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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001017
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We have found 25 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.633s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0065549.1
n.a. PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like [Glycine max] gi|356568971|ref|XP_003552681.1| chr0 22812431 22815060 +
2 domain predictions
1 GO term
Lj0g3v0065559.1
n.a. PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like [Glycine max] gi|356568971|ref|XP_003552681.1| chr0 22812556 22815240 +
2 domain predictions
1 GO term
Lj1g3v0912020.1
n.a. PREDICTED: 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial-like [Glycine max] gi|356515957|ref|XP_003526663.1| chr1 11553603 11561303 +
2 domain predictions
1 GO term
Lj1g3v1340510.1
n.a. 2-oxoisovalerate dehydrogenase subunit alpha [Medicago truncatula] gi|357464693|ref|XP_003602628.1| chr1 16056736 16062322 -
2 domain predictions
1 GO term
Lj2g3v1365830.1
n.a. pyruvate dehydrogenase, partial [Citrus x paradisi] gi|68138987|gb|AAY86036.1| chr2 21421896 21430539 +
2 domain predictions
1 GO term
Lj3g3v2517580.1
n.a. PREDICTED: pyruvate dehydrogenase E1 component subunit alpha-like [Glycine max] gi|356559679|ref|XP_003548126.1| chr3 30818698 30822188 +
2 domain predictions
1 GO term
Lj5g3v2264090.1
n.a. PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like [Glycine max] gi|356575371|ref|XP_003555815.1| chr5 33085479 33090267 +
2 domain predictions
1 GO term
LotjaGi1g1v0271300.1
n.a. Pyruvate dehydrogenase E1 component alpha subunit; TAIR: AT5G09300.1 Thiamin diphosphate-binding fold (THDP-binding) superfamily protein; Swiss-Prot: sp|Q84JL2|ODBA2_ARATH 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial; TrEMBL-Plants: tr|I1KAH2|I1KAH2_SOYBN Branched-chain alpha keto-acid dehydrogenase E1 alpha subunit-like protein; Found in the gene: LotjaGi1g1v0271300 LjG1.1_chr1 66166939 66174675 +
2 domain predictions
1 GO term
LotjaGi1g1v0271300.2
n.a. Pyruvate dehydrogenase E1 component alpha subunit; TAIR: AT5G09300.1 Thiamin diphosphate-binding fold (THDP-binding) superfamily protein; Swiss-Prot: sp|Q84JL2|ODBA2_ARATH 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial; TrEMBL-Plants: tr|A0A072V066|A0A072V066_MEDTR 2-oxoisovalerate dehydrogenase subunit alpha; Found in the gene: LotjaGi1g1v0271300 LjG1.1_chr1 66169958 66174251 +
2 domain predictions
1 GO term
LotjaGi1g1v0271300.3
n.a. Pyruvate dehydrogenase E1 component subunit alpha; TAIR: AT5G09300.1 Thiamin diphosphate-binding fold (THDP-binding) superfamily protein; Swiss-Prot: sp|Q84JL2|ODBA2_ARATH 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial; TrEMBL-Plants: tr|A0A072V066|A0A072V066_MEDTR 2-oxoisovalerate dehydrogenase subunit alpha; Found in the gene: LotjaGi1g1v0271300 LjG1.1_chr1 66172760 66174251 +
2 domain predictions
1 GO term
LotjaGi1g1v0320700.1
n.a. Pyruvate dehydrogenase E1 component alpha subunit; TAIR: AT5G09300.1 Thiamin diphosphate-binding fold (THDP-binding) superfamily protein; Swiss-Prot: sp|Q84JL2|ODBA2_ARATH 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial; TrEMBL-Plants: tr|G7JBL9|G7JBL9_MEDTR 2-oxoisovalerate dehydrogenase E1 component, alpha subunit; Found in the gene: LotjaGi1g1v0320700 LjG1.1_chr1 77101773 77111201 -
2 domain predictions
1 GO term
LotjaGi1g1v0320700.2
n.a. Pyruvate dehydrogenase E1 component alpha subunit; TAIR: AT5G09300.1 Thiamin diphosphate-binding fold (THDP-binding) superfamily protein; Swiss-Prot: sp|Q84JL2|ODBA2_ARATH 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial; TrEMBL-Plants: tr|G7JBL9|G7JBL9_MEDTR 2-oxoisovalerate dehydrogenase E1 component, alpha subunit; Found in the gene: LotjaGi1g1v0320700 LjG1.1_chr1 77102615 77111193 -
2 domain predictions
1 GO term
LotjaGi1g1v0535400.1
n.a. 2-oxoglutarate dehydrogenase E1 component family protein; TAIR: AT3G55410.1 2-oxoglutarate dehydrogenase, E1 component; Swiss-Prot: sp|Q54JE4|ODO1_DICDI 2-oxoglutarate dehydrogenase, mitochondrial; TrEMBL-Plants: tr|A0A0L9UWY3|A0A0L9UWY3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0535400 LjG1.1_chr1 106391663 106399717 -
2 domain predictions
1 GO term
LotjaGi1g1v0535400.2
n.a. 2-oxoglutarate dehydrogenase E1 component family protein; TAIR: AT5G65750.1 2-oxoglutarate dehydrogenase, E1 component; Swiss-Prot: sp|Q54JE4|ODO1_DICDI 2-oxoglutarate dehydrogenase, mitochondrial; TrEMBL-Plants: tr|A0A0L9UWY3|A0A0L9UWY3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0535400 LjG1.1_chr1 106393614 106399288 -
2 domain predictions
1 GO term
LotjaGi1g1v0535400.3
n.a. 2-oxoglutarate dehydrogenase E1 component family protein; TAIR: AT5G65750.1 2-oxoglutarate dehydrogenase, E1 component; Swiss-Prot: sp|Q54JE4|ODO1_DICDI 2-oxoglutarate dehydrogenase, mitochondrial; TrEMBL-Plants: tr|A0A0L9UWY3|A0A0L9UWY3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0535400 LjG1.1_chr1 106393614 106399288 -
2 domain predictions
1 GO term
LotjaGi1g1v0535400.4
n.a. 2-oxoglutarate dehydrogenase E1 component family protein; TAIR: AT3G55410.1 2-oxoglutarate dehydrogenase, E1 component; Swiss-Prot: sp|Q54JE4|ODO1_DICDI 2-oxoglutarate dehydrogenase, mitochondrial; TrEMBL-Plants: tr|A0A0L9UWY3|A0A0L9UWY3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0535400 LjG1.1_chr1 106393614 106399288 -
2 domain predictions
1 GO term
LotjaGi2g1v0312700.1
n.a. Pyruvate dehydrogenase E1 component subunit alpha; TAIR: AT1G59900.1 pyruvate dehydrogenase complex E1 alpha subunit; Swiss-Prot: sp|P52902|ODPA_PEA Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial; TrEMBL-Plants: tr|V7CHA1|V7CHA1_PHAVU Pyruvate dehydrogenase E1 component subunit alpha; Found in the gene: LotjaGi2g1v0312700 LjG1.1_chr2 78759251 78768790 +
2 domain predictions
1 GO term
LotjaGi3g1v0403700.1
n.a. Pyruvate dehydrogenase E1 component subunit alpha; TAIR: AT1G01090.1 pyruvate dehydrogenase E1 alpha; Swiss-Prot: sp|O24457|ODPA3_ARATH Pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic; TrEMBL-Plants: tr|A0A0B2Q7E3|A0A0B2Q7E3_GLYSO Pyruvate dehydrogenase E1 component subunit alpha; Found in the gene: LotjaGi3g1v0403700 LjG1.1_chr3 80649754 80653771 +
2 domain predictions
1 GO term
LotjaGi3g1v0403700.2
n.a. Pyruvate dehydrogenase E1 component subunit alpha; TAIR: AT1G01090.1 pyruvate dehydrogenase E1 alpha; Swiss-Prot: sp|O24457|ODPA3_ARATH Pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic; TrEMBL-Plants: tr|A0A0B2Q7E3|A0A0B2Q7E3_GLYSO Pyruvate dehydrogenase E1 component subunit alpha; Found in the gene: LotjaGi3g1v0403700 LjG1.1_chr3 80650429 80653167 +
2 domain predictions
1 GO term
LotjaGi3g1v0403700.3
n.a. Pyruvate dehydrogenase E1 component subunit alpha; TAIR: AT1G01090.1 pyruvate dehydrogenase E1 alpha; Swiss-Prot: sp|O24457|ODPA3_ARATH Pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic; TrEMBL-Plants: tr|A0A0B2Q7E3|A0A0B2Q7E3_GLYSO Pyruvate dehydrogenase E1 component subunit alpha; Found in the gene: LotjaGi3g1v0403700 LjG1.1_chr3 80650429 80653167 +
2 domain predictions
1 GO term
LotjaGi3g1v0403700.4
n.a. Pyruvate dehydrogenase E1 component subunit alpha; TAIR: AT1G01090.1 pyruvate dehydrogenase E1 alpha; Swiss-Prot: sp|O24457|ODPA3_ARATH Pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic; TrEMBL-Plants: tr|A0A0B2Q7E3|A0A0B2Q7E3_GLYSO Pyruvate dehydrogenase E1 component subunit alpha; Found in the gene: LotjaGi3g1v0403700 LjG1.1_chr3 80650497 80653167 +
2 domain predictions
1 GO term
LotjaGi5g1v0356200.1
n.a. 2-oxoglutarate dehydrogenase E1 component family protein; TAIR: AT5G65750.1 2-oxoglutarate dehydrogenase, E1 component; Swiss-Prot: sp|Q54JE4|ODO1_DICDI 2-oxoglutarate dehydrogenase, mitochondrial; TrEMBL-Plants: tr|A0A072W2L0|A0A072W2L0_MEDTR E1 subunit-like 2-oxoglutarate dehydrogenase; Found in the gene: LotjaGi5g1v0356200 LjG1.1_chr5 67120857 67125892 +
2 domain predictions
1 GO term
LotjaGi5g1v0356200.3
n.a. 2-oxoglutarate dehydrogenase E1 component family protein; TAIR: AT5G65750.1 2-oxoglutarate dehydrogenase, E1 component; Swiss-Prot: sp|Q54JE4|ODO1_DICDI 2-oxoglutarate dehydrogenase, mitochondrial; TrEMBL-Plants: tr|A0A072W2L0|A0A072W2L0_MEDTR E1 subunit-like 2-oxoglutarate dehydrogenase; Found in the gene: LotjaGi5g1v0356200 LjG1.1_chr5 67120974 67125820 +
2 domain predictions
1 GO term
LotjaGi5g1v0356200.4
n.a. 2-oxoglutarate dehydrogenase E1 component family protein; TAIR: AT5G65750.1 2-oxoglutarate dehydrogenase, E1 component; Swiss-Prot: sp|Q54JE4|ODO1_DICDI 2-oxoglutarate dehydrogenase, mitochondrial; TrEMBL-Plants: tr|A0A072W2L0|A0A072W2L0_MEDTR E1 subunit-like 2-oxoglutarate dehydrogenase; Found in the gene: LotjaGi5g1v0356200 LjG1.1_chr5 67121460 67125625 +
2 domain predictions
1 GO term
LotjaGi5g1v0356200.5
n.a. 2-oxoglutarate dehydrogenase E1 component family protein; TAIR: AT5G65750.1 2-oxoglutarate dehydrogenase, E1 component; Swiss-Prot: sp|Q54JE4|ODO1_DICDI 2-oxoglutarate dehydrogenase, mitochondrial; TrEMBL-Plants: tr|A0A072W2L0|A0A072W2L0_MEDTR E1 subunit-like 2-oxoglutarate dehydrogenase; Found in the gene: LotjaGi5g1v0356200 LjG1.1_chr5 67121460 67125625 +
2 domain predictions
1 GO term