTGA
CDS sequence (LotjaGi1g1v0279300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGAAATACGGCGAGGGCGACAAACGGTGGATCGTGGAGGAAAGAACCGACGGCACCAACGTCCACAACTGGCACTG GTCCGAAACCAACTGTCTCGAATGGTCCAGAACCTTCTTCACCAACCTCCTCTCCGGCCTCACCATCCTCAACGGCGAAG GCAACCTCTTCATCAGAACGACGTCGCTCCGCACCCTCGACGGCGAGGCCTACGTCAACATTCGCAAAGGGAAGATCATC CCCGGTTACGAGATCAGCGTCACGGTTTCCTGGGAAGGTGAGGCCAAGGATTCCGATGGTAAATCGCTGCTCAAGGTTAC CGGCGGCGTTGAGATTCCTTATATCTCCGACGAGAACGCCGATGAGGATCCTGAAGTTAGGGTTACGGTTAACGATGAGG GGCCAATTGGGAGGAGGATCAAGGAGGCTATGGTTTTGAAGGGGAAGCCGTTGGTTGTGGAGAAGGTGAAGAGTTGGGTG CAGAGTATGGCGAAAGGGGGTCCTGTTAAGGAGGAGCTGGAGACGAAGAAGGTGTCGCCGCCGCAGCAGAATCAGAATCA GAAGCCGGCGACGGAGGGTTCTGCTGCGCCGACGAAGGAGGTGAAGAAGGGGGTGAAGAGTATTAGATTGACGGAGAGGT TCAATTGCAGGGCGAGGGATTTGTATGAGATTTTGATGGATGAGAATAGATGGAAGGGTTTCACGCAGAGCAATGCGAGG ATTAATAAGGAGGTTGGTGGGGATTTCAGCATTTTTGATGGGTCGGTGACAGGGACTAATTTGGAGTTGAAGGAAGCGAA GTTGATTGTGCAGAGATGGAGATTTGGGAGCTGGAATGATGGGGTTGTTTCCACGGTGAGGCTTGTGTTTGAGGAACCTG AACCTGGTGTTACTGTTGTTAAGCTGACACATAGTGATGTTCCTGAAGAAGATAGGTATGGGAATGCCACTGTAGTGGAG AACACGGAAAGGGGGTGGAAGGATCTCATTTTCCAAAGGATACGTGCAGTTTTTGGTTTTGGAATTTGA
Protein sequence (LotjaGi1g1v0279300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAKYGEGDKRWIVEERTDGTNVHNWHWSETNCLEWSRTFFTNLLSGLTILNGEGNLFIRTTSLRTLDGEAYVNIRKGKII PGYEISVTVSWEGEAKDSDGKSLLKVTGGVEIPYISDENADEDPEVRVTVNDEGPIGRRIKEAMVLKGKPLVVEKVKSWV QSMAKGGPVKEELETKKVSPPQQNQNQKPATEGSAAPTKEVKKGVKSIRLTERFNCRARDLYEILMDENRWKGFTQSNAR INKEVGGDFSIFDGSVTGTNLELKEAKLIVQRWRFGSWNDGVVSTVRLVFEEPEPGVTVVKLTHSDVPEEDRYGNATVVE NTERGWKDLIFQRIRAVFGFGI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 339 | 339 | 3.3E-173 | – | |
PANTHER | 1 | 339 | 339 | 3.3E-173 | ||
Gene3D | 15 | 176 | 162 | 3.6E-34 | ||
SUPERFAMILY | 20 | 165 | 146 | 6.02E-36 | ||
SMART | 29 | 165 | 137 | 2.0E-34 | ||
Pfam | 29 | 164 | 136 | 7.7E-32 | ||
MobiDBLite | 167 | 202 | 36 | - | – | |
MobiDBLite | 178 | 193 | 16 | - | – | |
Gene3D | 205 | 341 | 137 | 1.9E-32 | ||
CDD | 207 | 340 | 134 | 4.97921E-51 | – | |
SUPERFAMILY | 207 | 341 | 135 | 1.51E-22 | – | |
Pfam | 218 | 338 | 121 | 1.1E-13 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | ATPase activator activity | Binds to and increases the ATP hydrolysis activity of an ATPase. | ||
Molecular function | Chaperone binding | Interacting selectively and non-covalently with a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport. | ||
Molecular function | Hsp90 protein binding | Interacting selectively and non-covalently with Hsp90 proteins, any of a group of heat shock proteins around 90kDa in size. |
Expression pattern of LotjaGi1g1v0279300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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