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LotjaGi1g1v0299800.1

Overview

Field Value
Gene ID LotjaGi1g1v0299800
Transcript ID LotjaGi1g1v0299800.1
Lotus japonicus genome version Gifu v1.2
Description O-methyltransferase, putative; TAIR: AT5G54160.1 O-methyltransferase 1; Swiss-Prot: sp|P28002|COMT1_MEDSA Caffeic acid 3-O-methyltransferase; TrEMBL-Plants: tr|I3SJD0|I3SJD0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0299800
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:72490351..72495474) extracted from Lotus japonicus Gifu genome v1.2.

ATTTAAACATCATGACTCACAAAACACAATACCGAAGACACATGAATCATTCATATAGGATCATCGTTGCATGAATTTAG GACCTCAATAGTTTAAGACAAAGGGATGATGACATACCTCTCTAGTATCCATTGTAACTTGACTTGATGTTTCAAGCCTT TGATCTACTTGGATGACTTAGTTTACAGGATAGTATCATCCTCTCCTTCTTCCTCAACTTTGATGAGATTTGAGATAATA GAATATCATCATCCTGTAATCATATAACTCAAGTCATATATATATATATATATAGAGAGAGAGAGTGGAGAGGAAACCTA CCCTTTCAAGTAGGGTTACAATAGTTCACATACATCATCTCATGAGGAGTCACAATGCTCTCAAACCATACTCTTTCACG ACATAGTCTGAATGGTTCCTATCCATCAAGGTTTCATTTAACCATAGGTTACATTATTCATGTATACTTAGCATATGTGA TTTCCAATATCACAAGATGAATATTCTATGAAACATCAAGATACTATTCAACCAATTTTCATAAATTAGTAGCCGACCAA ATATAGAAAATAAAATTTTCTAACATTTTTAAGTGTGAAGAAAACTTTATTGGATGGAATTTAATTAACGTGTGAACAAT GCGTATTTACTATAGGAAACCCAAAATCCTGATAGCAGGTCCTCGTTGCGGTGGTTGAGGTGGGGCATATGGACCATACC CACCAAACCTCTTTCTCCATCTTTTCTATGCTCATATATACCCACTTTGTACCTTGTCCTAGTGCACACAACAAAACACT TCTTCTAAATCAAAATCAAATCCCACTCATTCCTTTGTTTTCTCAACCATGGGTTCAACCGGTGAAACCCAGATAACCCC AACCCATGTCTCCGACGAAGAAGCGAACCTCTTCGCCATGCAATTAGCCAGCGCCTCTGTTCTCCCCATGGTTCTGAAAT CAGCCATTGAGCTTGATCTCTTGGAGTTCATAGCCAAGGCTGGCACCGGAGCTCAGCTTTCCCCAGCTGAAATAGCTTCT CAGCTTCCCACAACCAACCCTGACGCGCCCACCGTGCTCGACCGCATGCTCCGCCTCTTGGCCTGCTACAACATCCTCAC TTGCTCTGTTCGAACTGAACAGGATGGGAAGGTGCAGAGGCTGTATGGTCTTGCCCCTGTTGCCAAGTACTTGGTTAAGA ATGAAGATGGTGTTTCGATTTCTGCTCTTAATCTTATGAATCAGGACAAGGTTCTCATGGAAAGCTGGTAAATTTTACTC CACCTTATTGATCTTTCTCTATACCTTTTCTTTACTCCTATGTTATAAAACAATTGTTGAGAAGTCTCACTCACATTGAT TAGATATAGAGCTAAATGAATATTATCTTGGTTAAGGAGTTTAGGTGAAAAAAAATTGGGTTGTCAATAAAATATGAAAC CTGTTTATCATAAGTATTACTCCCTTCGTCCCTAATTATAAGCTAAAGTTGAGACTTATGTTTTGTCACTAAATATAAGC TAAAGTTGTAAAAGCTAATATTTCTTTCCATATTTATCCTTGCATTTATTGGTAGTAGAGCACTATTAGTAGTATAATGA TTAAAAAGTGCTATCTTAAATAGGGGTAGACATGGAAAGTTGTACCTTTTTTTTGAAAACCAATGCATCAATTAAGACTT TCTTAATAAGCGTGATTTTTACAACTTTAGCTTATAATTAGGGACGGAGGGAGTATTAAAATATTATTAGTCCACTAAGT AATTTAACCAAATTTTTTATCTTTAGTCATTTAGACAATTCCATTTTTTAAAATTTGTTTATTTTTTTATCTTCCATAAA AATTGTTTCTTGCTTATGATTTAATTGATAAATTTAAAGTATTTTTAAGCAAGAAACATTTTTAATTAATTAGCTTAATG GGAATGGGGTGGCGTAAGCTTTTGGATGTAAAAAGTCCAACCGTTTTGATTATATGGAAGACTATTGTTGTCCACGAACA CTGAAAGGTCAGAGCCTCAAATATGAAATCACAGCAACTGGGACCCCAGTGTGACTTTCACACTTACCACTTTTTTTTTT GGTCGAATCACCTACCACGATGAAGTGTGAACCAATCCTTTTGTGTTGGGCTTCCAATATGAACAGAAGGACAATTCCAT AATGGTCCAACTTTTTTTATCAACTTAAGAATATATTCGGTTATTGACAAAAAAAAAAAGACTATATTGGGTTTTCCTTT TACACTTGAGTTGAGTAGTTGAACAAACTTAGATATTTCAATTGCGAGGGCTTTGTTAATTGATGATATAAGTAATGACT CGTGCACTATAATCATAGAAAAATGCTACACTACACGAAAGGGTGTCTGTCGTGTAATGCACAATGTCATTTTGTGGCGG TTTCAAACCGCTTGTTATGTGAAAATCGCTAGAAATTTTCATTTTGGGTTTTTGCAATTTGTGACAGCTTATACATTTTT GGCGGTTTAGAACTGCCTGGAAACATGAATCATGCATAACACGACAAAAAGTTGGCGTGTCATATAACATTGCTTATAAT CATATTTTAGTGAATGATCAAATTAATTCTCCATGTTATCAAAAAATAATCTCCAAAATGTTGGGGTTTGGTTAGTACAT TTATAGAAAAAGAAAATACTTTTTGATTATCTAAAATGTTGGTCAAATTAGTCTCTATGGAGACTAACTTGATCGACATT TTATGTGACCTCAAGGACTAATCTAACCGACAATTTAAATTGCATGAGTTATTTTCTTCAAGAAACGATCTGGTTAGAGC CTAACACTTTCATGAACCAATTTGATCATTCACTCGATCATTTATCAAATACATCTAAGTGAATGAAATGCATCTGTACA CGCCTTTTAACTATTTAAAAATTCACTAAAAAAATTAGTTATGCCTCATAAGATATTTTGAAATACAACCTTTAAATATT TAAAAATATTTACTATAAGCAAGGGGTTGAATTGATTGTGTTCTTGTATTGTAGGTACCACTTGAAAGATGCAGTTCTTG AAGGGGGCATTCCATTTAACAAGGCATATGGAATGACAGCCTTTGAGTACCATGGGACAGATCCAAGGTTTAACAAGGTT TTCAACAAGGGAATGTCAGATCACTCTACCATCACAATGAAGAAAATTCTTGAGACCTACACAGGCTTTGAGGGTCTTAA ATCTCTGGTTGATGTAGGTGGTGGAACTGGAGCTGTAATCAACATGATTGTCTCAAAGTATCCGACTATAAAGGGCATCA ATTTTGATTTGCCCCATGTCATTGAAGATGCTCCATCTTATCCAGGTTGTGTTTTTAACTTCATATATTCACTGATTTAA TTGCTTGGTTTTGACATTTTGTTGAGATATTAATCATTTAGAATTGACATTGGTTTTTTCGTGTAGGAGTGGAGCATGTT GGTGGAGACATGTTTGTCAGTGTCCCAAAAGCTGATGCCGTTTTCATGAAGGTACACTTTTAAATCTGAAATCCCTTCAC TTTTTTTTTTCTTACCTACTTTAACCAGTATGGGCCTTTTTCTTTGTGCTTGTTTATTGATGGAAGTTAGATAAAGAAGT TGGTGGCCAAAAATGTTAGCAAAAAGTAAAAGAGTACCACTTAAGCCATATATAAGAAGTGATAAAAAAACCATATTTAA GCTTTTTTCATTTTTTTTGTCCTTAAAAACAAAGAAGCTATTTTCATTTTGGTCATGTGTTGATAGTTAATTTGTATCCT CCACAGCACTTATTCTCCACAAATCCCTCCTGCACAGCCATGGTCATTGAGTTTTACAATTAATGGTTAAGATCAATCTA AACTTTTTTTATTAAATTAAAAAATTTATGTTTATTTGTCCGTGTTGCAGAAGCTGCAGAAGGCTATAGAGGATGCTAAT TGGTTACAAACTTACTTCAATAATCTCATATGATAAAAAGCTACTATTTTTCTATTAAACTTTTTTCCCGCACTCTCTTT TTAGTTAAAATTCATATAGAACTTAAATTAGGAGCGAAACTCGATACTTTAATAGATACCTCAAGAATCTCAACCAATAA AAAAAGTGAGAATAACTATTCCAACAACAAAAAAGTGTCTAAAACTTTTATCTAAAAAAGTTGGTTTTATGGGAGGCTCA ATAGACCATAGTAATCACTTCCTGTTTTAGTCTAGGAACGTAGAATCAAGTTTTAGTCTTTACTTTTTCATATCTCTAAT AATGTTCACATGTTTATGCTAATGGTGTTAATTTCTTTATGTACATTCAGTGGATTTGTCATGATTGGAGTGATGAGCAC TGCTTGAAGTTTTTGAAGAACTGCTACGAGGCACTCCCAGACAACGGGAAAGTGATTGTGGCAGAATGCATTCTTCCAGT GGCTCCAGACTCTAGCTTAGCTACAAAAGGTGTGGTTCACATTGATGTCATCATGTTGGCTCACAATCCAGGAGGGAAAG AGAGAACAGAGAAAGAGTTTGAGGCTCTTGCTAAGGGTGCTGGATTCCAAGGATTCCAAGTCCTGTGTTGCGCTTTCAAC TCTTATGTCATGGAATTTCTCAAGAAGGTTTAGAGTCCATTTGGATACAGACTTATTGGAGTTTATATACTAGAAAATGC ATTAAATAAGCTCCAATAAGTGCTCTTTGGTTTGAATTGGTACTTAAGCTCTTTGTTGTGAATTCATATCGGTTGCATTT GGGTTCAGATTGTGGTTGAGGTGCTACTTATGAAAGGTTCCCCAGAAATATGTGATTTTCTCTTAAACAAAGTAGGAAAA AATAGTGAAAGAAGTTCTTTGTATACTGCCTATATGAAATAACAAGTTTCATGTTGTGGATTCTAGCTTTATGTTTTCTC TTTAATGCTGATTTTTTTTTTTTGTTAATTAGATTATTTACCAATACAAACGCATATGTAGCAATAAAATTCCAATGAGT ATGCTTTTAGTTTTCCTTGGTGGCAAATCCATCACCTTGTTGAATAGACAGAGAAGGGGTTTCAGTGTGATGGCAAGTTT AGAAGAAAGAAATAGGTCTAGCTCATTAAGATGGAAGAATAAACAGTTTATTGTGGATATGATGTTAGTAGACCTCCCAT CTTA
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0299800.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGGTTCAACCGGTGAAACCCAGATAACCCCAACCCATGTCTCCGACGAAGAAGCGAACCTCTTCGCCATGCAATTAGC CAGCGCCTCTGTTCTCCCCATGGTTCTGAAATCAGCCATTGAGCTTGATCTCTTGGAGTTCATAGCCAAGGCTGGCACCG GAGCTCAGCTTTCCCCAGCTGAAATAGCTTCTCAGCTTCCCACAACCAACCCTGACGCGCCCACCGTGCTCGACCGCATG CTCCGCCTCTTGGCCTGCTACAACATCCTCACTTGCTCTGTTCGAACTGAACAGGATGGGAAGGTGCAGAGGCTGTATGG TCTTGCCCCTGTTGCCAAGTACTTGGTTAAGAATGAAGATGGTGTTTCGATTTCTGCTCTTAATCTTATGAATCAGGACA AGGTTCTCATGGAAAGCTGGTACCACTTGAAAGATGCAGTTCTTGAAGGGGGCATTCCATTTAACAAGGCATATGGAATG ACAGCCTTTGAGTACCATGGGACAGATCCAAGGTTTAACAAGGTTTTCAACAAGGGAATGTCAGATCACTCTACCATCAC AATGAAGAAAATTCTTGAGACCTACACAGGCTTTGAGGGTCTTAAATCTCTGGTTGATGTAGGTGGTGGAACTGGAGCTG TAATCAACATGATTGTCTCAAAGTATCCGACTATAAAGGGCATCAATTTTGATTTGCCCCATGTCATTGAAGATGCTCCA TCTTATCCAGGAGTGGAGCATGTTGGTGGAGACATGTTTGTCAGTGTCCCAAAAGCTGATGCCGTTTTCATGAAGTGGAT TTGTCATGATTGGAGTGATGAGCACTGCTTGAAGTTTTTGAAGAACTGCTACGAGGCACTCCCAGACAACGGGAAAGTGA TTGTGGCAGAATGCATTCTTCCAGTGGCTCCAGACTCTAGCTTAGCTACAAAAGGTGTGGTTCACATTGATGTCATCATG TTGGCTCACAATCCAGGAGGGAAAGAGAGAACAGAGAAAGAGTTTGAGGCTCTTGCTAAGGGTGCTGGATTCCAAGGATT CCAAGTCCTGTGTTGCGCTTTCAACTCTTATGTCATGGAATTTCTCAAGAAGGTTTAG
Download CDS Sequence

Protein sequence (LotjaGi1g1v0299800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MGSTGETQITPTHVSDEEANLFAMQLASASVLPMVLKSAIELDLLEFIAKAGTGAQLSPAEIASQLPTTNPDAPTVLDRM LRLLACYNILTCSVRTEQDGKVQRLYGLAPVAKYLVKNEDGVSISALNLMNQDKVLMESWYHLKDAVLEGGIPFNKAYGM TAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYTGFEGLKSLVDVGGGTGAVINMIVSKYPTIKGINFDLPHVIEDAP SYPGVEHVGGDMFVSVPKADAVFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGVVHIDVIM LAHNPGGKERTEKEFEALAKGAGFQGFQVLCCAFNSYVMEFLKKV
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:1.10.10.10
1 115 115 3.3E-47
IPR036388
PIRSF
PIRSF005739
1 363 363 9.6E-150
IPR016461
SUPERFAMILY
SSF46785
15 119 105 1.63E-34
IPR036390
PANTHER
PTHR11746
16 361 346 7.4E-161 –
PANTHER
PTHR11746:SF215
16 361 346 7.4E-161 –
ProSiteProfiles
PS51683
24 363 340 76.823
IPR016461
Pfam
PF08100
34 85 52 1.5E-22
IPR012967
Gene3D
G3DSA:3.40.50.150
116 365 250 9.0E-92 –
SUPERFAMILY
SSF53335
121 360 240 8.02E-73
IPR029063
Pfam
PF00891
140 345 206 2.5E-84
IPR001077
CDD
cd02440
204 295 92 5.32426E-5 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0008171
Molecular function O-methyltransferase activity Catalysis of the transfer of a methyl group to the oxygen atom of an acceptor molecule.
Subterm of
GO:0046983
Molecular function Protein dimerization activity The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0299800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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