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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0318300 |
| Transcript ID | LotjaGi1g1v0318300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | O-fucosyltransferase family protein; TAIR: AT5G64600.1 O-fucosyltransferase family protein; Swiss-Prot: sp|Q8W486|Y1491_ARATH Uncharacterized protein At1g04910; TrEMBL-Plants: tr|I1JY27|I1JY27_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0318300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:76652766..76658670) extracted from Lotus japonicus Gifu genome v1.2.
GAAACAAAATAGAATTAACAACAACAAAAAATACACATAGAGGAAATAGGTTCACTTTCACTATTTGCAAATCTGATTTG CCCCTGGTTTATGTGACCTGCATATAGAGGTTGTATTCAATGCTTGATTCAACACAAGTTTTGATTTCCAAGGTTTACAG CTTCATAACGTTGTTGTTGTTGTGTATGAGATGGTGAGCAGAGGCTCCCACAACCTCTACACTTCTAGATTCCACACTAG AAAACTGTCTCCTAGCATCATCACTTTCTACACCATTTTGATTTTCGGTTTCTCCATCTTCGTCTTCTTCTTCTACGTCA GGAACACTATCATCGATGAAGATCAACCGCACCCTCTGCTTTCTCAACAATCTCTATCTCACCAGGTGCGTACGCGCTGC TACTATTCCCTCGCTTGTTCTCTCCAGAACCGAATTCATTGAATCAGATCCGGAATGAATTGCTTGTTTCATCTTCGTTG ATCCTTCGGGTTTTGTTCACTGTTAGAAATTCCAAATCTGATGCTGGGTTTTGTGTAGTTCAACTTGCTTTGTGAAATTG TCCATAATAGACTGAGAATTTTGAGAATTCTAGCAACTGCAGCATTTAACAATTTTGATAATTGATGGCCATTTTTTGCT AGTTTTTTGTTTGAATACACAGTTTTCTGTGAATTTGAGTTGCTAAAAAAATGCATTGCAGGTGGAAAGTGGTATCAGCA AGTGTTTTGGTTCTAGCTTTATTAACTAGCATTTTGCTGCAGGTTCCAGAGCTACCTATGTATGATGAGAAACTTTGGGA TCCTCCTTTCAGTCATGGCTTACACCAGTGTGTCAAACCGACTGCTAGATATAAAGGTTTCATATACTTACATTTTCTAT TCATGTTGTAGCTCTTTTGTTGAGTTTTCTTCTTTCACCTGGTTCCACTCCTTTAGTTTAGGGTTTTCTAGTTTAGCGGC TTCGAGTCTATAATTGCTTGGTTTGTGAACTAGAGCATTGCCTCGCTATCATAGAGTAGTGCATTTTGTTTCCCTCCCTT CCTCTTAAATATGTTACATTTGTACTGCATCAGGTGCCCAAGGAGTTGATCGCTATCTGACTGTGAGAAGTAATGGTGGA CTAAATCAAATGCGAACTGGTGTATGTTACTTCTCTCCCTCTTGCAATGTTTTACAACTCTTGTATAAAAGCTGAGTTCA TGCTCTGATGCCTGGAATTGTATGCATAGTCAAGTATTTGCATTCAATAGCAGTTTTAAACTTCAGTATGTGATAATGCA TGTCAAATTGTTGTAGCTTGTAGAGTAGAGTAATCATTTTGAATTTCTTGTGTCCAATAGGTCTTTGACTTACTTCTTTT GGCATTAAACCTGGGAATATATGTTTGTTTACTTGTCTCTTTTTCCGTACTGTTGTCCTTCTTACAATTGTGAATAATTT GTCTTTTTTCCCCTTACTTCATGCAAGACTTCAGCAGTTCATCTACTAACTGCTGTTCTACTTAAGTTACTTTTGATGTA TTTTTTGGCTGTACTTAAGCAATCAATCTATCCTTTATCCTACAGATATCAGACATGGTGGCAGTGGCACATATAATGAA TGCAACTTTAGTCATTCCTCAATTGGATAAACGTTCATTCTGGCAAGACTCAAGGTATATCTGGGTATACTTTATTTTTG CATCATTTGGTTCTTTAGATGCATATTATTTCCTTTTCCAATATTATCTTCTTTTTTATTGGATGTGTGCGCAGTGTATT TTCAGATATATTTGATGAGCTTCATTTCATTGAGTCCCTGAAAGGAGATATCAAGATTGTGAGGGAACTTCCCAAGAACT TGGAAGGTGCCCCCCGGGCCAGGAAACATTTCACTTCCTGGGCTGGAGTTGGTTACTATGAAGAAGTGGCAAGGTTATGG AACGACTATCAGGTACTCAAGTTTTTCCTATACGATCTACAAGTTCTGGTGGTTCTCATTTTCTGCAGAAAGTTTCACTG TAAAACATGCTAATTGGTAAACTTAGTTTTGCTTGCTTAATCTCAAATCAGCTCTCAGTGAAAATTATTACTTCAATTTT CTGGCATATGATTCCGAATAGTTCTGTTTGTGAAATGTAGCAGTATGATTGAACACCAGAGACACTTTTATGCTCCAATC CATCCGTTTCTTCTTTAATATAGACAATGGAAAAACATTGCAGAAAAGGAAACGAGGAATAGGCTGGCAATTCAAAGTAA ACATTTCACATTTGTATGAATGTGGGAATTGCAGTTTTATTACAACAATTCATATAGTTGCAGCAAGGAGTTTGTATGCA ATCTAGTTGACAAATTTTTCCCATTAAAAAAATTTAGTAATATATATTGAAAAATGTTAGGCAGTGAATGTTTTGCTACA TATTTTACGGGGCAGTTTAATCATAAAAGGACATGGAATGCTACTGCTTTACTATCCTACCGCTGTCATTACCATATAGA AGAATAAGATATGGATGCATAGTTGTATGCCAGCATTGTTGTTCACTTACATTTTAAATCAATTGTCTTCTAATGTAGTA CAATGTTAAACATGTTTTGGTAGATGTCTGATTTAAGTTTTGAGGACCATATTAGATTTTTTGCTGACATTTATTGATTG CTTACTTCTGGGTATGTGCAAACTTAATATCCATTCTCAGTGGAAGGAATTTCTGTTTATGTTCTCGCTTAGCTAGTGAA TTTATCATTGCGCTTCTATGGTTCCTTATATTTCTGTTTTTTTTTTAATTTTGCTATTGACTGTATTTCATAGTCTGAAG GTCTGGAGCAATGATTTATTTTCCAGGTGATACATGTTGCAAAATCAGATTCTCGACTTGCAAACAATGATCTTCCTCTG GACATCCAGAGACTGAGATGCCGTGCAATGTATCAGGCACTCCGATTTTCTCCTCCTATTGAGGATCTAGGAAAGGTTTG ACTTTTTTCTGGTGTGTCATTTCTAGTGTCCTAAGTATCTCAAAAAGATATCATCTGTGCATCATATTTGGATTTGGTGA CTGATAAATAAAATGATGGAATGGAGATTAAAGAGGAATAACTGATTTGATTCCTGTGTGATCTTTTTTCTTAATAAGTT ATAATATGAACCAAATTGTAGCATTTTTTAATGGATCAATTTAGAGAGAATAAAAATGGGAAACATACCTGAAAAGATAC AAATTGAAATGAAATGTGATTTTCTCCTTCCCATTTTGTGCCTAAATAATTGGAAAACTAAGGATATTTGTAGTTTAAAA TTGTCTGTGGGAGTTTGGAATGTGAGGCTGACATATGTTTGTCTCATTGCCATCTCTTTAATGATTACTGTATAAGAAGT ACTATATTGAATTATTTAAATAGTTTGAATGCTGAAAAGTTAATTGGTTTAAAACCTTGTGAGTTCAAGTCCTATATTTC TGCATGTCATGCTAGAAAATGATGCATGTGATCCCAGGATTGCAATATGCTTCACTTTTGGTGCATTTAAGATGTCTATG TGGGGGCTTCCTGCTAAATTAGGTTCTGAGCATACATGACGGTGAAAAAACAGAGGTTGGTGGATCGGTTGAGATCACGC TGGGGAAGATACATCGCTCTCCATCTCAGATATGAGAAAGATATGCTGTCTTTTACTGGCTGTGCATATGGTCTGACGGA TGCAGAATCTGAAGAGCTGAGAGTTTTGAGGTGAAACTAGTTACTATGTATATGCTAGCTGCCTTGTGTTTGAAATATAT ATAACCTTAGAAATACATAATTATTCTGCTCATCTTTTTTCTAAGAAACATTTGTTTTAATTCTTCTAGGGAGAGTACAA ATTATTGGAAAGTGAAAAAGATAAATGCAACAGAACAGAGAATTGGAGGATTTTGTCCGTTGACTCCAAAGGAGGTGGGT GTTTTTCTTCTAGCTCTCGGGTTTCCTCCATCAACACCAATATACATTGCAGCGGGGGAGATCTATGGTGGTAACACTCA TCTTTCGGAGCTCTCCTCCCGTTTCCCTAATCTAGTCTTTAAGGTGTGGAGATCATTTTGCTGTCGAATTGTATTAAATA GTTCAATAGCGCCTCATCTGTGGTTGAGGTGCAGCATTGGCCTGATTAATTGATTGATAGATGATAACAGGAACACCTTG CAACTCCTGAAGAGCTGAAAGCTTTCACCAATCATGCATCTCAAAATGCTGCAGTTGATTACATAATCTCTATTGAGAGC GATGTATTTGTTCCGTCATATTCAGGAAATATGGCAAGGGCTGTTGAGGGACACCGCAGATTCTTAGGTCACCGCAAGAC AATTAACCCAGACAGGTACTGAATACATTTCAACCACTTCCAGGCTTCTCTTCTTGTTTTTCTTTCTTTTTCTTTTTAAT TTCCATGCTGGCCAAAATGTTGTTTTTTGTTCCTTAAATGTTCTGTATTTACGTTAGAAATTACTCAGCATTCAGAAACA ACAGCAATCAAAGTCTTATCCCACTAGTTGGGTTTTGTTACATGGACTAAATGAGGCCATCATATCCTATCATGAATATG TCTAATGAGTAATTACAGAGCAGTTAATTCCAAATGTTTCTTTATAGTTTGAATTATAGTTTTTCTTGGTTTTCCTTTAT TTCTAACTATTGTACCATCCTTCAATTGGTGTTTCTATGGTTTTTCTCCACACATGTTCAAAAGATAAAGAAAATGCCAT TTTATATTTGATTCTTCAATTTATTTCTTTTTAATTTTCTCATTCATTTTATTTTTAGGAAAGGACTTGTTGAAATTTTT GATAGGCTGGAAACTGGAGACCTAAAAGAAGGAGAGCCACTGTCACATCTGGTGCAGCAGATGCACAAGAACAGGTTTGT TTCTGGCATAATGTCACTAGATTCCCATTCTCTTTAGTTTCTGATGTGACCTTATTATGTAATGACTTGATAATTAGAAA AAAATTATTTACAACTACATTTTTCTTTAATATAGAACTTTATTATCTTGTTCATTTTAATCTGTACTTATTTCTTTCCA TTTAATCTGCAATCACTTGTTCTTTCACCTATCACCTCTAGTTGATTTCATTTTGCAAGTTTCTGAAATAAAAAGAACTT TGCTTATTTTTCATGATTATATTTATACGTGTAGGGAAGGAGCTCCAAGGAAAAGACAAGGCTCCCCACCAGGAATTAAA GGGCGAGCACGGTTTAGGACTGAAGAATCCTTTTACGAAGATCCATACCCTGAGTGTATATGTGGCTCTAGAAGCAAACT AGAAAGAACATGAAGAGAAACCACACTGCAGTTCCAGTTCTCATCACCCTTAATGGATAAATTTCATATGATCTTTATCA TATGAATTTTTTAAATCCAACTCTCCTCACTAGCATTAAACCAGTGGTTATTGATATTTTATGAAGAGGGAGATAGATCC AAAATTTTACAGGACGTGATCATGAAACAAGTTTACATGAGGCTATGAGAGGATTTATACCCGCCATTTGGTCACGGGCA CAGGCATATGAAGTTGGCAGCTTAGCTCCTTAGCTGAACTCTAACAATTCTCTTTGACACAATTTCTTGCATCATAAAAC TTAAGAAACATTTTAGTATTTTACTTTGTTTTTTTTTTTGGATTGTACATGATTATTATTTATATTACATTATATTTTAA TTCATGTATAGAGTACACTTTTTCCTGTTATGCATAATAAACAGTAGTCCCCAGGTGAGGTTAAAACAGAATACACTTTT TCCTGTTATGCATAAAGAGATTAATTAAAAAAACACTTCAGTATATTTCTTCAAATGGGGATTGTCTTGCTAGATGAGGA TCCTCTAACAGACTAACAGTACCAGGTTAAGGCTTTGCACATCACACGCTTTAGTTACAGCTCAC
CDS sequence (LotjaGi1g1v0318300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGAGCAGAGGCTCCCACAACCTCTACACTTCTAGATTCCACACTAGAAAACTGTCTCCTAGCATCATCACTTTCTA CACCATTTTGATTTTCGGTTTCTCCATCTTCGTCTTCTTCTTCTACGTCAGGAACACTATCATCGATGAAGATCAACCGC ACCCTCTGCTTTCTCAACAATCTCTATCTCACCAGGTTCCAGAGCTACCTATGTATGATGAGAAACTTTGGGATCCTCCT TTCAGTCATGGCTTACACCAGTGTGTCAAACCGACTGCTAGATATAAAGGTGCCCAAGGAGTTGATCGCTATCTGACTGT GAGAAGTAATGGTGGACTAAATCAAATGCGAACTGGTATATCAGACATGGTGGCAGTGGCACATATAATGAATGCAACTT TAGTCATTCCTCAATTGGATAAACGTTCATTCTGGCAAGACTCAAGTGTATTTTCAGATATATTTGATGAGCTTCATTTC ATTGAGTCCCTGAAAGGAGATATCAAGATTGTGAGGGAACTTCCCAAGAACTTGGAAGGTGCCCCCCGGGCCAGGAAACA TTTCACTTCCTGGGCTGGAGTTGGTTACTATGAAGAAGTGGCAAGGTTATGGAACGACTATCAGGTGATACATGTTGCAA AATCAGATTCTCGACTTGCAAACAATGATCTTCCTCTGGACATCCAGAGACTGAGATGCCGTGCAATGTATCAGGCACTC CGATTTTCTCCTCCTATTGAGGATCTAGGAAAGAGGTTGGTGGATCGGTTGAGATCACGCTGGGGAAGATACATCGCTCT CCATCTCAGATATGAGAAAGATATGCTGTCTTTTACTGGCTGTGCATATGGTCTGACGGATGCAGAATCTGAAGAGCTGA GAGTTTTGAGGGAGAGTACAAATTATTGGAAAGTGAAAAAGATAAATGCAACAGAACAGAGAATTGGAGGATTTTGTCCG TTGACTCCAAAGGAGGTGGGTGTTTTTCTTCTAGCTCTCGGGTTTCCTCCATCAACACCAATATACATTGCAGCGGGGGA GATCTATGGTGGTAACACTCATCTTTCGGAGCTCTCCTCCCGTTTCCCTAATCTAGTCTTTAAGGAACACCTTGCAACTC CTGAAGAGCTGAAAGCTTTCACCAATCATGCATCTCAAAATGCTGCAGTTGATTACATAATCTCTATTGAGAGCGATGTA TTTGTTCCGTCATATTCAGGAAATATGGCAAGGGCTGTTGAGGGACACCGCAGATTCTTAGGTCACCGCAAGACAATTAA CCCAGACAGGAAAGGACTTGTTGAAATTTTTGATAGGCTGGAAACTGGAGACCTAAAAGAAGGAGAGCCACTGTCACATC TGGTGCAGCAGATGCACAAGAACAGGGAAGGAGCTCCAAGGAAAAGACAAGGCTCCCCACCAGGAATTAAAGGGCGAGCA CGGTTTAGGACTGAAGAATCCTTTTACGAAGATCCATACCCTGAGTGTATATGTGGCTCTAGAAGCAAACTAGAAAGAAC ATGA
Protein sequence (LotjaGi1g1v0318300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVSRGSHNLYTSRFHTRKLSPSIITFYTILIFGFSIFVFFFYVRNTIIDEDQPHPLLSQQSLSHQVPELPMYDEKLWDPP FSHGLHQCVKPTARYKGAQGVDRYLTVRSNGGLNQMRTGISDMVAVAHIMNATLVIPQLDKRSFWQDSSVFSDIFDELHF IESLKGDIKIVRELPKNLEGAPRARKHFTSWAGVGYYEEVARLWNDYQVIHVAKSDSRLANNDLPLDIQRLRCRAMYQAL RFSPPIEDLGKRLVDRLRSRWGRYIALHLRYEKDMLSFTGCAYGLTDAESEELRVLRESTNYWKVKKINATEQRIGGFCP LTPKEVGVFLLALGFPPSTPIYIAAGEIYGGNTHLSELSSRFPNLVFKEHLATPEELKAFTNHASQNAAVDYIISIESDV FVPSYSGNMARAVEGHRRFLGHRKTINPDRKGLVEIFDRLETGDLKEGEPLSHLVQQMHKNREGAPRKRQGSPPGIKGRA RFRTEESFYEDPYPECICGSRSKLERT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 20 | 20 | - | – | |
| PIRSF | 2 | 502 | 501 | 1.8E-162 | ||
| PANTHER | 9 | 503 | 495 | 6.0E-279 | – | |
| PANTHER | 9 | 503 | 495 | 6.0E-279 | – | |
| Phobius | 21 | 43 | 23 | - | – | |
| TMHMM | 21 | 43 | 23 | - | – | |
| Phobius | 44 | 507 | 464 | - | – | |
| Pfam | 104 | 419 | 316 | 3.9E-69 | ||
| CDD | 104 | 425 | 322 | 3.33037E-158 | ||
| MobiDBLite | 459 | 486 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0318300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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