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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0301800 |
| Transcript ID | LotjaGi1g1v0301800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kazal-type serine protease inhibitor; TAIR: AT4G01575.1 serine protease inhibitor, Kazal-type family protein; Swiss-Prot: sp|O96790|DPGN_DIPMA Serine protease inhibitor dipetalogastin; TrEMBL-Plants: tr|V7ASR8|V7ASR8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0301800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:73562478..73563291) extracted from Lotus japonicus Gifu genome v1.2.
TCTGCATTATTCCAATTTCCAAGCAAACCCCTTTTTGGGACAAAGAATTTCCTTCCTCCCATTTTCTCTGCATTGTCTTC GCGAATTCTGCGGAATGCCGCGCTTTTCTGCGGTTTTCATCGCCGTCTTCGCCCTCTGCGTCTACCCGTCGGTCCTGCTA GCCGGAGACGAAGGGCGGGAGGTTTGCGCCGTGACAGCGCCGTCGTCATCGTGCCCTGTTACGTGTTTCCGGGCCGACCC GGTATGCGGCGTGGACGGCGTGACGTACTGGTGCGGGTGCGCAGAGGCGGCATGCGGCGGCGTGAAGGTTGCGAAATTGG GGTTCTGCGGAGTGGGGAATGGGGGTGCGGGGCCTGTCTCTGCTCAGGCACTTCTTCTGTTGCATATAGTGTGGCTCATT GTGTTAGCCTTCTTCGTCTGCTTTGGGCTTTTTTAATCCCTCACTCTTTGTCTGTTTAGGAGTATGTTACTGTTCAGGAA TAGTGGAAAACTGGAAATGGAATTACATGTTTTCTTTTCCATTTAAAAAATGGTGCTTGAATGAAGAAAAATATATTCAT CCATGTGCAACACCAACTGGTTGTGTTGGTGTTGCACATGGAGATAATAAGAGAAAGGAAGGTTTTTGTTTAAGGTAAAT ATATTGAAATGAAGTACAAAGGTGAATAAATTCTAGATGTCTTAGGGTCTGTTCGTATTTACGTTGGATTGAACGTGAAC GTAAACGAAACAATTTTTGTCTTTCACGTTTGAGCACTTTGGAAATCACGCACACACATTCCAAGAGAAGAAAACGGACT TTCAATTCCTATCC
CDS sequence (LotjaGi1g1v0301800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCGCGCTTTTCTGCGGTTTTCATCGCCGTCTTCGCCCTCTGCGTCTACCCGTCGGTCCTGCTAGCCGGAGACGAAGG GCGGGAGGTTTGCGCCGTGACAGCGCCGTCGTCATCGTGCCCTGTTACGTGTTTCCGGGCCGACCCGGTATGCGGCGTGG ACGGCGTGACGTACTGGTGCGGGTGCGCAGAGGCGGCATGCGGCGGCGTGAAGGTTGCGAAATTGGGGTTCTGCGGAGTG GGGAATGGGGGTGCGGGGCCTGTCTCTGCTCAGGCACTTCTTCTGTTGCATATAGTGTGGCTCATTGTGTTAGCCTTCTT CGTCTGCTTTGGGCTTTTTTAA
Protein sequence (LotjaGi1g1v0301800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPRFSAVFIAVFALCVYPSVLLAGDEGREVCAVTAPSSSCPVTCFRADPVCGVDGVTYWCGCAEAACGGVKVAKLGFCGV GNGGAGPVSAQALLLLHIVWLIVLAFFVCFGLF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 3 | 3 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 23 | 23 | - | – | |
| SignalP_EUK | 1 | 23 | 23 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 23 | 23 | - | – | |
| Phobius | 4 | 15 | 12 | - | – | |
| TMHMM | 7 | 24 | 18 | - | – | |
| Phobius | 16 | 23 | 8 | - | – | |
| Phobius | 24 | 91 | 68 | - | – | |
| PANTHER | 26 | 113 | 88 | 3.6E-42 | – | |
| Gene3D | 37 | 81 | 45 | 5.2E-5 | – | |
| TMHMM | 90 | 112 | 23 | - | – | |
| Phobius | 92 | 112 | 21 | - | – | |
| Phobius | 113 | 113 | 1 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0301800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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