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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0319000 |
| Transcript ID | LotjaGi1g1v0319000.3 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Callose synthase; TAIR: AT2G13680.1 callose synthase 5; Swiss-Prot: sp|Q3B724|CALS5_ARATH Callose synthase 5; TrEMBL-Plants: tr|G7JBJ9|G7JBJ9_MEDTR Glucan synthase-like protein; Found in the gene: LotjaGi1g1v0319000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:76805823..76811278) extracted from Lotus japonicus Gifu genome v1.2.
AAGGATAGTGGAAGGCAACTTTTTGCTGGTACTGATGCAAAACCAGCTGTTCTCTTCCCTCCAGTGGTTACAGCACAATG GGAGGAACAGGTAATCAGTAATCTAATTTTAAATTATAATGTTTACTCTTTTATAGTTTGTATTATTATTAACTTTCCAT ATGCTTCTTTTCTTCCATAATAAAATTTAGTTTCCAACATGAAAGAAAAACTAAACAAATGCTTCAATAACTTATGATTT TTTGGGTGTTTCAGATTAGACGGCTTTATTTACTCTTGACGGTGAAGGAATCTGCCATTGAGGTTCCAACAAACCTTGAA GCACGCAGAAGAATTGCATTTTTTACCAACTCATTGTTCATGGATATGCCACGTGCTCCACGAGTTCGTAAAATGCTTTC ATTTAGGTATGGTGTTTCCTTAAATTGCATTGAACAGTGGTATCCTTGCTTGCACATCTTAATGTCTGATACATTAGACA TAAATTATCATTTTTTCTGGGCTGTTTAATATTTTATTTTTTAAAGCAATTTATGATGCATGTATGTTTAAATCTGATAT ATTCTGAAGTTATCGTGTGCTTATAAGTAGCATTTTGCTTATTGTTTGCAGTGTCTTAACTCCATACTACAGTGAAGAGA CTGTTTATTCGAAGAATGACCTCGAGGTTGAAAATGAAGATGGTGTGTCCATCATATATTACCTGCAGAAGATCTACCCT GGTTTGTAATAACTAACCCTATATAACTTGATTATATTTTTCTAGTAGAGAAAGGACTTGGCTAAGTTATAGTAAATATC AGATGAGTGGAATAACTTCATGGAGAGACTTGATTGTAAGAAAGATAGTGAAATATGGGAGAAAGACGAGAATGTATTGC AGCTACGTCACTGGGCTTCATTACGAGGACAAACGCTTTGCAGGACAGGTAATGTTGACTTCTCCCTCTCCATTCCTGCA AGCAGTTTTTGGTTGACTAATAATTTTTTTGTACTAATAAACCCATGCAGTTAGGGGAATGATGTACTACCGCCGAGCTC TAAAGCTCCAGGCTTTTCTTGATATGGCTAATGAACAAGGTAACAATAGTTCCTTTTCATTCTGTGCAATTTAGCTAAAT CTAGTATTTACTGTGGCAGTGGCAAGCATATATTTACAGCTTTTTCAAATCCTAGGCCTTTACCTTTACTGTAACAGTGA CTTGATGCAATCACGACACATTCATATTTGTCATATTGGTTGACAGAAAAGTAGTTATCATTCAAGAATAGATGACTTTA TGGTTTTTGCTATCTTGTGGGCAGAGATACTTGATGGCTATAAAGCTGTAACTGTTCCATCTGAGGAAGACAAAAAGAGT CATAGATCACTATATGCTAGTCTAGAGGCTGTCGCGGACATGAAATTCACATATGTCGCTACCTGTCAGAACTATGGGAA TCAGAAGCGTAGTGGAGATCGCCATGCAACAGACATCCTGAATTTGATGGTTAAGTATGTTCTCCAATTGATAAATTATA TCCGTTCATGTACAGTTTATATTTGGCTTTTAGTTTCTTGAACCCACGTGATTTAAGAATATAATTGCTGGTTCTTTGTT TGTAGCAATCCCTCGCTTCGGGTGGCATATATCGATGAAGTTGAAGAAAGAGAAGGAGGAAAAGTACAGAAAGTTTATTA CTCCGTACTGGTCAAAGCTGTGGACAATCATGACCAAGTAAATGCATATTCATTTTAGAAAATAAGTTAATTTACTCTTG AATACTTTGAACTTATGACTTTATTATTTTCTCTGAAGGAAATATATCGAATAAAACTGCCGGGTCCAGCAAAGTTAGGA GAAGGGAAGCCTGAAAATCAAAATCACGCAATCATTTTTACCAGAGGGGAAACCCTTCAGACTATTGACATGAACCAGGT AAAAACATTCTGTGATCTCTTTCATTTTTTTTTTTGAGAAAATTATGTACTTCTAAACTATACAAGGTGAAACTGGGTGT CGGTGCCTATTAAACTGGTATGTTGCAAATTTCATCTAGGATAATTACTTGGAAGAAGCTCTGAAAATGCGTAACCTTCT GGAAGAATTTAATGAGGATCATGGGGTGCGCCGACCTACTATATTAGGTGTTCGTGAGCATATTTTCACTGGCAGGTTTG ATGAATTAAATTCCACAAGAGTGAACAGTTTGTCATGTTAAGCTCCATATTACTGATTTCTATCAATTGCTACAGTGTTT CTTCCTTGGCTTGGTTTATGTCAAATCAAGAAACAAGCTTTGTCACAATTGGTCAAAGAGTTCTTGCAAGACCCCTGAAG TAAGTCAAGTGATTCTATGACATGGTTGACTTATAGTATTTGTTTAACTTCTAGGGTAAATCAGGAAACCTCCTGGTAAC AATTGGCTAATACAAGACCTCATCAACAGTCAAAGTAGTGATTTTATTTTAATGAGAATGCATGCAATTTCATAGGTTAA TGTATTATTCCAATGATACTTTGCTTACTGATGAAATTTATGCCTTCTCTGGCCCTCTTATTCATGTTAATTGCTGGATT GTCATACCCCATGGTATTCGAATTTTCGGAAACAAGTTGTGAACTATTGATTTTTCTTTTCTTTTCCATCTATGGTACCA CTGTTGCAAGAAATAAATCCTTAGAATGGATTTAATACAGAGTACATTTTCTGGCTTATGATGAATCTGTTGAATTCTAG GGTCCGATTCCACTATGGTCATCCAGATGTTTTTGATAGAATTTTCCACATTACCCGTGGAGGAATTAGCAAGGCTTCTC GTGGCATCAATCTGAGCGAGGATATTTTTGCCGGTAACATTCATGAAACATCTTTCTTAGATTTGATATTTATGTTTATT CCTTTACATCATATGCCTTTTCCTGTACAGGATTCAACTCAACACTACGTCGTGGGAATATTACCCATCATGAATACATC CAAGTTGGAAAGGGCAGAGATGTTGGGCTCAATCAAATCTCACTTTTTGAAGCAAAGGTGGCTTGCGGAAACGGAGAGCA GACGATAAGCAGAGATATCTACCGACTGGGGCATCGTTTTGACTTTTTTCGCATGCTATCATTTTATTTTACGACCATTG GATTTTATATCAGCTCAATGGTAATGGTTAATGCATTTAGGATTGCACTTTTTTTTTTGCTGCTCAAAACTGTTATTAAA ATTAAACTAACAGTTTAGTCTTAAAAAAATAATCCCAATGAGTAATGGATCTGAAAATAATCTCTTATTAATCGGTAACT AAGCTTGAGTATTGTTACACCTAGAGCTGACAAATCCTTTTATGGAGTTCTAAAATTTGTCTAGGCTACACACTTACATA TCTATTTGAATTTGGGCTTTTGTTTTTTTGATTTGTTAATTATGCATAGGGCAATAAATCTTTCTTTTGTTAATGTACAG ATTGTGGTCCTTACGTCTTATGCATTCCTATACGGCAGACTATACTTGTCATTGAGTGGTATTGAGGCTGCAATAGTGAA GTTAGCTAGGAGAAAGGGAGATGATAGTCTAAAGGCAGCAATGGCTTCACAATCCCTTGTCCAAATAGGACTTCTAACTA CTTTGCCCATGGTCATGGAAATTGGACTAGAAAGAGGGTTCAGAACTGCTCTAGGTGACCTCATAATAATGCAGTTGCAG CTAGCACCTGTATTTTTCACTTTCTCACTAGGTACAAAAGTGCACTATTTTGGGCGCACTCTTCTGCATGGAGGGGCAAA GTACAGAGCAACTGGGCGTGGTTTTGTAGTTCGCCATGAGAAGTTTGCCGAAAATTACAGGCTGTACTCTAGGAGTCACT TCGTAAAAGGGATTGAGCTCCTAATTTTGCTCATATGTTATAAGATCTATGGATCAGCAACACCTGAATCAACTGCATAT GCTCTACTTTCTTGGTCGATGTGGTTTTTGGTTTGTTCTTGGTTGTTTTCTCCATTCCTTTTTAACCCATCAGGGTTTGA GTGGCAGAAGATAGTTGAGGACTTTGATGATTGGACAAAATGGATAAGTAGTCGCGGTGGTATTGGTGTTCCTTCAAATA AGAGCTGGGAGTCCTGGTGGGATGAGGAACAAGAGCATCTACAGCACACTGGGTTTTTGGGGCGGATTTGTGAGATAATT CTTACCTTCCGTTTCTTTGTCTATCAGTACGGGATTGTGTATCATCTCCATGTAGCCAGAGGTGACAAGAGTATCATGGT AATTATGCTTTCTAATTTAATTTTATTCAATGCTATCATTCAAACTGTGGAACCTGCATGAAAGGGTTCAACTTCTTTTA ACACCTATGCTCTGTTCATACTATACTGCAATATAACATTCATGTTAACAGGGACTAGAAAAAGTAGTTCGTTGGATATA AAGTTCATTCCCATTCCAAATACCATGCTCTCATTTGCCACAACCCCAAACCAAGAAACAAATGACAGAAAATAAATTGA TAATATATAGAGGAGTTTTCTGACATGCATTTTCCCTTCAGGTTTATGCTTTGTCCTGGCTTGTGATAGTAGCTGTCATG GTTATCTTGAAGGTTGGTATTCAGTGATAAAAAAATTATTTCTGAATGAAAGCATCTATTCTGCTTGTGCAGATATGATT TTACTAACTGGTTCTGGTTGCATCTGAAACTGCAGATTGTGTCTTTGGGTAGAAAGCAGTTCAGCGCAGATTTCCAGTTG ATGTTTCGTCTTCTCAAGTTGTTTATGTTTATTGGAGCCATTGTTGCCATGGGCTTAATGTTTACTCTGCTAAGTCTCAC AATGGGAGATATCTTTGTGAGCCTCTTAGCTTTTTTGCCTACAGCATGGGCACTTATTCAGGTATTGTTTCAGAGTCATT CATTAACTCTTGTTTGGTGGACATTTGTATCATTTCATCGTGCCGAACAAACAAGTTTGTATGCTGGACATATTTGTCTC TGTAATTGTTTAGTAGTTGCCACTAAACCATCTTCAGGCTTAATCGTCATTTTTTGTTTATTCTGTGTTTACTAATCATA GGAAAATATGTTATGCTTCATAACATATTACAAGCCTTAATCATTTCTCTATACAAGATCTCAAAATCAAGTAGCTTAAA TATCTTTCTCTGTTCATGTAATTAATAAGTTTCCCTCATGATTCCTGATGCTACAGTGAATATAAAATCACTTGTTTCTT ACAACGGTGGTGTTTTGTTGTGCAGATAGCACAAGCATGCAGACCATTGGTGAAGGGTGTTGGAATGTGGGGTTCAGTGA AAGCTTTAGCAAGGGGCTATGAATACCTGATGGGAGTGGTTATTTTTACACCAGTGGCCATATTGGCATGGTTCCCATTT GTTTCAGAATTCCAAACGAGGCTGCTATTCAACCAAGCATTCAGCCGAGGGCTTCAAATCCAGCGCATTTTGTCTGGTGG CAAGAAGAATAAGTAA
CDS sequence (LotjaGi1g1v0319000.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATATGCCACGTGCTCCACGAGTTCGTAAAATGCTTTCATTTAGTGTCTTAACTCCATACTACAGTGAAGAGACTGT TTATTCGAAGAATGACCTCGAGGTTGAAAATGAAGATGGTGTGTCCATCATATATTACCTGCAGAAGATCTACCCTGATG AGTGGAATAACTTCATGGAGAGACTTGATTGTAAGAAAGATAGTGAAATATGGGAGAAAGACGAGAATGTATTGCAGCTA CGTCACTGGGCTTCATTACGAGGACAAACGCTTTGCAGGACAGTTAGGGGAATGATGTACTACCGCCGAGCTCTAAAGCT CCAGGCTTTTCTTGATATGGCTAATGAACAAGAGATACTTGATGGCTATAAAGCTGTAACTGTTCCATCTGAGGAAGACA AAAAGAGTCATAGATCACTATATGCTAGTCTAGAGGCTGTCGCGGACATGAAATTCACATATGTCGCTACCTGTCAGAAC TATGGGAATCAGAAGCGTAGTGGAGATCGCCATGCAACAGACATCCTGAATTTGATGGTTAACAATCCCTCGCTTCGGGT GGCATATATCGATGAAGTTGAAGAAAGAGAAGGAGGAAAAGTACAGAAAGTTTATTACTCCGTACTGGTCAAAGCTGTGG ACAATCATGACCAAGAAATATATCGAATAAAACTGCCGGGTCCAGCAAAGTTAGGAGAAGGGAAGCCTGAAAATCAAAAT CACGCAATCATTTTTACCAGAGGGGAAACCCTTCAGACTATTGACATGAACCAGGATAATTACTTGGAAGAAGCTCTGAA AATGCGTAACCTTCTGGAAGAATTTAATGAGGATCATGGGGTGCGCCGACCTACTATATTAGGTGTTCGTGAGCATATTT TCACTGGCAGTGTTTCTTCCTTGGCTTGGTTTATGTCAAATCAAGAAACAAGCTTTGTCACAATTGGTCAAAGAGTTCTT GCAAGACCCCTGAAGGTCCGATTCCACTATGGTCATCCAGATGTTTTTGATAGAATTTTCCACATTACCCGTGGAGGAAT TAGCAAGGCTTCTCGTGGCATCAATCTGAGCGAGGATATTTTTGCCGGATTCAACTCAACACTACGTCGTGGGAATATTA CCCATCATGAATACATCCAAGTTGGAAAGGGCAGAGATGTTGGGCTCAATCAAATCTCACTTTTTGAAGCAAAGGTGGCT TGCGGAAACGGAGAGCAGACGATAAGCAGAGATATCTACCGACTGGGGCATCGTTTTGACTTTTTTCGCATGCTATCATT TTATTTTACGACCATTGGATTTTATATCAGCTCAATGATTGTGGTCCTTACGTCTTATGCATTCCTATACGGCAGACTAT ACTTGTCATTGAGTGGTATTGAGGCTGCAATAGTGAAGTTAGCTAGGAGAAAGGGAGATGATAGTCTAAAGGCAGCAATG GCTTCACAATCCCTTGTCCAAATAGGACTTCTAACTACTTTGCCCATGGTCATGGAAATTGGACTAGAAAGAGGGTTCAG AACTGCTCTAGGTGACCTCATAATAATGCAGTTGCAGCTAGCACCTGTATTTTTCACTTTCTCACTAGGTACAAAAGTGC ACTATTTTGGGCGCACTCTTCTGCATGGAGGGGCAAAGTACAGAGCAACTGGGCGTGGTTTTGTAGTTCGCCATGAGAAG TTTGCCGAAAATTACAGGCTGTACTCTAGGAGTCACTTCGTAAAAGGGATTGAGCTCCTAATTTTGCTCATATGTTATAA GATCTATGGATCAGCAACACCTGAATCAACTGCATATGCTCTACTTTCTTGGTCGATGTGGTTTTTGGTTTGTTCTTGGT TGTTTTCTCCATTCCTTTTTAACCCATCAGGGTTTGAGTGGCAGAAGATAGTTGAGGACTTTGATGATTGGACAAAATGG ATAAGTAGTCGCGGTGGTATTGGTGTTCCTTCAAATAAGAGCTGGGAGTCCTGGTGGGATGAGGAACAAGAGCATCTACA GCACACTGGGTTTTTGGGGCGGATTTGTGAGATAATTCTTACCTTCCGTTTCTTTGTCTATCAGTACGGGATTGTGTATC ATCTCCATGTAGCCAGAGGTGACAAGAGTATCATGGTTTATGCTTTGTCCTGGCTTGTGATAGTAGCTGTCATGGTTATC TTGAAGATTGTGTCTTTGGGTAGAAAGCAGTTCAGCGCAGATTTCCAGTTGATGTTTCGTCTTCTCAAGTTGTTTATGTT TATTGGAGCCATTGTTGCCATGGGCTTAATGTTTACTCTGCTAAGTCTCACAATGGGAGATATCTTTGTGAGCCTCTTAG CTTTTTTGCCTACAGCATGGGCACTTATTCAGATAGCACAAGCATGCAGACCATTGGTGAAGGGTGTTGGAATGTGGGGT TCAGTGAAAGCTTTAGCAAGGGGCTATGAATACCTGATGGGAGTGGTTATTTTTACACCAGTGGCCATATTGGCATGGTT CCCATTTGTTTCAGAATTCCAAACGAGGCTGCTATTCAACCAAGCATTCAGCCGAGGGCTTCAAATCCAGCGCATTTTGT CTGGTGGCAAGAAGAATAAGTAA
Protein sequence (LotjaGi1g1v0319000.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDMPRAPRVRKMLSFSVLTPYYSEETVYSKNDLEVENEDGVSIIYYLQKIYPDEWNNFMERLDCKKDSEIWEKDENVLQL RHWASLRGQTLCRTVRGMMYYRRALKLQAFLDMANEQEILDGYKAVTVPSEEDKKSHRSLYASLEAVADMKFTYVATCQN YGNQKRSGDRHATDILNLMVNNPSLRVAYIDEVEEREGGKVQKVYYSVLVKAVDNHDQEIYRIKLPGPAKLGEGKPENQN HAIIFTRGETLQTIDMNQDNYLEEALKMRNLLEEFNEDHGVRRPTILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVL ARPLKVRFHYGHPDVFDRIFHITRGGISKASRGINLSEDIFAGFNSTLRRGNITHHEYIQVGKGRDVGLNQISLFEAKVA CGNGEQTISRDIYRLGHRFDFFRMLSFYFTTIGFYISSMIVVLTSYAFLYGRLYLSLSGIEAAIVKLARRKGDDSLKAAM ASQSLVQIGLLTTLPMVMEIGLERGFRTALGDLIIMQLQLAPVFFTFSLGTKVHYFGRTLLHGGAKYRATGRGFVVRHEK FAENYRLYSRSHFVKGIELLILLICYKIYGSATPESTAYALLSWSMWFLVCSWLFSPFLFNPSGFEWQKIVEDFDDWTKW ISSRGGIGVPSNKSWESWWDEEQEHLQHTGFLGRICEIILTFRFFVYQYGIVYHLHVARGDKSIMVYALSWLVIVAVMVI LKIVSLGRKQFSADFQLMFRLLKLFMFIGAIVAMGLMFTLLSLTMGDIFVSLLAFLPTAWALIQIAQACRPLVKGVGMWG SVKALARGYEYLMGVVIFTPVAILAWFPFVSEFQTRLLFNQAFSRGLQIQRILSGGKKNK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 1 | 68 | 68 | 1.1E-17 | ||
| PANTHER | 1 | 859 | 859 | 0.0 | – | |
| Phobius | 1 | 420 | 420 | - | – | |
| PANTHER | 1 | 859 | 859 | 0.0 | – | |
| Pfam | 73 | 675 | 603 | 2.3E-216 | ||
| CDD | 81 | 206 | 126 | 0.00782003 | – | |
| Coils | 258 | 278 | 21 | - | – | |
| Phobius | 421 | 443 | 23 | - | – | |
| TMHMM | 427 | 449 | 23 | - | – | |
| Phobius | 444 | 448 | 5 | - | – | |
| Phobius | 449 | 468 | 20 | - | – | |
| Phobius | 469 | 479 | 11 | - | – | |
| Phobius | 480 | 498 | 19 | - | – | |
| Phobius | 499 | 509 | 11 | - | – | |
| Phobius | 510 | 530 | 21 | - | – | |
| Phobius | 531 | 572 | 42 | - | – | |
| Phobius | 573 | 592 | 20 | - | – | |
| Phobius | 593 | 597 | 5 | - | – | |
| TMHMM | 598 | 620 | 23 | - | – | |
| Phobius | 598 | 620 | 23 | - | – | |
| Phobius | 621 | 670 | 50 | - | – | |
| Phobius | 671 | 692 | 22 | - | – | |
| Phobius | 693 | 703 | 11 | - | – | |
| Phobius | 704 | 724 | 21 | - | – | |
| TMHMM | 704 | 726 | 23 | - | – | |
| Phobius | 725 | 743 | 19 | - | – | |
| TMHMM | 739 | 761 | 23 | - | – | |
| Phobius | 744 | 762 | 19 | - | – | |
| Phobius | 763 | 767 | 5 | - | – | |
| TMHMM | 765 | 787 | 23 | - | – | |
| Phobius | 768 | 788 | 21 | - | – | |
| Phobius | 789 | 808 | 20 | - | – | |
| TMHMM | 808 | 830 | 23 | - | – | |
| Phobius | 809 | 829 | 21 | - | – | |
| Phobius | 830 | 860 | 31 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | 1,3-beta-D-glucan synthase complex | A protein complex that catalyzes the transfer of a glucose group from UDP-glucose to a (1->3)-beta-D-glucan chain. | ||
| Molecular function | 1,3-beta-D-glucan synthase activity | Catalysis of the reaction: UDP-glucose + [(1->3)-beta-D-glucosyl](n) = UDP + [(1->3)-beta-D-glucosyl](n+1). | ||
| Biological process | (1->3)-beta-D-glucan biosynthetic process | The chemical reactions and pathways resulting in the formation of (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D-glucosidic bonds. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi1g1v0319000.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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