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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0341900 |
| Transcript ID | LotjaGi1g1v0341900.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glutathione S-transferase; TAIR: AT2G29420.1 glutathione S-transferase tau 7; Swiss-Prot: sp|Q9ZW24|GSTU7_ARATH Glutathione S-transferase U7; TrEMBL-Plants: tr|A0A151T9Z0|A0A151T9Z0_CAJCA Putative glutathione S-transferase; Found in the gene: LotjaGi1g1v0341900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:80423165..80424134) extracted from Lotus japonicus Gifu genome v1.2.
ATGTCAGGGGATTCAGTCACCTTAATAGGGTTCTGGGGTAGTCCATTTGTCTTCAGTGTCAAGTGGGCTCTTGAACTAAA AGGGGTGAAATACCAATATGTGGAAGAAGATCTCAGCAACAAAAGTGCCATGCTCCTACAGTGTAATCCTGTTTACAAGC AGGTACCAGTTCTGGTGCATGATGGTAAGCCCCTGGCAGAATCACAAGTGATTCTTGAGTATATTGATGAGACCTGGAAG CAAAATCCTCTTCTTCCACATGATCCCTATGAAAGAGCCAAGGCCAGATTCTGGTCCAAATTCACTCAAGAAAAGGTAAT GAAGTGTATTGGTATCATATGCACCACTTTTTTTTATCATCTATGTGATGTGAGAGGCGAGTCTCAGCACAATAGTAAGG TAGTTGTTGCTAAGTGATTTTGTCGTCACTAATTTAGGCCGTAAAATCAGTCTCTTACAAAAATGTAAGGTAAAATTATC TAAATTAGATCAACAAAGTGGGTCTGTCCCCTTTCTAGAACTCGCGCATAGCGGGAGCTTTATAACACCAAAGTTCCCTT TAGTATATTCTGTATTTAAAATCTAATACAAAAAACCAACTTCTTATTTTCAGTGTGAACCAGTACTTAAAGCAACCTTT CTCAAAGCAGGGGAGGAACAACAAAAGGCAGTACAAGAAGTTAGAGAGAATCTAAAGACCCTTGAAGGTGGACTTGAGGG AAAACGCTACTTTGGAGGTGAGGGAATAGGCTTTACTGATATTGCTATTGGGTGGCTTGGATATTGGGTTCGAATAGTGG AGGAGATTGTGGGTATAAGCCTAGTTGATACAGAATCGATGGCTAAGCTTAATGCTTGGTTCGATGATTTTCTTGAGCTT CCTATTATCAAAGAATCCATGCCAAATCGTGATAAACTGCTTCAGTACATCAAGACCTTCCACAATGCGTTGACGCCCCC ATCCACCTGA
CDS sequence (LotjaGi1g1v0341900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCAGGGGATTCAGTCACCTTAATAGGGTTCTGGGGTAGTCCATTTGTCTTCAGTGTCAAGTGGGCTCTTGAACTAAA AGGGGTGAAATACCAATATGTGGAAGAAGATCTCAGCAACAAAAGTGCCATGCTCCTACAGTGTAATCCTGTTTACAAGC AGGTACCAGTTCTGGTGCATGATGGTAAGCCCCTGGCAGAATCACAAGTGATTCTTGAGTATATTGATGAGACCTGGAAG CAAAATCCTCTTCTTCCACATGATCCCTATGAAAGAGCCAAGGCCAGATTCTGGTCCAAATTCACTCAAGAAAAGTACTT AAAGCAACCTTTCTCAAAGCAGGGGAGGAACAACAAAAGGCAGTACAAGAAGTTAGAGAGAATCTAA
Protein sequence (LotjaGi1g1v0341900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSGDSVTLIGFWGSPFVFSVKWALELKGVKYQYVEEDLSNKSAMLLQCNPVYKQVPVLVHDGKPLAESQVILEYIDETWK QNPLLPHDPYERAKARFWSKFTQEKYLKQPFSKQGRNNKRQYKKLERI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 84 | 84 | 2.6E-38 | ||
| Phobius | 1 | 5 | 5 | - | – | |
| SFLD | 3 | 121 | 119 | 0.0 | – | |
| SFLD | 3 | 121 | 119 | 0.0 | – | |
| ProSiteProfiles | 4 | 83 | 80 | 22.954 | ||
| SUPERFAMILY | 5 | 104 | 100 | 6.87E-28 | ||
| Pfam | 5 | 77 | 73 | 8.9E-20 | ||
| PANTHER | 6 | 124 | 119 | 2.1E-57 | – | |
| Phobius | 6 | 24 | 19 | - | – | |
| CDD | 6 | 79 | 74 | 2.3719E-41 | – | |
| PANTHER | 6 | 124 | 119 | 2.1E-57 | – | |
| Phobius | 25 | 128 | 104 | - | – | |
| Gene3D | 85 | 127 | 43 | 2.4E-8 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0341900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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