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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0348500 |
| Transcript ID | LotjaGi1g1v0348500.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 14-3-3 protein; TAIR: AT5G10450.4 G-box regulating factor 6; Swiss-Prot: sp|Q96451|1433B_SOYBN 14-3-3-like protein B; TrEMBL-Plants: tr|G7J567|G7J567_MEDTR General regulatory factor 2; Found in the gene: LotjaGi1g1v0348500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:81727510..81729752) extracted from Lotus japonicus Gifu genome v1.2.
GTCCCGGAAAACCTAAGCAGGGAACAGTATGTCTACCTCGCCAAGCTAGCGGAGCAGGCGGAGCGCTACGAGGAGATGGT GGAGTTCATGCAGAAGCTCGTGGTAGGGTCCACACCCGCGGCGGAGCTCAGCGTGGAGGAGCGCAACCTCCTCTCCGTCG CCTACAAGAACGTCATCGGCTCCCTCCGTGCGGCGTGGCGGATCGTCTCGTCGATTGAGCAGAAGGAGGAGAGTCGGAAG AACGACGACCATGTGGTTCTTGTGAAGGATTACAGATCCAAGGTGGAGGTTGAGCTTTCCAACATCTGTGCTAGCATCCT CAACCTTTTGGATTCCAATCTCATCCCTTCTGCTTCTTCCAGTGAATCCAAAGTTTTCTATTACAAGATGAAAGGGGATT ATCATAGGTACTTGGCTGAGTTTAGGGTTGGTGATCAGAGAAAAGCTTCTGCTGAAGATACTATGTTGTCTTACAAGGCT GCACAGGTTTGATTTTTTTTTTTTTTTTGATTTGTGTTTCATGTTTCTGTTTTGATGATTGATTTTTTTGTTTTTTTTTT TGTTTTGGGGTTTTTGTAGGACATTGCTGCTACTGATCTTCCACCTACTCATCCTATAAGATTGGGTTTGGCACTCAATT TCTCTGTGTTCTACTATGAAATTCTCAACCAGTCTGACAAAGCATGTGCCATGGCTAAACAGGTCAGGGTTTAATTTGAT TTGTGTTCTTTCTTTTGTGTTGTGTGTGTGTGTGTGTTGCTTTGTTCATGATCAGTTTAGTCCATCTGGGTATATTTGTT TTGGATTAACCTGCCACTGTTTATGTTCTATGAATTGAGTCATGAATGCTGTATTTGATTACTTGATTTTCTGATTTATG AAATCACACCTTCTTGCTTCCTCATGATCAGTTGGGGCTTACTAGTATTTGATGGGAGTAGAATTTGACATTTTGACTAA TAATTGTTCTGTTTGACTTGGGTATGTGTCTGTGTGTATCTTATGAGAAGATGGGTGAAAAGGGGATTTTTTTGTGAATT TCTCTTGTTTGGCTTGCGGTAGCAATCTGTTTTATCTAAATTTGGTGAAGTTGTTGAGGATTTACATTTACACATGTGTT ATTCTATGCTGACTGCATACTAGGAAAGGGTTGGTCACAATCACATAGATCATAGTTCTTTCCTATATGTGAACATCATA GTTGAGCTGGATGAATAATGAATTGCATATCAGTTTAACTGCCACCTTTGGCTGCTTGTAGTTTTCACGGGTGAGGGTGA AGTTATTGTTGGGGAACTTTCAGTTTCTACTAAAACTTTGTGTGTTTTGGTGAGAGTTCTCTGACACTGAATGTATCTAT TCTGGTATTGAGTTTTGCTCATGGAGGTAGATAAGATTTTGACTTGAATTGACTAAAAGAGAAAAGTGGAAATTACATGA AGAAGCAAGTTAACAGAATTACTATCACTTTCATTAATAATTTTTTTAATCAACTGCGATGATTTTATAGTTACCTTATT TCTAACTCTGGTTAGCAAACTGCAAATTTTCTTGTTAGATTGCAACTATTTGTCTTGTTCTCCAAAAAAAATATGAAGAG GATGTTTTGATGATTTTTTTATTATTCACCTCAACAAATTTATTGTTCTTTTTTATAATTGTAAACTGTTAATTGGTTGT ACCAAACTGGAAGTGTTGTTAACTTAAACCTAATTCGATTTTCTTCCCCCAAAGAAAAGGTACACTTCAATTGGTCCATT AGCAATCCATGCTTATCCATATTGACACACATGGTTCCCTGTTTTTCAAGTATTCCATTTCACTTTCTGTTTTATGCTTA GCTTCTAGTGTATGTCTGTTCTGAGTGCTACAGCTGGAACACAGCCTTATTGATTCTAAAATCTATTAATAACATGTTTG GATCAGTTTCTCTTTAATCAAAATCAATTCTATCATTCAGAAGCTACTCACATAAACTCCTCCCCATAATTGATTTTGGC TTTAGAATCAATTGTGAAGAGATTCTCAAACATCCACTGAACCATATTGATTTCATTTTTGAAAGGCATTTGAGGAAGCA ATTGCTGAGCTGGACACCTTGGGAGAAGAATCCTACAAAGACAGCACCCTCATCATGCAGCTTTTAAGAGACAACCTGAC CCTTTGGACTTCTGATGTCCAGGTAAATGTCACTGTCTAACTTGAAGCATTTTGATGAATCACTCTTCCTAATGTTGCAA TGA
CDS sequence (LotjaGi1g1v0348500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGGAGTTCATGCAGAAGCTCGTGGTAGGGTCCACACCCGCGGCGGAGCTCAGCGTGGAGGAGCGCAACCTCCTCTC CGTCGCCTACAAGAACGTCATCGGCTCCCTCCGTGCGGCGTGGCGGATCGTCTCGTCGATTGAGCAGAAGGAGGAGAGTC GGAAGAACGACGACCATGTGGTTCTTGTGAAGGATTACAGATCCAAGGTGGAGGTTGAGCTTTCCAACATCTGTGCTAGC ATCCTCAACCTTTTGGATTCCAATCTCATCCCTTCTGCTTCTTCCAGTGAATCCAAAGTTTTCTATTACAAGATGAAAGG GGATTATCATAGGTACTTGGCTGAGTTTAGGGTTGGTGATCAGAGAAAAGCTTCTGCTGAAGATACTATGTTGTCTTACA AGGCTGCACAGGACATTGCTGCTACTGATCTTCCACCTACTCATCCTATAAGATTGGGTTTGGCACTCAATTTCTCTGTG TTCTACTATGAAATTCTCAACCAGTCTGACAAAGCATGTGCCATGGCTAAACAGGCATTTGAGGAAGCAATTGCTGAGCT GGACACCTTGGGAGAAGAATCCTACAAAGACAGCACCCTCATCATGCAGCTTTTAAGAGACAACCTGACCCTTTGGACTT CTGATGTCCAGGTAAATGTCACTGTCTAA
Protein sequence (LotjaGi1g1v0348500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVEFMQKLVVGSTPAAELSVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNDDHVVLVKDYRSKVEVELSNICAS ILNLLDSNLIPSASSSESKVFYYKMKGDYHRYLAEFRVGDQRKASAEDTMLSYKAAQDIAATDLPPTHPIRLGLALNFSV FYYEILNQSDKACAMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDVQVNVTV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 219 | 219 | 5.7E-136 | – | |
| Gene3D | 1 | 215 | 215 | 2.7E-109 | ||
| Pfam | 1 | 213 | 213 | 1.7E-92 | ||
| SMART | 1 | 221 | 221 | 2.3E-147 | ||
| PANTHER | 1 | 219 | 219 | 5.7E-136 | ||
| PIRSF | 1 | 221 | 221 | 2.1E-100 | ||
| SUPERFAMILY | 1 | 215 | 215 | 3.92E-92 | ||
| PRINTS | 17 | 46 | 30 | 2.0E-85 | ||
| ProSitePatterns | 23 | 33 | 11 | - | ||
| PRINTS | 66 | 90 | 25 | 2.0E-85 | ||
| PRINTS | 97 | 119 | 23 | 2.0E-85 | ||
| PRINTS | 132 | 158 | 27 | 2.0E-85 | ||
| PRINTS | 159 | 185 | 27 | 2.0E-85 | ||
| PRINTS | 186 | 215 | 30 | 2.0E-85 | ||
| ProSitePatterns | 195 | 214 | 20 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0348500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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