Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0297100 |
| Transcript ID | LotjaGi1g1v0297100.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | En/Spm-like transposon protein; TAIR: AT4G10840.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q9XEC1|Y4443_ARATH Probable transposase-like protein At4g04430; TrEMBL-Plants: tr|K7LAA6|K7LAA6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0297100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:71956506..71965013) extracted from Lotus japonicus Gifu genome v1.2.
AAACATTGAACCCTAACTTTTTCTCTCTACTCCTTCGACCTCATCCATTGCTCACCGACGCGTTTCACTCCATAGCTCTC CACTGCAGCTGCAACGTCCACCGTGGCTAAAGCGTCCGCCGCGGCTTCTCCTCCGCAGCTTTGGGTTAGATTTCTCGGCC ACCACCGAGCACCCATCGCGCTACCGCTCTGCCGCTCGCATTTCCGCCGTTGCCGCCGTTTACGTCGTTGCCGCTTCCGT CGTCGTCGGTGTTTTCTGCTCGTCAAATTTGGAACGAAGGAGTAAGCAGCAACCCCAAACCTTAACCCTAACTTTGACCT TCCAATTCTTCCTCTGCTTCTTCCTTCAGGTACTTCGCTCTTCAATTCCACTTTTCTTTCGTTGTTCGATCTTTCATTTT GATTCTTCTCGGTTATTTCATTTTTGCAATGTTTTATTGTTTCTTTCTCAATTGTTGATGGGATAACAACAATTGACCAT TTTATTTGATGCCGATTTATTCTGAGATTGTTGATTATTGCTTGGTTTGGGGTGGATTGCTGCTAAATTTGTGAAAATTT TGTTTCCAATTTGATTTCGATGTCTCTTTGTTTTAAGAGACGCTTTTGATGAGAAAATGAAGTGTTCATTGATGTAGAAA TAATTTTGTTAACATCTTCAGGTTATATGAGATGAAACTCTATGTGTAAAATTAAAAATTGTATCCAATTTCAAAAGCTC CTCCGCGGCTCCTCCTCCGTGGCTCCTCCTCCGCGGCTTCTCTCTTATTCTTCATTGGTAAGCTCATGATATACTATTGT TGTTACAGATTCACAATAAAGTCAGTCTTGCAGGATTACATGATAAAGGTTGAATTGCAAAAACAGTTTCTGCTTAATGA TTTGTTGTGCATTTGTTTGCTGTAAAGTTTGACTATCACATATTTGCAAAATGGATATTGTATTCATGTACATTTTTAAA TCCCCCCTGCCCCCCCTTTACTCATATATTCTGCTTCTTAATGGGGTATTGCTTTAATTCCAGGTAAAACAGCAATTTTG GAGGTTGAAACAAAAAGTTATGAGAAAGAATCTGGTGATTTATTATGCATGAACAGGTACAACTGAAAACATTCTTTTAA TGGTTTGTTTCCACCATCACACTCAAATAGTAAGTTGCTGCAGGTCCACTGTCTATCTACGTGGTGCTGGTGGCTTCTGA AACTCGTCTAAACCATTTTCTTACTCAAACTACCCCTTGAACCGGACTTCAGCTGTAAAAATTCCTGATAGTAAACCCTT TTCAGTGTTTGAAGATCATACCCAAGCATCTCAGGCATGTTATAATTATTCAATATTGTTTGAAATGTAGATTACATTAT GTGTGATCCCCCCCCCCCAATTTTTTTTTATGTACTTTATTAATTTTCAGTCTTTAGCCTTGTATTTTAGATATTGGTTG TCCACTGTCTTGGACTATAACAGTCATCCATGAAATCTATTTTTGTCAACTAAAAAGAATTAACTGTTCAGGAAGTAATG TGGCATTTATTTTTTCCCCTTATGGTCATTGATATGCTTAATCTGCTACCATTATATTTGTCTTCCAACTTTGAAAGAAA CATGTCTTGAGCTCTAGTTATTGCAGTAAAGCAATAAAGTGACCAGTAGGTTGATCTTGTAGAACAAGTTGAAGCAATAA GGATTCTCACCTTTTTTGCAATCTCTTCTTGCTGTAGTCCTCACTTTTTTCTAGCTAGTCCTCACTTGCAATACTTGCAA TACTAATTGAATTGAATGATGTGTTCACCATTCACTTATATATTTTTTCTTTAAGCTTGTTGAAATGTCTCAAGTTCGTG TTAAACGAAAGAGAGTGGATTGGAGCCTTGCTTAACAAACTGTTGAACCTGTTCTATGTTATATATCTGTTGAAGTAAGA TGCTAGACTCTGAATTTGACTTGTTAACTTTGATTTCTATGCATATCTAAGAATCAAAAAGCTTAAGTTAATTTTTTGTT CTTTAATAAAAAATCAAATGAAGTTTTCTTCAAAACCAACTATTCTTTTTGTGATTTTATTCTTCATGCTGAGTTAATCT AGTTATTTGTATCCAGAAAGAAGCTATATATGGACTGACAGAGGTTTCAAGGGAGGAAGTAAAGAGTGCACGCCTAGTTG CTAATCTTGGTTGTTATCCAACTTCCATTCAACTTCCTCTTGTCCCACTGATAAAGGTTAGGAATGTTTCTTTGCTTTAT AAAATGCACACTCTGGATAATAGAGTGAGTGACTTTTCTACCTCTTTTTATTTTGGTAGCTTCTTAAGATGAATAAAGTA ATATACATTTATGTTGTGTTCCAATGGTTCTTTGTCTGTGACCTGTATCTACTAGTCCTTGCTTTGTATGAAACAACTTG GGCTTTTGCTTCTTATGCTTTGACATATTTTGAATCTATATCCCCTCTAATGTGGTGTTTGATTCACAGTGACTCATGCA TGAATATAGTTATGCTGATGATCATTTGACATTGGCAAGTTATTTTTTATTTGAAAATTCTGCATCTGACTTATTTTTCA TTTTTACCTCGTGAAGTATGACTTTAAAATGACTAGATATTTCGATTTCATATAAGGGTAGTTGTTTGGACTTTTTTCAA TTAATTCATCTTATTAGCTTATTTATTGTTCCTCCATTCTAGTGTAATGGTTTTGCTTGATGTGACAGAATATGGACATT TTTCAAATCCGTGGTTGGATGTATAATAGACTTATGCCTGACCAATGTGGCGTTACAAATGAATTTATGAATGGAGTACA AGAATTTATTGCTTTTGCATGCCAAAAAGAAGACTCAAGTAGTGGAAAAATTAGATGTCCTTGCCTTAGATGCAGAAATC TCAAGTATTTAGATCCTGAAGAAGTCGAAATTCACCTTTATAGGAAAGGATTTGTACGTGATTATTGGTATTGGACATGT CATGGAGAAAGTGATCCAACTTTATGTGTAGCATTTAATACTTTTCAAAGTACTAGTGGCATTGCACAAGAGCGTCCAAG TACTAGTTGCACTAGACAGGAGGGTCATAATGAACAGTTTGATAGATTTGAGAGTATGGTTTATGATGCTGTTGATCCGG AGTTTCGAATGCATCCTGATCAACAAACCGATGAAGCTCCAAATAAAGATGCTCAAGATTTTATGATTTACTACACGCAG CCCAAAAGCCACTGTGGTCGGGATGTAAACACACAGAACTATCCTTTGCAGTTAGAATGATGACAATTAAATCAGAGGGA AACATTTCTCAACGATCTTTCAATGAGACTATGTCGCTCATCAAGGAGTTACCTCCTGAAGATAATGTTATTCCTGAAGA TTTTTATCAGACAAAGAAAATTGTGTCAAAACTTGGTCTTACTGCAAAAAAAAATAGATTGTTGTGAACAGGGTTGTATG TTGTTCTACACTGGTGATGATATGCAATTAAAGGCATGCAAGTTTTGTGGTAGACCTCGTTATCATCAGAAAAAGGTTGG TAGGGATAAATACAAGGAAGTTCCTGTGAAGCGAATGCATTATTTACCTCTTATTCCTAGACTTAAGAGATCATATGCCT CAATGAGTTCTGCACCACACATGAGGTGGCATCATGAAAATAGGCGACAATCAGGAGTGTTATGTCATCCATCAGATGGA GAAGCATGGAAAGAATTTGATCGAAAAAATCTTGATTTTGCAAAAGAACCTAGAAATGTGAGGTTGGGGTTATGTTCTGA TGGTTTCATGCCATTTGGTAATGCAGCAAAACCTTATTCTTGTTGGCCGGTAATTGTTACTCCTTATAATCTTCCTCCTG AACTATGCATGACAACACCCTACATGTTTTTGACATTGATTATTCTTGGGCCCAATAATCCAAAAGAAAAAATTGATGTG TATTTGCAGCCACTGATAGATGAGTTGAAATTGTTATGGAATGAAGGTGTGCTGACATATGACATATCAAAGAAGCAAAA TTTTATGATGAAAGCTGCATTATTGTGGACTATTAATGATTTTCCTGCATATGGTATGCTATCGGGTTGGAGCACTGCGG GAAAATTAGCATGTCCATATTGCATGAATCAATCAAAGGCTTTCTGGCTGAAACATGGTGTTAAATGTTCTTGGTTTGAT TTCCACCGTCAGTTCTTGCCCATGGATCATGCATACAGAAGAAACAAGGATGCATTTTACAAGAATTGAGTCGTGACGTC TATTGCTCCACGAAGATTAACAGGGGATCAAATGTGGGAAGAAGTTTCTAATGTACCAAAAGTAACTGAGACTCAACCTT GTGTTTGTCCTGGATATGGTGTATCTCATAATTGGATAAAACAAAGCATTTTTTGGGAGTTACCATATTGGAAGTCCAAC TTAATAAGGCATAATCTGGACATGATGCATATTGAGAAAAATGTATTTGAAAATGTCTTTAATACGGTGATGGACATCAA GGGCAAGACCAAAGATAATGTTAAAGCAAGAATGGATTTGAAAGAGTATTGTAGGCGAAGGGAACTAGAATTAGTAGAGA ACCCTGGTGGAAAACCTTTAAAGCCTAAAGCAAAATTTGTTTTGTCCAATGAGCAGCAAATGGCAGTTTGTAAATGGGTT AGTGAGCTGAAAATGCCCGACGGATATGCCTCAAATTTGAGTAGATGTGTAAACATAAGGGAAGGGAATTTCATTGGAAT GAAAAGTCATGATTGTCACATCTTTATGGAGCGTTTGTTGCCAATTGCTTTTAGTGCACTACCACTTCAAGTGTGGAAGC CTATAGCTGAGTTGAGTAAATACTTTAAGGATTTGTGCTCAAGTACATTGCAATTGAGTGACTTGTTGTTGATGGAACAA AATATCATCATTACAACATGTAAGTTGGAACGAATCTTTCCACCAGGTTTCTTTAATTCAATGGAGCATTTGCATATTCA TCTAGCTTATGAAGCAATAGCAGGAGGTCTCATTCAATATCGATGGATGTATCCTTTCGAGAGGTAAATATTTACATATT ATAATGCACAAGTATTAATTGGTCGTATTAATTATGAGTTAATGATATTTTATCATTTTAGGTACTTGGGGAGGTTGAAA CGAATGGTTAAAAACAAATCACGGGTAGAAGGGTCTATTTGTGAAGCATATCTATGTCAAGAGACTTCTCATTTTTGTTC ATACTACTTTGAGTCTCATGTCCAATCAGCGAGAAATAGAGTTGGTCGAAATGACGCTGGAAGTCATGATGATGTAGATC CACAAAATTTATCAATCTTCAGTCATCCTGGTCGAACAGCTGGAACTTCAAGGAGTCGATATTTAACTGATATGGAATCA GCTGCTGCCCATTTGCATATCCTACTTAATTGTGACGAAGTTAAACCATTCATTGAGTACGTTCGTTTATTGTAGTTTGA GTATTCTTTTAATTCAATAATATATTTACTAATATAGTTATTAATGTCAGACGCTTTGAGCAACATTTGGAGGCATCCTT TCCTAATATCTCTCAAGCTGATATTGATGGTAGGATTGCATCTGAGTTTCCAACTTGGTTTCGATCTTATGTGAGTGTTT ATAGTTTTTAACATTAATATTACATGAGTTAAAGTTATACTTGTGAAATATAAACTCTAATAGGTATATACTTGATAATG ATAGGTTCATGATATAAATAACATGGTAGACGATCAATTATTGCATCACTTAGCATGGGGTCCTAAGAGAAAGGTGGAGA CTTGGCCTATTTACTTTGTCAATGGCTTTAAGTTTCATACAAAAGAGTGGAGTGTCAACAAGAAAACCATCAATTCTGGA GTTTGTGTTGAAGGAGATGATGAAGAGCATGAACATTATTATTATGGTACTCTTAAAGAGATTATGCAACTACAATACCC AGGTGAACCAATCAAAAAGATAGTTTTATTTAACTGTGAATGGTTTGATGTTGTCATCAATCGTGGTATGAAGGTTAACA AAGAATATGACATTGTGGAGGTGCACCGTTCTAGAAGGTATTCAAAATATGACCCTTTCATATTTTCAACAAATGCAATT CAAGTTTACTACATGCCTTACCCAGAAAAAATAAAAGAAAAGGTTGATTGGTGGGTTGTTGTTAAAACCAAACCAAGGGG TACAGTTGATGATCGATATGCATTAGAGGTTGCATATCAAGATACAATAGCTCACGTTGATCCGGTCTCAAATGAGGAGC TAGATGGCCACTTGAGAGATGATGATGGTGTATATGAGGAAGTGGAAATCAATGATACTAATGATGGAGAAAACAACGAG GTAGAAGAGAATGAAGATGAGGATGATTTTGAGGATGAGGATGAGGATGATTCTAAGAATGATTGTGAATTGTTTGACCA ATATATATCTTCTGATGATGATTAAAATGTAATATTGTGTTTTCTTTATAAAAGGTAACAAATTGTACTTATATTGATGT TGTTGTTAATTTTAATTTTTATAAATATATTTAAGAAATTTATTTATGTGTGTATTGCAGATGTCAGATCGTGGTCGGGG AAAATCCAAAACTCTTAGAGGACGTCCAAGACCGTTATCACACACTCACAATGATATGTCATCACATGTGGCACATCATG CCACTCCACCTTTAGCACAAGAGGATTCAACCAATGTCCCACCAACTCAATCACCGCCAAATGTTGTTGCTGCCACTCCA TCACTTAGGACATCTCATTCAACCCCTTCACCCCGTAGTTCTGAAACGGGTGATGAGCCTATAATTGGATCAAGTGAATC TCAAACTGTATCAGATGATGACAAAACTACTCTCATCCTTGCGGGTCAAGGGTATGCATTATTTATTAGAAGTAATTTCA GTGCATTTAATAAGTCTCTAATTGTTTACATGTATTTTCTGTAGGTTCTTACCTTCGCACTGTGCGGCTAATATCATTAC TGATATATTCAGAAGTCACTATACTGATCCATGGGCATCATGGAAGAAGATACCCAAGGACACAAGAAATATGTTGTTTG GAGAGTTCATGGTAGATTTCATATGTTAATTTTCAAGTTTGATTTATTATTTTTACATATTGCAATTTCATCTAACTTTA CTTGTATTTATTATAGAGTAAATGTTCTATTTGTCCACCCGACTATATATGGGCTAAAAAGAACTTTGAAGCACGAGGTG CATATTTGATGAAAAGTACTTTAAATAGGGTTCGTACCTCTAATACAAGACCAGATTGGCTTGGTAATCATGTATGGAAT GGGTTACGTGAGCATTGGGATAGTGTAAGCTTCAACATCAAAAGTGCCAAAGCAAAAGCAAACCGGGCATCCGATTGTGA TGGATTTGGGCAGTCCCTTCATATTGGTGGCTCTATTACACCTTCTCAGCATAAAGCAAATATGGTGATGATATTTCTCT TGTAGTCTATTCTTCTCTTAATTTAGATATAGATAATATGGTCATAATTTTATTGTACTTTATTAGATTAAAAAGACCGG AATCACTCCTACTCAGCTAGAATTGTTTCGCCAGACACACCAACGCAAGGATGCTTCATGGGTGGATAAGAAATCAGAAC ATGTAAATCTATGTCATTATGAATTTTATGCTTTACTCTTGTCGTATGTCATATAAGGTTGCCTACTGATTGTTTTGCAT GCTTTTTAAAATTCAGGTAAATCTTTTTCCTTCACGCTTTTAAGTGGTCCAATCACTATGTTTCATAAATATTGTATAGT GCTCTTGTCTTTATTGCTCTTAAATATAAGGTAGTAAGCATTATAGAGTTTGTATGGACAATATGTGCCGGTCATTTGAA GTGCTGAAAATTTTCTAAGTGTCTTGAAAAAGAGTAGTATGTTGCTTTATGTATAATTATGATTGATGTTATTGTAACTA ATTGTTGCTAACAGGCTACATTTGAAAGTACATGGGAAGATAGGACGCAAAAAGCATCTGAGCAAAATGCTCCTCCACCT AATGAGCTAGATGTGTGGCTTGAGGTAGCTGGTGTGAAAAAAGGTAGAATTTATGGATTAGGAATGGAGTCTACTGTGAT GCATAACAAATATCGTGGCTCAAGCTCTTCATCATCTGAGTGGGTACGAAGAGAAGAGTTTGATCAATTGAGGGACACAT TAGACATCACTCAAAAAATGGTACGTCAGATGATGGAAATGATGCAAACAACAGCACCAACCAATGTGCATACAGATCAC GGTGATAATTCAGATGATTTAGAGGAGTCAGAGGATGCAGATGATCTAGGTGGTTCTTGAGGGATTATTTGAACTTTATC AAACTTTGTTTTTAAGTGTAATGTAATAGACTGGTTTATGAATGTTGACTTGATGATGTTGGTAGAGTATTGTATGAGAC TACCATAGTTTATGATGATTGTAGGTTGAAGTTGAATTAGTGACTGTTTTATTGTTCCTATATTGATTGATAGATATGGT TATTACAGGGTTAAATCAGATTGGCTAG
CDS sequence (LotjaGi1g1v0297100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCAGATCGTGGTCGGGGAAAATCCAAAACTCTTAGAGGACGTCCAAGACCGTTATCACACACTCACAATGATATGTC ATCACATGTGGCACATCATGCCACTCCACCTTTAGCACAAGAGGATTCAACCAATGTCCCACCAACTCAATCACCGCCAA ATGTTGTTGCTGCCACTCCATCACTTAGGACATCTCATTCAACCCCTTCACCCCGTAGTTCTGAAACGGGTGATGAGCCT ATAATTGGATCAAGTGAATCTCAAACTGTATCAGATGATGACAAAACTACTCTCATCCTTGCGGGTCAAGGGTTCTTACC TTCGCACTGTGCGGCTAATATCATTACTGATATATTCAGAAGTCACTATACTGATCCATGGGCATCATGGAAGAAGATAC CCAAGGACACAAGAAATATGTTGTTTGGAGAGTTCATGAGTAAATGTTCTATTTGTCCACCCGACTATATATGGGCTAAA AAGAACTTTGAAGCACGAGGTGCATATTTGATGAAAAGTACTTTAAATAGGGTTCGTACCTCTAATACAAGACCAGATTG GCTTGGTAATCATGTATGGAATGGGTTACGTGAGCATTGGGATAGTGTAAGCTTCAACATCAAAAGTGCCAAAGCAAAAG CAAACCGGGCATCCGATTGTGATGGATTTGGGCAGTCCCTTCATATTGGTGGCTCTATTACACCTTCTCAGCATAAAGCA AATATGATTAAAAAGACCGGAATCACTCCTACTCAGCTAGAATTGTTTCGCCAGACACACCAACGCAAGGATGCTTCATG GGTGGATAAGAAATCAGAACATGCTACATTTGAAAGTACATGGGAAGATAGGACGCAAAAAGCATCTGAGCAAAATGCTC CTCCACCTAATGAGCTAGATGTGTGGCTTGAGGTAGCTGGTGTGAAAAAAGGTAGAATTTATGGATTAGGAATGGAGTCT ACTGTGATGCATAACAAATATCGTGGCTCAAGCTCTTCATCATCTGAGTGGGTACGAAGAGAAGAGTTTGATCAATTGAG GGACACATTAGACATCACTCAAAAAATGGTACGTCAGATGATGGAAATGATGCAAACAACAGCACCAACCAATGTGCATA CAGATCACGGTGATAATTCAGATGATTTAGAGGAGTCAGAGGATGCAGATGATCTAGGTGGTTCTTGA
Protein sequence (LotjaGi1g1v0297100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSDRGRGKSKTLRGRPRPLSHTHNDMSSHVAHHATPPLAQEDSTNVPPTQSPPNVVAATPSLRTSHSTPSPRSSETGDEP IIGSSESQTVSDDDKTTLILAGQGFLPSHCAANIITDIFRSHYTDPWASWKKIPKDTRNMLFGEFMSKCSICPPDYIWAK KNFEARGAYLMKSTLNRVRTSNTRPDWLGNHVWNGLREHWDSVSFNIKSAKAKANRASDCDGFGQSLHIGGSITPSQHKA NMIKKTGITPTQLELFRQTHQRKDASWVDKKSEHATFESTWEDRTQKASEQNAPPPNELDVWLEVAGVKKGRIYGLGMES TVMHNKYRGSSSSSSEWVRREEFDQLRDTLDITQKMVRQMMEMMQTTAPTNVHTDHGDNSDDLEESEDADDLGGS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 94 | 94 | - | – | |
| PANTHER | 17 | 264 | 248 | 4.5E-46 | – | |
| PANTHER | 17 | 264 | 248 | 4.5E-46 | – | |
| MobiDBLite | 38 | 94 | 57 | - | – | |
| Pfam | 190 | 319 | 130 | 1.9E-24 | ||
| MobiDBLite | 265 | 297 | 33 | - | – | |
| MobiDBLite | 265 | 285 | 21 | - | – | |
| MobiDBLite | 368 | 395 | 28 | - | – | |
| MobiDBLite | 381 | 395 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0297100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…