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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0337900 |
| Transcript ID | LotjaGi1g1v0337900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine protein phosphatase 7 long form isogeny; TAIR: AT1G48120.1 serine/threonine-protein phosphatase 7 long form-like protein; Swiss-Prot: sp|Q9LNG5|PPP7L_ARATH Serine/threonine-protein phosphatase 7 long form homolog; TrEMBL-Plants: tr|A0A1B5Z9A6|A0A1B5Z9A6_TRISU Uncharacterized protein; Found in the gene: LotjaGi1g1v0337900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:79818924..79820408) extracted from Lotus japonicus Gifu genome v1.2.
AGGAGCCGGAGTCGGAGTCGGGGTCTGAATCGGGGTCGGAGTCGGGGTCTGAGTCTGAGATTGAGGTGAGGATGTAGAGG TAGAGGATCCAAATATGCCGCCGCTCCAGAGAGATCCACCGTTTCCTGGTGGGCCGGTTGAGTTGTCACTTCTGCAGCAT TACCCGGATCACATAGCGCCGTGGACGTGGCATACCCTACTAGGCACCACTGACCCTCGTTATTCTGAGCGAGGTGATTT GAGGCTTGCCACTGCTGGTACGAAGCTCGGGCTGATGACGTGTGAGGGGGACAATTACAGGGAGGTCCGCTTGATTGTGG AGAGGAGCGGACTGTATCCACTGGTCAGGTGCAGCTATGTAGAGACGGATCCAGGGCTTATATCGGCCCTTGTGGAGAGG TGGCACGAGGAGACTAGTAGTTTCCACATGCCATTTGGGGAGATGACTGTCACCCTTGACGACGTCTCCGCTCTTCTTCA CATCCCGGTTGGTGGGAGATTCTACACTCCAGGAGTGGCCTCGAGATATGATGTGGCAGAGACCTGCGCTTTACTGTTAG GGGGGGATGCAGATTTGTACATGGCTGAGTTTGATGTGAAGAGGGGTCCGACTATGAGGTTCAGCTTCTTGCGAGACCTT TACCCGACAGCTGTTGCAGGTTTGTTTCATTCATTATCTGAACTTTTTCCAACTATTATTTATATTTACTTAATCATAAT TGGTATTACATTGTAATGTAGAGGGGCGGTACGAGCATGCAGCCAGGATGTACCCGATGCATCTTGTTGGCGCGACATTG TTCGCCGACAAGAGTGGGGGGCACTCATTCTCCGCCCGTTGGATTGGCATGCTACAGGATCTTGAGCGGGTGTCGGAGTT CGCGTGGGGCGCCATGGCCCTTGCCACGTTGTACGACCAGCTTGGACAGTCTTCTCGCAGCGGGGTCAAACAGATGGGCG GTTACACTTCCCTGTTGATGGCCTGGGTCTTTGAGCACTTTCCAGACAGGCTCGTTCGCCGGTATGCGAACCCGGCTTAC ACAGAGGACCAGCCCAGAGCTCGTAGGTGGACAGAGTCACGGTCGGGGCATGCTAGGCTTGACGAGAGGCGAGTACTACT TGATGAGTTGACGGCCGACGACGTCACTTGGACTCCATATGAGGCCCACAGGGAATGGCGACAGCGGGGTGAGAGGGCTT TGTTCTCAGGCTACATTCGGTGTCCCTATCCCCCTGCTGTGCGACCTCATCTTCCGGAGCGGGTCATGCGACAGTTTGGG TATATACAGACGATCCCGCGCCACCCTAGTGAGATGGATAGATCTCCCGCAGCTGAGGCTGTTGATGCGGCATTCGCAGA TTATGTGCAGTACTTGTTCCCTGAGGGCGACCCTGCTATAGAGGAGGGACAGGCTGTGGGCGGTTACATGGATTGGTACG CTAGAGTGTCTCATTGTTTCATCATATCGGATGAGAGGAGGATTG
CDS sequence (LotjaGi1g1v0337900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCGCCGCTCCAGAGAGATCCACCGTTTCCTGGTGGGCCGGTTGAGTTGTCACTTCTGCAGCATTACCCGGATCACAT AGCGCCGTGGACGTGGCATACCCTACTAGGCACCACTGACCCTCGTTATTCTGAGCGAGGTGATTTGAGGCTTGCCACTG CTGGTACGAAGCTCGGGCTGATGACGTGTGAGGGGGACAATTACAGGGAGGTCCGCTTGATTGTGGAGAGGAGCGGACTG TATCCACTGGTCAGGTGCAGCTATGTAGAGACGGATCCAGGGCTTATATCGGCCCTTGTGGAGAGGTGGCACGAGGAGAC TAGTAGTTTCCACATGCCATTTGGGGAGATGACTGTCACCCTTGACGACGTCTCCGCTCTTCTTCACATCCCGGTTGGTG GGAGATTCTACACTCCAGGAGTGGCCTCGAGATATGATGTGGCAGAGACCTGCGCTTTACTGTTAGGGGGGGATGCAGAT TTGTACATGGCTGAGTTTGATGTGAAGAGGGGTCCGACTATGAGGTTCAGCTTCTTGCGAGACCTTTACCCGACAGCTGT TGCAGGTTTGTTTCATTCATTATCTGAACTTTTTCCAACTATTATTTATATTTACTTAATCATAATTGGTATTACATTGT AA
Protein sequence (LotjaGi1g1v0337900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPPLQRDPPFPGGPVELSLLQHYPDHIAPWTWHTLLGTTDPRYSERGDLRLATAGTKLGLMTCEGDNYREVRLIVERSGL YPLVRCSYVETDPGLISALVERWHEETSSFHMPFGEMTVTLDDVSALLHIPVGGRFYTPGVASRYDVAETCALLLGGDAD LYMAEFDVKRGPTMRFSFLRDLYPTAVAGLFHSLSELFPTIIYIYLIIIGITL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 181 | 181 | - | – | |
| PANTHER | 74 | 156 | 83 | 2.2E-13 | – | |
| PANTHER | 74 | 156 | 83 | 2.2E-13 | – | |
| Pfam | 79 | 138 | 60 | 6.6E-17 | ||
| Phobius | 182 | 211 | 30 | - | – | |
| TMHMM | 187 | 209 | 23 | - | – | |
| Phobius | 212 | 213 | 2 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0337900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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