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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR003440
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We have found 71 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 6.503s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0071679.1
n.a. PREDICTED: callose synthase 10-like [Glycine max] gi|356507329|ref|XP_003522420.1| chr0 26367977 26375517 +
2 domain predictions
4 GO terms
Lj0g3v0164169.1
n.a. PREDICTED: callose synthase 12-like isoform X1 [Cicer arietinum] gi|502144098|ref|XP_004505578.1| chr0 77658080 77665851 +
2 domain predictions
4 GO terms
Lj0g3v0179159.1
n.a. PREDICTED: callose synthase 10-like [Cicer arietinum] gi|502133618|ref|XP_004501831.1| chr0 86939919 86944562 -
2 domain predictions
4 GO terms
Lj0g3v0215179.1
n.a. PREDICTED: callose synthase 12-like, partial [Glycine max] gi|356515186|ref|XP_003526282.1| chr0 109004017 109004623 -
2 domain predictions
4 GO terms
Lj0g3v0295109.1
n.a. PREDICTED: callose synthase 10-like [Cicer arietinum] gi|502133618|ref|XP_004501831.1| chr0 153383399 153388787 -
2 domain predictions
4 GO terms
Lj0g3v0318989.1
n.a. PREDICTED: callose synthase 2-like isoform X3 [Cicer arietinum] gi|502087187|ref|XP_004488455.1| chr0 166562428 166564507 -
2 domain predictions
4 GO terms
Lj1g3v1316860.1
n.a. PREDICTED: callose synthase 5-like [Cicer arietinum] gi|502137024|ref|XP_004502937.1| chr1 15754085 15771030 -
2 domain predictions
4 GO terms
Lj1g3v1318200.1
n.a. PREDICTED: callose synthase 5-like [Cicer arietinum] gi|502139861|ref|XP_004503941.1| chr1 15952307 15965932 -
2 domain predictions
4 GO terms
Lj1g3v3329600.1
n.a. PREDICTED: callose synthase 3-like [Cicer arietinum] gi|502100311|ref|XP_004491686.1| chr1 37711203 37736356 +
2 domain predictions
4 GO terms
Lj1g3v3329600.2
n.a. PREDICTED: callose synthase 3-like [Cicer arietinum] gi|502100311|ref|XP_004491686.1| chr1 37717830 37736356 +
2 domain predictions
4 GO terms
Lj1g3v3329600.3
n.a. PREDICTED: callose synthase 3-like [Glycine max] gi|356567300|ref|XP_003551859.1| chr1 37719358 37736356 +
2 domain predictions
4 GO terms
Lj3g3v0928250.1
n.a. PREDICTED: callose synthase 2-like isoform X3 [Cicer arietinum] gi|502087187|ref|XP_004488455.1| chr3 10966654 10972174 -
2 domain predictions
4 GO terms
Lj3g3v1036620.1
n.a. Glucan synthase-like 4 [Theobroma cacao] gi|508721746|gb|EOY13643.1| chr3 13740736 13760855 +
2 domain predictions
4 GO terms
Lj3g3v1036620.2
n.a. glucan synthase-like 4 [Arabidopsis thaliana] gi|334185351|ref|NP_001189893.1| chr3 13750538 13761701 +
2 domain predictions
4 GO terms
Lj3g3v2809260.1
n.a. PREDICTED: callose synthase 12-like [Cicer arietinum] gi|502083160|ref|XP_004487377.1| chr3 34439897 34442572 +
2 domain predictions
4 GO terms
Lj3g3v2809270.1
n.a. PREDICTED: callose synthase 12-like, partial [Glycine max] gi|356515186|ref|XP_003526282.1| chr3 34442693 34444241 +
2 domain predictions
4 GO terms
Lj4g3v1345780.1
n.a. PREDICTED: pentatricopeptide repeat-containing protein At5g39350-like [Glycine max] gi|356495419|ref|XP_003516575.1| chr4 21120461 21122978 -
2 domain predictions
4 GO terms
Lj4g3v2742870.1
n.a. PREDICTED: callose synthase 5-like [Cicer arietinum] gi|502139861|ref|XP_004503941.1| chr4 36848299 36859081 +
2 domain predictions
4 GO terms
Lj4g3v2742870.2
n.a. PREDICTED: callose synthase 5-like [Cicer arietinum] gi|502139861|ref|XP_004503941.1| chr4 36848299 36859081 +
2 domain predictions
4 GO terms
Lj4g3v2742870.3
n.a. PREDICTED: callose synthase 5-like [Cicer arietinum] gi|502139861|ref|XP_004503941.1| chr4 36849356 36854977 +
2 domain predictions
4 GO terms
Lj5g3v2295690.4
n.a. Callose synthase [Medicago truncatula] gi|357445079|ref|XP_003592817.1| chr5 33649168 33659417 +
2 domain predictions
4 GO terms
Lj5g3v2295700.1
n.a. Glycosyl transferase, family 48 [Medicago truncatula] gi|124365537|gb|ABN09771.1| chr5 33654626 33661543 +
2 domain predictions
4 GO terms
Lj5g3v2296720.1
n.a. PREDICTED: callose synthase 9-like isoform 1 [Glycine max] gi|356536548|ref|XP_003536799.1| chr5 33663946 33690229 +
2 domain predictions
4 GO terms
Lj6g3v0920680.1
n.a. PREDICTED: callose synthase 7-like [Cicer arietinum] gi|502128499|ref|XP_004499983.1| chr6 9384823 9409230 +
2 domain predictions
4 GO terms
Lj6g3v2041890.1
n.a. PREDICTED: callose synthase 11-like isoform X1 [Cicer arietinum] gi|502077901|ref|XP_004485779.1| chr6 24010592 24017632 -
2 domain predictions
4 GO terms
LotjaGi1g1v0231700.2
n.a. Callose synthase-like protein; TAIR: AT2G36850.1 glucan synthase-like 8; Swiss-Prot: sp|Q9SJM0|CALSA_ARATH Callose synthase 10; TrEMBL-Plants: tr|A0A072V9X9|A0A072V9X9_MEDTR Callose synthase-like protein; Found in the gene: LotjaGi1g1v0231700 LjG1.1_chr1 54354031 54427366 -
2 domain predictions
4 GO terms
LotjaGi1g1v0231700.3
n.a. Callose synthase-like protein; TAIR: AT2G36850.1 glucan synthase-like 8; Swiss-Prot: sp|Q9SJM0|CALSA_ARATH Callose synthase 10; TrEMBL-Plants: tr|A0A0B2P9C4|A0A0B2P9C4_GLYSO Callose synthase 10; Found in the gene: LotjaGi1g1v0231700 LjG1.1_chr1 54354335 54419183 -
2 domain predictions
4 GO terms
LotjaGi1g1v0231700.4
n.a. Callose synthase-like protein; TAIR: AT2G36850.1 glucan synthase-like 8; Swiss-Prot: sp|Q9SJM0|CALSA_ARATH Callose synthase 10; TrEMBL-Plants: tr|A0A0B2P9C4|A0A0B2P9C4_GLYSO Callose synthase 10; Found in the gene: LotjaGi1g1v0231700 LjG1.1_chr1 54354335 54426979 -
2 domain predictions
4 GO terms
LotjaGi1g1v0231700.5
n.a. Callose synthase-like protein; TAIR: AT2G36850.1 glucan synthase-like 8; Swiss-Prot: sp|Q9SJM0|CALSA_ARATH Callose synthase 10; TrEMBL-Plants: tr|A0A0B2P9C4|A0A0B2P9C4_GLYSO Callose synthase 10; Found in the gene: LotjaGi1g1v0231700 LjG1.1_chr1 54354335 54426979 -
2 domain predictions
4 GO terms
LotjaGi1g1v0319000.1
n.a. Callose synthase; TAIR: AT2G13680.1 callose synthase 5; Swiss-Prot: sp|Q3B724|CALS5_ARATH Callose synthase 5; TrEMBL-Plants: tr|G7JBJ9|G7JBJ9_MEDTR Glucan synthase-like protein; Found in the gene: LotjaGi1g1v0319000 LjG1.1_chr1 76805485 76821846 -
2 domain predictions
4 GO terms
LotjaGi1g1v0319000.2
n.a. Callose synthase; TAIR: AT2G13680.1 callose synthase 5; Swiss-Prot: sp|Q3B724|CALS5_ARATH Callose synthase 5; TrEMBL-Plants: tr|G7JBJ9|G7JBJ9_MEDTR Glucan synthase-like protein; Found in the gene: LotjaGi1g1v0319000 LjG1.1_chr1 76805817 76821482 -
2 domain predictions
4 GO terms
LotjaGi1g1v0319000.3
n.a. Callose synthase; TAIR: AT2G13680.1 callose synthase 5; Swiss-Prot: sp|Q3B724|CALS5_ARATH Callose synthase 5; TrEMBL-Plants: tr|G7JBJ9|G7JBJ9_MEDTR Glucan synthase-like protein; Found in the gene: LotjaGi1g1v0319000 LjG1.1_chr1 76805823 76811278 -
2 domain predictions
4 GO terms
LotjaGi1g1v0319000.4
n.a. Callose synthase; TAIR: AT2G13680.1 callose synthase 5; Swiss-Prot: sp|Q3B724|CALS5_ARATH Callose synthase 5; TrEMBL-Plants: tr|G7JBJ9|G7JBJ9_MEDTR Glucan synthase-like protein; Found in the gene: LotjaGi1g1v0319000 LjG1.1_chr1 76805823 76812542 -
2 domain predictions
4 GO terms
LotjaGi1g1v0319000.5
n.a. Callose synthase; TAIR: AT2G13680.1 callose synthase 5; Swiss-Prot: sp|Q3B724|CALS5_ARATH Callose synthase 5; TrEMBL-Plants: tr|A0A151ST57|A0A151ST57_CAJCA Callose synthase 5; Found in the gene: LotjaGi1g1v0319000 LjG1.1_chr1 76805823 76821482 -
2 domain predictions
4 GO terms
LotjaGi1g1v0319000.6
n.a. Callose synthase; TAIR: AT2G13680.1 callose synthase 5; Swiss-Prot: sp|Q3B724|CALS5_ARATH Callose synthase 5; TrEMBL-Plants: tr|G7JBJ9|G7JBJ9_MEDTR Glucan synthase-like protein; Found in the gene: LotjaGi1g1v0319000 LjG1.1_chr1 76805823 76821482 -
2 domain predictions
4 GO terms
LotjaGi1g1v0554200.1
n.a. Callose synthase; TAIR: AT5G13000.1 glucan synthase-like 12; Swiss-Prot: sp|Q9LXT9|CALS3_ARATH Callose synthase 3; TrEMBL-Plants: tr|A0A0B2QTX7|A0A0B2QTX7_GLYSO Callose synthase 3; Found in the gene: LotjaGi1g1v0554200 LjG1.1_chr1 108615963 108642084 +
2 domain predictions
4 GO terms
LotjaGi1g1v0554200.2
n.a. Callose synthase; TAIR: AT5G13000.1 glucan synthase-like 12; Swiss-Prot: sp|Q9LXT9|CALS3_ARATH Callose synthase 3; TrEMBL-Plants: tr|I1KZH4|I1KZH4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0554200 LjG1.1_chr1 108616035 108642257 +
2 domain predictions
4 GO terms
LotjaGi1g1v0554200.3
n.a. Callose synthase; TAIR: AT5G13000.1 glucan synthase-like 12; Swiss-Prot: sp|Q9LXT9|CALS3_ARATH Callose synthase 3; TrEMBL-Plants: tr|A0A0B2QTX7|A0A0B2QTX7_GLYSO Callose synthase 3; Found in the gene: LotjaGi1g1v0554200 LjG1.1_chr1 108616289 108641390 +
2 domain predictions
4 GO terms
LotjaGi1g1v0554200.4
n.a. Callose synthase; TAIR: AT5G13000.1 glucan synthase-like 12; Swiss-Prot: sp|Q9LXT9|CALS3_ARATH Callose synthase 3; TrEMBL-Plants: tr|G7KWP5|G7KWP5_MEDTR Glucan synthase-like protein; Found in the gene: LotjaGi1g1v0554200 LjG1.1_chr1 108616289 108641390 +
2 domain predictions
4 GO terms
LotjaGi1g1v0554200.5
n.a. Callose synthase; TAIR: AT5G13000.1 glucan synthase-like 12; Swiss-Prot: sp|Q9LXT9|CALS3_ARATH Callose synthase 3; TrEMBL-Plants: tr|A0A0B2QTX7|A0A0B2QTX7_GLYSO Callose synthase 3; Found in the gene: LotjaGi1g1v0554200 LjG1.1_chr1 108616304 108641390 +
2 domain predictions
4 GO terms
LotjaGi1g1v0554200.6
n.a. Callose synthase; TAIR: AT5G13000.1 glucan synthase-like 12; Swiss-Prot: sp|Q9LXT9|CALS3_ARATH Callose synthase 3; TrEMBL-Plants: tr|A0A0B2QTX7|A0A0B2QTX7_GLYSO Callose synthase 3; Found in the gene: LotjaGi1g1v0554200 LjG1.1_chr1 108616304 108641390 +
2 domain predictions
4 GO terms
LotjaGi3g1v0126900.1
n.a. Callose synthase; TAIR: AT1G05570.1 callose synthase 1; Swiss-Prot: sp|Q9AUE0|CALS1_ARATH Callose synthase 1; TrEMBL-Plants: tr|A0A0R0ISM0|A0A0R0ISM0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0126900 LjG1.1_chr3 15588416 15625572 -
2 domain predictions
4 GO terms
LotjaGi3g1v0126900.2
n.a. Callose synthase; TAIR: AT5G13000.1 glucan synthase-like 12; Swiss-Prot: sp|Q9LXT9|CALS3_ARATH Callose synthase 3; TrEMBL-Plants: tr|A0A072VJ28|A0A072VJ28_MEDTR Glucan synthase-like protein; Found in the gene: LotjaGi3g1v0126900 LjG1.1_chr3 15588463 15611687 -
2 domain predictions
4 GO terms
LotjaGi3g1v0126900.3
n.a. Callose synthase; TAIR: AT2G31960.1 glucan synthase-like 3; Swiss-Prot: sp|Q9SL03|CALS2_ARATH Callose synthase 2; TrEMBL-Plants: tr|A0A0R0ISM0|A0A0R0ISM0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0126900 LjG1.1_chr3 15588691 15624820 -
2 domain predictions
4 GO terms
LotjaGi3g1v0126900.4
n.a. Callose synthase; TAIR: AT1G05570.1 callose synthase 1; Swiss-Prot: sp|Q9AUE0|CALS1_ARATH Callose synthase 1; TrEMBL-Plants: tr|A0A0R0ISM0|A0A0R0ISM0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0126900 LjG1.1_chr3 15588691 15624820 -
2 domain predictions
4 GO terms
LotjaGi3g1v0147300.1
n.a. Callose synthase-like protein; TAIR: AT3G14570.1 glucan synthase-like 4; Swiss-Prot: sp|Q9LUD7|CALS8_ARATH Putative callose synthase 8; TrEMBL-Plants: tr|A0A0S3SK62|A0A0S3SK62_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0147300 LjG1.1_chr3 19781456 19801717 +
2 domain predictions
4 GO terms
LotjaGi3g1v0147300.2
n.a. Callose synthase-like protein; TAIR: AT3G14570.1 glucan synthase-like 4; Swiss-Prot: sp|Q9LUD7|CALS8_ARATH Putative callose synthase 8; TrEMBL-Plants: tr|K7MDN8|K7MDN8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0147300 LjG1.1_chr3 19781911 19800850 +
2 domain predictions
4 GO terms
LotjaGi3g1v0147300.3
n.a. Glucan synthase-like protein; TAIR: AT3G14570.1 glucan synthase-like 4; Swiss-Prot: sp|Q9LUD7|CALS8_ARATH Putative callose synthase 8; TrEMBL-Plants: tr|A0A0S3SK62|A0A0S3SK62_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0147300 LjG1.1_chr3 19781911 19800850 +
2 domain predictions
4 GO terms
LotjaGi3g1v0147300.4
n.a. Callose synthase-like protein; TAIR: AT3G14570.2 glucan synthase-like 4; Swiss-Prot: sp|Q9LUD7|CALS8_ARATH Putative callose synthase 8; TrEMBL-Plants: tr|A0A0L9UJB5|A0A0L9UJB5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0147300 LjG1.1_chr3 19795976 19801135 +
2 domain predictions
4 GO terms
LotjaGi3g1v0453900.1
n.a. Callose synthase-like protein; TAIR: AT4G03550.1 glucan synthase-like 5; Swiss-Prot: sp|Q9ZT82|CALSC_ARATH Callose synthase 12; TrEMBL-Plants: tr|G7JSU8|G7JSU8_MEDTR Callose synthase-like protein; Found in the gene: LotjaGi3g1v0453900 LjG1.1_chr3 86730300 86744013 -
2 domain predictions
4 GO terms