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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0320700 |
| Transcript ID | LotjaGi1g1v0320700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pyruvate dehydrogenase E1 component alpha subunit; TAIR: AT5G09300.1 Thiamin diphosphate-binding fold (THDP-binding) superfamily protein; Swiss-Prot: sp|Q84JL2|ODBA2_ARATH 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial; TrEMBL-Plants: tr|G7JBL9|G7JBL9_MEDTR 2-oxoisovalerate dehydrogenase E1 component, alpha subunit; Found in the gene: LotjaGi1g1v0320700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:77102615..77111193) extracted from Lotus japonicus Gifu genome v1.2.
GACGACACCAACATGGACTTACGTGGCAGTAACATCCTACACTAGACCTTATCAATCCGCAACCTACAACACTGAAAAAC AAGAACCAAGACCAATTTTATATGTAAATTGCAAAATACTCTGTTTCTGTTTCTCCCACCCAATAATCACTTCACTTCAA TAATCAATTATCATCTCCTCTGTTATTTGTTTCTGAATTTGAAGTTGCCATGATGAGGAAATCCACCACCACCTTCCTCG CCCGTTTCAAATCAAAGATAAACTACTCTCCTTCTCTTCCTCCACGCTTCTTCAGTTCTCCGAATCAACCTGACCCAAAT CGCAATGCGTTGTTGACCCTTCTCCCTTCACGCCGTTTTGCCTCCACTACTGCGCAAAATCCCATGGTTGATGATTCCAA TCAGAATCAGGTACTTTCTATCTCACTATTTTTGACATTTCAGATTTACTCTTTTTGTCTACTTTCTTCAATTATTTTAT CATTTTCATCTACGATTGCTAGATTTCTTACTCTCCAATGACTTAATTTTTTGAATTTAATGGTAAGGCACCGTAAGCGT AAACATTTTTTAAACATGCATCTAATTATGAGTTGCCAAATCAGAAAATAAACTTTTAATTTAATTAAAATAAAAATGAA TAAAAATGCTTTTGAATACGTGGTACTCGGCTGAACATTTGGGTAAAACATTTACAGTGTATAACCATTAAACTCTAATT TTTTTTTTTCCATTTTTAGAGGAAAAAAGGGAAAAAAGCAATATAAAAAGTTTTTTTTTTAAACATAGCTATATAAAAAG TTAATACTTAATATTAATAATGCTAAGAATAAAAAATCTTGACCCTTTGTGTCTAAACTCTAAACTTAGAAAATCTGAAA TGAATAAATAAAAATCAACTTTTATTATTTAAAAAGAATTAAAGGAGTATGCACGTAAAATTTATTTACACAGACATCTA ATTAAATTCCGCTAAATCAGAAATATATTTTAATTTTAGTTAAAATTTTAAAAAATGTAACAGATTCTCCTACCTATCAT ACTGTGATTGGATGTCACTCATTTTAAAATCATTAAACTGTTGATCCATAATGTATACATGGATGGTGGGCTTGAATGAC GTCCTTCTTTCTCTATGAATAATTGCATACTGACTGCATATGGCAGGCCATAGATTTTCCTGGTGGAACGGTGAAATTCA CCCCTGAAATGAGGTTTATACCTGAATCAACTCTTGAGAGAACACCCTGCTACCGCGTCCTTGATGACAATGGGCAGCCA ATTTCGGGAACTAATTTTGCACAGGTTTTTACATACTTGACCAACCATTTCATTTTTCTTGCATGTACTTCAGGAAAATA CATTAAAGTGAACTATAAAAAATATTAGGTCAGCAAGGAAGTTGCTGTCAAGATGTATAATGACATGGTGACACTCCAAA CTATGGACACTATATTTTATGAAGCACAAAGGCAAGGTAGAATATCATTTTATGTAACAACCGTTGGAGAAGAGGCTATC AATATTGCATCAGCTGCAGCTCTTACCATGGATGATGTTATTTTCCCTCAGGTTACAACCACAAGACCCTAAGAAAATGA TGTGTGTACTTATAATCTTCATTTCACTTGAATGTTATGTGAGAGCAATTTATACAGAAATCTATGCAAGAATTCTCCTA GTATGAATTTTGTATTCTCGTCAGGGATTAGTCCTCATGATTTATCATAATTCGCTTGCTTCATCATGATCTTAAGTGTG ATCTAACAACAAGAAATGCGATTGCTTGCAGTACAGGGAACAAGGAGTTTTGTTATGGCGCGGTTTTACTCTGCAAGAAT TTGCAAACCAGTGTTTCTCCAATAAATATGATAATGGGAAAGGAAGGCAGATGCCAGCCCATTATGGGTCCAACAAGCAC AATTACATTACTGTGGCATCAACAGTTGCGTAAGTACTGAAAGCTTCCCCTTCTTTGCACCATGACTATGACATTTGCAA ATTACAAAATTTGACTTGATCTATAGCTCTCAAATTCCCCATGCTGTTGGAGCTGCATATTCCTTAAAGATGGACAAAAA GAATGCATGCGCTGTCACTTACTTTGGAGATGGTGGCTCAAGTGAGGTAGATTACTCAACTGCATTACAATAACAGACTC ATTACTCCCCTTACTGAAAAGGGATAAAAACAAAGTTTGTAACTAAAACTTTGTTTTTGAATTTTTTCTAAGGCATTAAG GCAATGCAGTATCTCTTTGGGCTAACACTTTTCAGCTCTCAATATCTTTCTGGTTATAAAGTGCTGCCTATGTAAAAAAA ATTCATTTACCTCATTGCAGTAAATGAGTACAATAGAGTGCGTTTTGTTTTCAACTCTTGTGAATGGAACAACTTTATTA GTCAGCCTCCTACCGCTTTTCTGACAGTGGGGCAAAAGATTAGTCTCACGGCTACCAGTTCTGGGGATATCTTGGTTAAA ACCAGAGTGCTTTTTGTTTTCATTGGCAATCATTGTCAAGGATCCTCAGCAAGTTAAGAGATTTGTTTTCACTTTTTCTT TTCTAATATAGTGCCTTGACAGGGAGATTTCCATGCTGGGTTAAATTTTGCAGCTGTTATGGAGGCCCCGGTTATTTTTT TATGCCGGAATAATGGATGGGCTATTAGCACCCCAACGTCAGATCAATTTCGAAGTAATTTTCCTTTCTCTCTATTTCAG CATCTTCATTTTGGTCAGGTCTCTAGCATTGTCTAAAGGCATATAGTGTTTTATGTTTAAACATAGGTGATGGTATTGTC GTGAAAGGACAAGCGTATGGAGTTCGTAGCATCCGCGTAGATGGCAATGATGCCTTGGCCATTTATAGCGCTGTTCAAGC TGCTCGTCAAATGGCAATTAGTGAAGAGAGACCAGTTCTAATAGAAGTAATGTGATATAACTTCTTGAAGCCAAACCTTA GTGCTGTGGTCTCATATTAAATCATGTTAATGGCAGAGCAATTTTGTCTGACTTTTGCTTTCACAGGCTCTTACTTATAG AGTTGGACACCACTCCACATCGGATGATTCAACCAAGTATCGTCCAGCCAGTGAGATTGAATGGTGGAGACAGGCACGCG ATCCTGTGGCTAAATTTAGAAAGTGGATAGAAAGGAATGGTTGGTGGAATGCTGTGGCTGAGTCAGAGCTTAGAAACAGT TTGAGACAGCAGGTAAAACATCCATCTCTATAAATCCTTTGGCTTGTACTACATGCCATACTACTGTATCAAGTAGTGCA GCATTCCCCATTAACAACTTTATTAATTTGTAACTAACTGTTCTCATAATAGCTAGGTATAGCTCTTAATTATCTTCTCA TGATACCCTTAATTTTTCTTAGGAAGATGCTAAATGTTATGATACGAAACACTAGAAGTGGAAGTTAAACTCACCACCCC TCCATGATTTCCGTCAAATAATACTAGTTTTGCCTCATCAGCATTTCTTGCATTTTCCCTTCGTAACATATAGTAGTTAT GCTTTCCTCATAAGTTCAACATGTATCATTTCTCTATAACACTATTGTTTATCGTTAACCTTAGGCAGATTATTTAACTT TCTTGGATTTAAATATTCGGCTGCTTAAAATTTTAATGCTATACTGATGTTGATAAGAAAATATGTTGAACGACCTAGCA AAACTGAAAACTAAAAGTAGTGTGTAAATTACTCCCACTTAAATAGACCTGTAATGTTACTGGAATAATGAGTTGTGTGG ACAATGTTATGACTTAGTTTTGGATTTAAATTTACCAAGAGTCTTGCAAATTTATGATCATTATCACAATCACGTTATTA TTATTTTTGAATTTAATTTAGGTGGATTCTTAAAATCATTATTCAATAGTTCTAACTCAGGAATTTCCTGCTACAGCTTC TGCATACAATTCAGGTAGCGGAGAGTGTAGAAAAACCTCCGCTTGGGGACATTTTTAGTGATGTTTATGATGTCCCTCCA TCCAATCTCCGTGAGCAGGAGCAATGGCTGAAGGAGACTGTAAAAAATCATCCAAAAGAGTACCCAGCAAATATTTCTGT GTAGTCTTAAAAGCTTCACCAATATAAAGATACGTTGTTTCTTTTAATAAAAAATTATCTTCAAACTTGGATTCTTCTTT GTGTTAGTGTATGAATATTGTATTAGTGTATGAAAATTGTATATGCAACTTCTGTCCTGACTCCTGATTTTGCACTTCGA TCGGGTACTTTAATGATATGTTAATCAGTAGCATAGAAAGGCAATTGACATTAGAGGTGATAAATTCTTTACCTGTGATA CAGAAACTACTTTCTGGCCGTTGAAGACTACGCTACCTAAGGAGACTAAGGCTATGTTTGGATACCCGATGCTCCAGTGC CAACCGATGTTATCACCCACTTCGAGGTAAAAGGTGAATGAAAACTCTTCTTGTAAATTGGGATGAAAGTATTTTCACTA GGGGTGCACACAGGCCTATTTGGATCGGGTTTTGGGCGAGGACATACGAACCAAGGAAGAGAGTGCCGAGAGAAGGAAGA AAAATTTCTTAGGGTTTGAAGAGAGTGGCAATTGGAAATGAGACACACACACGATGAAAAAATCTCACACAGATTAGGAA AGAGTCAGGCCCAAAAAAAGAGGAAAGAGTCAGGCCCAAAAAGAATAAAATGTGAGCATATTGTAGGGGGTTCCAGGTTT GTTTGGGTTCTAATTCTCCGAGCCCAAGATGTGAACAAATAAGGTCGGATTGAATGAAAAATTGCTCGAACTAACCTGTG AACCAGAACCACCCAATTTTTACGGATCGGGTTGGGTCAACCAGATTAATCGAGTCAACCACAACCCTAATGCCCCCTAA TTTTCACGCTAACTCAATTGGTATTCAACCACATACTAAAGTCTTTTTTTTTTTGAAAAAAAAAACATACTAAAGTCTTA GTAGAACACAACGAGTACATGGAAACGAATAAAAGGGTATCTATCTATTTAGGGATGGCAAAAATAACCGGACCCACGGG TAAATACCCGCTTGGGTAATTGGACCTGCAGGAAGATGAAGCAGGTATTTTTACTACCCATTTAGAAACGGGCGGCTCCG GGTACCCGTGGGTACCCATTTATGATTAAAAAAATTATTTCGGGTGACTATTATTCAGTAGCATAGATATTTTTATTCCA TTTGGTTCTACAAGAAAGACCTTTAAAAAAAAAGTCTACAAGAAAGAGCACTTTCTGCTACGTGAATAAACTCAACAAGT ATTATTCATGATTTTAAAACACGCATGAAAACTATCTCTAGTGGTATCTCAAAGTTCTGATATATTTTCTACTCATCACA ATCAACAACAATAACAAAAACATTTTCCCCCAAGATCTATGCTCCAGAAAATTGACACACAAACCTATGTTTCATGATTT TACTTTTTATACATCTGTTAGACTTTGAATAAAATAATTCCAATGAACAAATTTCCCAAAACAAAATACATGCATATTTA TGACTATTTTTGTGATATGTGAAAATTCTAGCATGAAGGATTTATTGTATATCTTAATGAATTTCTTAAAGTAAAGGAGC AGAAAATATTGTATGGAATAAATAAAAAAAAATAAAACAAAAAAAAGATATAGGGACCCGCGGGTACCCGGACCCATTTA AGACCCGTTAAACGGGTACCCGTTTATTCATAGACGGACCCGTTGCCATCCTACCATTTAAATTTTATAGGTTATGATTT AAATTAGTGTTGGTTTACAAATAGTTTGTAGACTACGTAGCCCGTGTGAGTCGATTGAAAAACCAACATAATGATTTCTT ATCCAAGTGACTACACGAGGAAGTGATTCAGTTCCTCAATACAGGTTTCTAAGACACTCTTAAAAGCTTTAAGTGATCAC TATTGAAAAAATGTGAACGAAATAAGGCTAACGAACTAAAAAAATGACTAAAATGGATGAATAAAAGACTCAAACAACTA GAAATAAACATCTGAAAGCAGAATAAATAAAGTGAAAGAATGGTAAATGGTTGAAAGATCGTAAACAAAGTAAAGTGTTG AAAGGTAAAATACTGAAGGTTAAAAGGAATGCAAGAAATTTGTAGATTTTGATTGTTTGTTGAGTTGTGTCTGTGCAAAT GACTCTTCCCCTTTTTGTAGGGGCCAAATTTGCCTAACTTACAGCAGTTGATAATCACCTGCTACTAACCGACATTCCCA ATCCTTATAAGGACTCATAGATGGTTGAAACCACCTTCCCTATTTTCACAGGGTTGAACCTGTTGGTGACTTCCGCACCT AAAGGTATTCTAGAAGCTTTAAGATATTTCTAGCTTCGTGTCCAAGCTTTTGTATCTTCCCTCAAATCTTGTCCTCATAA ATGATTTCTTTTGCCTTGCCATTTCACCTTGTCGTGTGAATGGCAAACTCTGAGCCTTCGAATGTTTCTCTAACAGTTAA TACTGCTCTAGCGGCTGACATGTCTTTTCGGCTGCATATTTTTATGTGTCAACAATTAGATAAACGATAAATATAACCTT ACTTTTTTTTGGTATTACTAAGGTATCCCCGCAGTCGACAGTTATGAGTCTAATTCTCTCAAAGCTCGGATACCACATTA AGTGGGAAGATCTCTCCCAATAAATCATTCTCCATCCTCATCATAAAAAATCGAACTCTCATTTAAATGCTTAAGGAGAA GTCTACCAACTGTGTTATGACTTTTTGGTACTTTTTGGTACATAGTCTTACTTATCTATTATAATATATAAATTACTTAT CTATTATAATATATAAATTCTGAAGCGCAAAATGTAGCGTTGTCACATATCATTTACTTCAGCTACATCACATATTTAGC TTAGTTGTCACCAGGGTCTCAGTTTGAGTTAGCACCCTTTGCTCTCAAGGAAAACCAAGGAACACAGTATGAATACATCT TTTATCTATTATAATATATAAATTCTGAAGCGCGAAATGTAGCGTTACCACGTGTTGTTTACTTCAGCTACATCACATAT TTAGTTTAATTGTCACCTCATAGAGACTAGAGATATTTCATCATCCACTATTCTAAATGTAATTTCCATTATAATTAAAT ACAATTAGAAAGTACATATAAATCTATTATAGTAATTTAATTTCTTATTAGCAATACAATAGTGCATTATCTAATTGATT ATGACTTTTGAAAATAATTAAAAAAGTATTATTATTTTATTATTTTTATATGTTTAATATTATATTTTCTAATCTCTCAA CCATCTTACATAGTAATTATATGCTCAGACATTGCGCATGTTTTATTTTAATAATATATTAAATTTGAAGTTGAGATGTG GAGCTGCCAAACTAAACAAATCTGCTCTTATTTCATGTCACATAAGCAATTTTAAACAGTTTGAGCATTCTTCCTTATTT ATTTTTCAACTTTCAAATGATCATTTTCAGTAACATTTTTAACTCCACCAACATCCAGTACATGAGCCTCAAATAAGAAA AAAGTTTGAAATATGACCAAATGAATATAGTTAACCTTTCATCTAACCTCTCTTTAAAATACACTAGAAATTATACCCGT GCGTTGCACGGGTTTATTTATAATTTTTTAAAAATTATATATGATTATTATTGTTTTAATAAATATATAAATATTAAAAT ATGTGTAATCATAAAATATAATTAATTAAATAATAACTAGTGCTTTTTACCCGCGCGTTGCACGGGGAATTTGTCTATTG TATTTGATACATCGATCAATATTTTAAACTATAATAATTTTAAGATACTAAGAATGTAAGAACAATCATAATAAAGATGC AGATATTTAAAGAGCATAAATTTAGACACTCAATTCTAGTGTTTTGTAAGCATACATTGAATTAACTAATATAAAAATTT TGAAAAACACAGGAGTTAATATTCCAAAATCTTTAAGTTTTGCATATGTGAGGTATAACTGAATTTTGTTTGCGAAGATG TATACTTGACATATAGGGTGTTGTTTTTGTGGTTTAGTCTCAAGTGTTTCTTCTTTGTCGGGGGAGTCTGAGATCCCTTC TTCATTCAGTGATAATTCTTTGATTTTACCGGAGGCGGAGGATTCTGATGGCGTGCTCACAAGAGCAAAAAGGGCTCTAA TCGTGAGTAAAAAAGTGGGTGTTGTGTTTCAGTGTTCATATGAGGTGGTTCTCCAAGGGTTAATTAAACATATTGCGTCT CATAAAGTTTCGTGAGGGATCGACATTTTAATGCAGGTGGCGTGATTTTTGTCCCTGGAGCTTTCTTTCAATTCTAAGGG GTTTTGATGCTTCATGCTTCTGTTTTTTTTTTTTGCTCCATTTGTTGGCCTCTCGGGTTGTGTTTTTGTGTTGTACAGTC CCGGAGATTTTTAGCTTTTGGCTCCTATGCTTTTTCCCCTGATTTGTGTTCTTGATGTTTTAGCGTTAGGGCTTTTTTTG GTTTGTTTTAGGTTTGGCTCGTCTCCATGGTTTTTATCTGTTTTCTTTTTTGTTTTATCAGTTGACTTACATGGGAGAGT CTTGTTCCCATGATCTTTT
CDS sequence (LotjaGi1g1v0320700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGAGGAAATCCACCACCACCTTCCTCGCCCGTTTCAAATCAAAGATAAACTACTCTCCTTCTCTTCCTCCACGCTT CTTCAGTTCTCCGAATCAACCTGACCCAAATCGCAATGCGTTGTTGACCCTTCTCCCTTCACGCCGTTTTGCCTCCACTA CTGCGCAAAATCCCATGGTTGATGATTCCAATCAGAATCAGGCCATAGATTTTCCTGGTGGAACGGTGAAATTCACCCCT GAAATGAGGTTTATACCTGAATCAACTCTTGAGAGAACACCCTGCTACCGCGTCCTTGATGACAATGGGCAGCCAATTTC GGGAACTAATTTTGCACAGGTCAGCAAGGAAGTTGCTGTCAAGATGTATAATGACATGGTGACACTCCAAACTATGGACA CTATATTTTATGAAGCACAAAGGCAAGGTAGAATATCATTTTATGTAACAACCGTTGGAGAAGAGGCTATCAATATTGCA TCAGCTGCAGCTCTTACCATGGATGATGTTATTTTCCCTCAGTACAGGGAACAAGGAGTTTTGTTATGGCGCGGTTTTAC TCTGCAAGAATTTGCAAACCAGTGTTTCTCCAATAAATATGATAATGGGAAAGGAAGGCAGATGCCAGCCCATTATGGGT CCAACAAGCACAATTACATTACTGTGGCATCAACAGTTGCCTCTCAAATTCCCCATGCTGTTGGAGCTGCATATTCCTTA AAGATGGACAAAAAGAATGCATGCGCTGTCACTTACTTTGGAGATGGTGGCTCAAGTGAGGGAGATTTCCATGCTGGGTT AAATTTTGCAGCTGTTATGGAGGCCCCGGTTATTTTTTTATGCCGGAATAATGGATGGGCTATTAGCACCCCAACGTCAG ATCAATTTCGAAGTGATGGTATTGTCGTGAAAGGACAAGCGTATGGAGTTCGTAGCATCCGCGTAGATGGCAATGATGCC TTGGCCATTTATAGCGCTGTTCAAGCTGCTCGTCAAATGGCAATTAGTGAAGAGAGACCAGTTCTAATAGAAGCTCTTAC TTATAGAGTTGGACACCACTCCACATCGGATGATTCAACCAAGTATCGTCCAGCCAGTGAGATTGAATGGTGGAGACAGG CACGCGATCCTGTGGCTAAATTTAGAAAGTGGATAGAAAGGAATGGTTGGTGGAATGCTGTGGCTGAGTCAGAGCTTAGA AACAGTTTGAGACAGCAGCTTCTGCATACAATTCAGGTAGCGGAGAGTGTAGAAAAACCTCCGCTTGGGGACATTTTTAG TGATGTTTATGATGTCCCTCCATCCAATCTCCGTGAGCAGGAGCAATGGCTGAAGGAGACTGTAAAAAATCATCCAAAAG AGTACCCAGCAAATATTTCTGTGTAG
Protein sequence (LotjaGi1g1v0320700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMRKSTTTFLARFKSKINYSPSLPPRFFSSPNQPDPNRNALLTLLPSRRFASTTAQNPMVDDSNQNQAIDFPGGTVKFTP EMRFIPESTLERTPCYRVLDDNGQPISGTNFAQVSKEVAVKMYNDMVTLQTMDTIFYEAQRQGRISFYVTTVGEEAINIA SAAALTMDDVIFPQYREQGVLLWRGFTLQEFANQCFSNKYDNGKGRQMPAHYGSNKHNYITVASTVASQIPHAVGAAYSL KMDKKNACAVTYFGDGGSSEGDFHAGLNFAAVMEAPVIFLCRNNGWAISTPTSDQFRSDGIVVKGQAYGVRSIRVDGNDA LAIYSAVQAARQMAISEERPVLIEALTYRVGHHSTSDDSTKYRPASEIEWWRQARDPVAKFRKWIERNGWWNAVAESELR NSLRQQLLHTIQVAESVEKPPLGDIFSDVYDVPPSNLREQEQWLKETVKNHPKEYPANISV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 41 | 461 | 421 | 6.0E-239 | – | |
| PANTHER | 41 | 461 | 421 | 6.0E-239 | – | |
| Gene3D | 63 | 460 | 398 | 2.8E-139 | – | |
| SUPERFAMILY | 91 | 456 | 366 | 2.14E-106 | ||
| CDD | 122 | 414 | 293 | 1.24654E-142 | – | |
| Pfam | 126 | 420 | 295 | 1.2E-92 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces a disulfide. |
Expression pattern of LotjaGi1g1v0320700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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