Transcript — View — Lotus Base

Overview

Field	Value
Gene ID	LotjaGi1g1v0351500
Transcript ID	LotjaGi1g1v0351500.1
Lotus japonicus genome version	Gifu v1.2
Description	Gamma-tubulin complex component; TAIR: AT1G80260.1 Spc97 / Spc98 family of spindle pole body (SBP) component; Swiss-Prot: sp\|Q8BKN5\|GCP5_MOUSE Gamma-tubulin complex component 5; TrEMBL-Plants: tr\|I1K7W7\|I1K7W7_SOYBN Gamma-tubulin complex component; Found in the gene: LotjaGi1g1v0351500
Working Lj name	n.a.

Genomic sequence (LjG1.1_chr1:82277177..82286403) extracted from Lotus japonicus Gifu genome v1.2.

ATTTTTTTTTTTGAAGTTTTTCTGGTGTATCCGGCTATCCGCCATTAACATCTCTCTTCGTTCACTCACCGAGAACCATC TTTCTCCACTCACCAGTGACCAGCATAAACCCCATGAGCGTTGGCTTCAGCAAATTCCGCACTAGTTCAAGATGGGCGCA GAGGCACAAATTCACCGAAGCTTAATCAACAAAATCTACGCTCCACTCTCCATCGAGTTCCCTTTCGCATCGCCAATCCC TTCTTTACGAACAAATGAACTCGAACTCGTACGCTTCTCACTCACTCACTCACTCACTCACTCACTCTCTTTCCCAATTT CTCCAGATTTCATTCTTCATTCCACTTTTTCACATTTCCCTTTGTCAATTTCATGAAAGGTTCGAGGCGTTTTGCGAATG CTGCAAGGGTTTTCTGGTTCCCTTTTCTGTTGGGATCACACTGCACATGCTTTTCATGCCAAGAGCGGAATCTTCGTTAC GCATCTCTCCCTCAAGAGCCTCAATTCCCTTCTCAGTCAATTCATCCACGCTGCTTCGTGTCTCCAATTGGTTCAGATTA CGCTCAGTAAGGTTGAATCTGCTCCGCCCAAAGCTCCTCCCACTTTGATGGCGTTTTCCTCCTCCGCTTCCGCATGGCTT AAGGTTTGTTCGCGACGCCCTATGGGATCCAATTTTAGGCATGTTCATGTTGTGCTAAAAGGAAGTTATTCATTGTTAAT TGAGTTAAAGTTGTTGTCGCGCAGCGGTTACGGGATATTGCATTGAAGGAGGAAATGAACATGAACATGAACAATGCAGA TGGTCTAATCACTCCCACGTTGTTAGGATTGGCGAATTCTTTATCAAGGTTTATACTTTTTAGCAGAATTATGATTATTT TTGTATGTATGTTGGTGGGTTTTTATCTTTTGTTTCTCAAGAGTTTGATTTTAGGAAAGTTTGTTTACATTTGGATTAGT TTCCCCGGATTGTTCTTTTGAGTCATTGCGCTCCTGATTCAGTTTATTTCAGCGACTGAGTTTGTGACAGGATCTGAATC TGATGATCATATGTTGACTTTAGTCTTTGCTCAGGTGCTGAGTTCCTGTTGCGAATAGTCAGTGAGGCCATTCCCGCGCT GTATTTTGAGTTTGGGGTGTCTGTGCCGGCAGCAGAACTGGCTGTTCACGTGCTTGACTATCTTCATAAGAAGCTTGATG AAATGTGTCTTGTGCAAGGTGGTGAGGTCATGACTCTTTCCTGCAGCACATTGTGTATTTTAAAAAAAATATTCTTGGTT CATGCTGCTGAACTTTAGAAACTGTATTAATTACAGGAGGAAGCTTATCAGATGGTGCTTTATATGTACATGGGAAGCTT ATTGCCATATATTGAGGGTCTGGATTCCTGGCTTTTTGAAGGAATACTTGATGATCCTTCTGATGAGGTAATGGTTATTT AATCTCTGGATTCCTGAAGGGGAGGAAGTTCTGTACTTCTTTATCCATGTTGTGTTGATGAATGTCACAGAATTAGTGCT GTACTGCTGTCTAACCAAGAAATACTCTCTTCAAGTTTTCATTTGGTGCAAAAATTGCTAACAAGTGTCTTTCTGCCCTC TTGTTGCACTCTTCAAGCCATTACGATGATTGATTTGTGTCAAACGAAAGGGAATCATTTGTGTGCATAACTTTCAATAT AAAAATAACTGAGATTTAAGTAGGTTATATGGATATTGCAATTTCTATCGTTTGTGGTTTATTTGACATACTGATTAATA ACATATTAGGTTTTACATAATCTTTGCATAAAAATGAATTTCAGCCAAAGGTTCTATGTATCTTTTTGATTAGGGGTGGG AATAGGCTGGATCGAGCTAGGCTTTGTATAAATAGGCTTGACCTAATAAAAATTAAGGCCTAAGTCTGGCCTGTTCCTTG TCATAGGCTTTAACTTTTTTCCCAGTCTGGCCTCCTTGAAACCCTGGCTTGACCTCATAGCCTATTTAAAGACATGTTTC ATAGTAAGTCTCTTTACGTAGGCCAACAAATCTATATGTAAGAGGCTAGCAGACTTATAGGCTTACGGGTTAAATTATAC AATAAAACAAGTATTTCTAAAGAGATCAGCAAGATTATAAGATAATAGGTGGGGGTGGAAGTATGCTATATAATGATGGG TTTTCCAGGGTTTGAAAGCCTATCTAAAATCCTACTTCCGACTTCGCATTTAAATTGATCATAAATATATTTGTAAATAG ACTTATATCCATAAATCATTATATAAGTCAACTTGTTTAAATCTATAAATATGTAAATAAGTATATTATAGTGAGAGTCT GAGAGATATTATACTAAAAATTCTATCCTAACAATAATAGCAATGATAAAATATATTTATATTAGTTAAATTTATTTCAA TAGGCTTGCCTGTTAGGCTTCCAAGGCCTTTTGAAAAGCCTGAGCCTAACCTTTTTAATCAAATAGGCTTGTAAACTAGC CTAGGTTTTGTTTATTTATTAATTTACTTATTAATTAATTTACTTATTAATTTGGTCTGGCTTGGGCTTGGCCATAGGCC CCTACAAACGGCCCGGCCTATTCCCACCCCTATTTCTGATTATAAGATTTTCTGAACATAGAATAAGCTTTTCTAACCGC ACACTAAATTGTTGCATTGATCACGCCATCTCTCTTTTCAGATGTTCTTTTTTGCCAATAATGAAGTTTCAGTTGATGAG GCTGAGTTCTGGGAGAAGAGTTATTTATTAAGAATGCTACAACATAGTAAGTTAGTTGCTGAGTTCTCCACAAATTATGT TGGTGATTCTGTGCCAGCATCGAATGACAGAAAGGAAATGGGAAGGAGGGAATCCATCTCTTTATCTAGTACAATTAAAG GAAAAGAGCAGAGCATTAGAGACCGTCCAGCTTGTCCTTTTTTTATCAAGGATTTAGCTAAGTCAATAGTTTCTGCTGGA AAATCTTTGCAACTGATGCGCCACATCCCTAGTTCCTTACCAGTACGGAGCAAAGGAAGTAATTGTGAGATTGGAAATAC CAGATACGTAAACTATGGTTTGTTTCCTTCTCAGAGAATGGCTGGGCTTACACTGTCGGAAATTTTTTCTGTATCACTAG CTGGACTTATTGGTCACGGTGACCATGTCTGTAAATACTTATGGCAAGATGACGGGGATGAATCTGTATCTGTTTCTTCC TTTATATCTCACATAAATGAGGAAAAAACAAGTAATGACAATATTGAAAATTTAACTGCTCCATCATACTTGGAGAAGAT CTGGTATAAGTTCTTGACTGATACATTACTTGAGAAAAGATCATCTGATTTGAAACTAAAATATGAAGACACAAAAAATG ACACAAGAGACCAGGGAGGGGTTAGAGTTGTTAAAGATGAATTGCTTCTCTTGAGATCATGCTTAGAAAATCCAGTAATT ACCGTGTGTCAAACAAATCTTGGAAAGAAGAATAGAGATGCTCTGGAAGCGTTGAATTTATCTAAAAATTTCTGTTTGCC TTCTTTAAATGATGAGGATTTAAGAAAGGCTATATATGGTAAAGAAAGTACATCATTTTCTGATACTGAAGGAACAAACT ATACTTTTGGTTTTCAGTATGGTGAATCTGAGTACATTTGCTCTCAGGATGAGAGAAAGCTGTTAGAAATGTTGTTTCCT TTTCCTACCATTTTGCCTTCGTTTCAGGTATTTCTACTTTGTATCCTGAGCAGCTTTAGATGAAGTTTGCAGTATTTTGG GGTATTAAACGAATATTTGATTTGAAACAGGATGATGTTCCTGTGTCAGAGCTCTTGCCTTTCCAGAGAAACAGCACTCT TCCTTCCCGCGTTCTTCGCTGGATGCAAAATGTTGACCTAAGAACTACCCCACTTCCTCTGGTTATTATGCAGTACTGTC TAACCATCTATATTCAGAAACAGGTGAATTAAAATGAGCCAACTGATAAATCCGGAATTTAATGTTATGATAATCATTAA TTGCTTGATATTGAATTGAACAGGTGGATTATATTGGAGCGAATATGTTGTTAAAGTTGATGAATGATTGGAGGTTGATG GAAGAGCTTGCAGTGTTGCGTGCTATATACTTGCTTGGTTCAGGTATTAGCTGATTATATTTTTACTGTTTTCTACATTA TCTTGCTTCAATATCTTCTTTTATCACTCTACATTGGGTAGGGTTGATAGTGGTATCTTTGTCTTATTGATTTTTTTTTT TTCTCATGCAGGTGATTTGCTACAACACTTTTTGACAGTAATTTTCAATAAGTTAGATAAGGGTGAAGCATGGGACGATG ACTTTGAATTAAACACAATATTACAGGTAGAGTTACTTGATTTTCTCAAACTGTTTGCTTTGCTTTTGGTATACTTTCTG GTTCTATTTTATTTAGATTCCCACCTGCTGCAATTTATTCTTCGATTTGGAATAGGAAGTTAATTCTTAGTTTTAATTTT GTGTGTTAAATTTACCTTTGGTTTGAAATTAAAAGAGTGAGTTGTGAGTTAAGTGCATCATAAGTGACAGCAAAAGTTCT TTGGCTAATTCCACCCAGAAAGGAAATTTATAGTGTGCAAGACAACTAGGAAGGACCTATGTAGCCCATCTTTGTGGCTA ACTATATATAGCTATATCCATTCCCTATGCATGTGTGTCTCTTTATTATAGTATTGCTTAACAAGGATGAAGTACTATTG GCATTGCACGTAGGTTATTTGATTTTCACATTTTTGCTACTTTCTCCGTGGCGTGATTTTGACCAATCATTTTTGGCTTT CTTGCTCTGTTTACGCCTTTACGGTTCTTAATTTATTGTCATATGATGTTTTATTTTCTGGATTAATCTTTCTCTCTTAT ATCTCTGCATTCTACTGGTTTGGAACTTACTATAGAGCTAAAACTTCTAGATTCAAATTCTACCTAGCATGCAAGTATTT GACCGCATTATCACAACTACAACATTGAATTTTTGAATATTATGAAGTTGTTCATTGTGGATGTACAGGTTTGGCAAGTT GTTAATTCTGTTGTTTGCATGGTTTTATTTACTAAATTTAGGAATCCATATATAACTTGTTTTTTATTCTATTTCCTCTT CATAATCTATCTACGCAAATTCATTACAGGAATCAATCAGAAATTCTGCTGATTGTATGCTGTTAAGTGCTCCAGATTCA TTGGTAGTGTCCATAACAAAAAATCTTGCTGACAGTGTTGAGGAAGCTAGCACAGCCGGCATTGGTTTGAGTTCTCCTCA CAAAAGTCATGTCAATAGTTTTGGAATTAATGGCCTTGATATGCTCAAATTCACATATAAGGTCATTCTTTAACCAATTT ATTTTACCTTTCTAGCTGATTCTTCTTTATTAAGAAGATTGGTTTCCACACAAAAAATAAGGTTATATTGGAAATTTGGA ATTGGCAGGTGCCTTGGCCTCTTGAGCTCATTGCAAACACAGAGGCAATTAAGAAGTACAATCAGGTATCTGGCTTGTCT TTGGGATTCTCTCTCTTTTTTTCCTTGACCTTTAGTCAGATTAGGATATTTCTTCCTGGCTCGTGCTATGTGGTTGCTTC TTCTTGCTTGTGTTAACCTGCTCCTTTATATGTATACCTTAGGTGATGCGGTTCTTGTTGAAGGTCAAGCGTGCAAAATT TGTTTTAGATAAAGTGCGGAGATGGATGTGGAAGGTGCTTCCATATATTACTTGTATTTCTCTTCAGTGGAGTATCTGCT CCCTCACCTAAATTTTCTTGGGAAAATAAAATATTGACAATCTGGTTTTATATTTCACTTAAAACTTTGCAGGGCAGGGG ATCTACAGCAGATAACAGAAAATATCATTGGCTAGTGGAGCAGAAACTCCTTCATTTTGTGGATGCTTTTCACCAATATG TGATGGATCGGGTATGTAAGCATTAAAATAATAACAGAAGTCATTGTTCAGGCAGAAGATTTACTTGCAAAGCACACAAA ATGCATGGGACATGGTTAATTGGCACTGAAGTAATGTGTTAGCTTAAACACATAAATGTGGGGCGCAATTGACCCTTTTA GCTGAATTTTGGAGTGGAAGAGGGGGGATATAAAATATAACATGGAGCATACCAATAGACTGGCTTGTTGCAATTTCCTT CATGTTTTCTGGTTCCTTTATGGTTATCACTGATCATTCATTGGAATCTTCACACTAGTTAGATGATCATGTATATATGG TTCTGCATTTTGTTCAAGGAACCTGAGCATTTTACCTACCCCTACAATTTGTGTGCAGGTATATCACAGTGCATGGCGTG AACTATGTGAAGGTATGACTATGGCTAAATCACTGGATGAAGTCATTGAAGTCCATGGGGCTTACATTTTATCAATTCAA CGGCAGTGTTTTGTGGTTCCTGATAAGCTGGTGATTTATTGTCTCTCAATCTGGGTGTTTGTGTTTTCCTTGTATCCTGT TTTGACTGGTTTATGTATAGATTATAATGTAGCAAAGCTTAAGTAGTTTGTGTATTCTTTATTCCATTCAGGGGGCTCTG ATTGCCAGCCGAATTAACAGCATCCTTGGCTTAGCTTTAGACTTTTATAACATACAACAGACACTGAGTAGCGGTGGAGC TGTATCTGCAATCAAGGCAAGGTGTGAGATGGAAGTGGACCGGATAGAGAAACAGTTTGATGATTGCATTGCTTTCTTAC TAAGGGTATTCTTCAGAATTTATTCTACATGCTGCTACTTTGTTACTGCTAGTTCTACTTCTTATTCTAGATGAAAATAA GAGATTTTTTATGCTTTGACCAAAATACACATGCAGCATTGTTTTCATCATGCATCTGTTCATATAAATATGAAAAAGGG AAAATGCTTAAATGAATTATATTCTCTCCATGAGAAATGCTATCGACACTCTTTTATCGGTTGAAGTCCATGTGAGATCC CCTACAATATTTGTCCCACTCCCAATTTGGTGGGACCCACTTGAATTTCAAGTGTTGAAAAATGAGTGTTGGTAGCACCC CTCTTGTTGCTATTGAGTGTCACAAACACCATAATATTATTATCTATTATGTGCTTTGTAACACACTAACACAGGCACAT TGATTTAATAATTAAGATGCTCTCAAATTAAAGAGATAATGATTTTGACCCATAGAAGGCCCACTTTGAAGAGTTGATCA GATACTAGACAAAGCAATAAGTAAACCAATAAAAGGGTTTAGCTCTAAATAACACTTCCGGATAGTTGGTTTTTGGCATA AGCCGATTTTGTTGCTTGATCATTAGTTGTTGGCTCCACATAGTGAATAGAGACTTTGGTCAAAGAGAGTTTGAATATAT TTGATTGATTCTACGGACTTGAAATTGCACTAGTTGAAAGTAAAAGTTCATGTCCTTTGTGAAATGTTGATGCTTACTAG AGCCATTACTTGTGGGAAAAAATATATTATTTGGGAATTATAGTTGAGTTGAGTGCCCAATCAGCCAACATAATTCAATT TGTTGCTTGATTTGTTGTGCGGCTTTTTATTTTCAAAATTGTCCTTCAGGCTTCAACCAACCCGTCCTTGTAACATAATG AGGAGTCATTAATGTTTTGCCATTTCAATACTTTTTACAAAATCACAACATTGTGTTGCAAGATAGCTGATATTTTTGCT ATGGAAAGTGGTCATTCAATGAAATTTTGAAAATAGAAAAAAGATTCACACCGAAATGGAAGATGGTGCATCAAATGGCA CTGAAGACTGGCTGTCCTAATATTTGTGGTGATAGCATTTTACTCATTTGCTTAACACATATTGTAAATAAGGTTGATCG CATTTAAGATTGCATTGTAAATAAGGTTAATCGTATTTAAGATTGCATGTTCTTGTCAGAAAAGTAAAAAGGTTAATGAT GTCTGTGTGGATACTTATTAATGTAATTCTTACCCCTGGCTTTTCAGGTCTTATCTTTCAAACTAAATGTGGGTCATTTC CCTCATTTGGCTGATTTGGTTACCAGAATTAACTACAACTATTTCTACATGTCGGCTAGTGGGAATTTGATGACTGCTTC TAGCTCTGGAGGTGTTACTTCGAGATTGGGGAAGACCTAGTTAGAATCGTTTGATCTTAAGGTGAATAGTTCTGCACCTG CTTTAATGTTGTACAGTGTTTTAGGGAGAATATTGCATTTGCTTGGTCTGAGCTCACTGAAGTGGAAAAGTGTTTGAATT TGTTGTTGACTTGTTGGGGGATCAGGAACCTCTTATGTGAAAATTCCCTCATGGTGAATTTTGAAGTTGTGTCTATCTCT CTTTTCATATGTATTAAATATATGAGACCCTTTAAATACTTATGAGGAGAGATATAGACATAATGTTTCACTTGACATTA TCATTCACTTGAGAGAATCCAAATCCATTGTTGGGAGTGTTGCCAGTAACTGCAGAGCTGATTCTATTGCGGGTTGTGGA GTGCTAGTGAGAGCTGATTCTATTGCAGGTTGTGGAGTGCTAGTGATTTTTTCTTGTACCTTCTGCAGTGATATTTGTGC GTAATTGGGCTTCATGAATTAACTTATAGATGTAAGTGCTCGTTTGGCTTGGTGTATATTTAATGTGTAAAATTATAGGT TCATTTATTTAGGGCTAACTATCATTTTTGTCCTTGTGTTTGTAATGCGGTTTAATTTCCGTCCCACGCCTGAATTTTTT TGATTATTATGCAATGTTATCGGAGCTCCAACCTCCCTCTTATGGTATTATGAAATCAAACCTTGGTATGATACACTTCG AATATATTGACATTCATATTCTTCATCTACTTCTTTCATTTTCAGAAACTTCCATCCTCAGTCCTTCATCTTCATCAACA CCTTAAGCAAATTCAATCCTCGATACAGAATGATTGCAACCAAACTCAACTAAACCATATAACACAACATAAACAAAACA AAACTCAAAATCAAAGTTCTTGCATCCTTTACGATAGTTCCACCAGGATTGCTAAAGCTCCATTTGTCACCCTTAACTTA TCCTTGAAGCACAGCGCACAATCACAACAAAAAAATATCTTAGGGAGGAGAAATCAGAAACAAAAAGAAAAGAGTGAGAG GGAAAAAGAGCTGTTGTAGCTTTTGAATTACCATTGCTTCTTTCTTTCTTGAAGTCAGAAGTCAAGGAATCCATGTCAAT CACAAAGCTTTCGACTTTCTCAGCTGA

Download Genomic Sequence

CDS sequence (LotjaGi1g1v0351500.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGGCGCAGAGGCACAAATTCACCGAAGCTTAATCAACAAAATCTACGCTCCACTCTCCATCGAGTTCCCTTTCGCATC GCCAATCCCTTCTTTACGAACAAATGAACTCGAACTCGTTCGAGGCGTTTTGCGAATGCTGCAAGGGTTTTCTGGTTCCC TTTTCTGTTGGGATCACACTGCACATGCTTTTCATGCCAAGAGCGGAATCTTCGTTACGCATCTCTCCCTCAAGAGCCTC AATTCCCTTCTCAGTCAATTCATCCACGCTGCTTCGTGTCTCCAATTGGTTCAGATTACGCTCAGTAAGGTTGAATCTGC TCCGCCCAAAGCTCCTCCCACTTTGATGGCGTTTTCCTCCTCCGCTTCCGCATGGCTTAAGCGGTTACGGGATATTGCAT TGAAGGAGGAAATGAACATGAACATGAACAATGCAGATGGTCTAATCACTCCCACGTTGTTAGGATTGGCGAATTCTTTA TCAAGTCTTTGCTCAGGTGCTGAGTTCCTGTTGCGAATAGTCAGTGAGGCCATTCCCGCGCTGTATTTTGAGTTTGGGGT GTCTGTGCCGGCAGCAGAACTGGCTGTTCACGTGCTTGACTATCTTCATAAGAAGCTTGATGAAATGTGTCTTGTGCAAG GTGGTGAGGAGGAAGCTTATCAGATGGTGCTTTATATGTACATGGGAAGCTTATTGCCATATATTGAGGGTCTGGATTCC TGGCTTTTTGAAGGAATACTTGATGATCCTTCTGATGAGATGTTCTTTTTTGCCAATAATGAAGTTTCAGTTGATGAGGC TGAGTTCTGGGAGAAGAGTTATTTATTAAGAATGCTACAACATAGTAAGTTAGTTGCTGAGTTCTCCACAAATTATGTTG GTGATTCTGTGCCAGCATCGAATGACAGAAAGGAAATGGGAAGGAGGGAATCCATCTCTTTATCTAGTACAATTAAAGGA AAAGAGCAGAGCATTAGAGACCGTCCAGCTTGTCCTTTTTTTATCAAGGATTTAGCTAAGTCAATAGTTTCTGCTGGAAA ATCTTTGCAACTGATGCGCCACATCCCTAGTTCCTTACCAGTACGGAGCAAAGGAAGTAATTGTGAGATTGGAAATACCA GATACGTAAACTATGGTTTGTTTCCTTCTCAGAGAATGGCTGGGCTTACACTGTCGGAAATTTTTTCTGTATCACTAGCT GGACTTATTGGTCACGGTGACCATGTCTGTAAATACTTATGGCAAGATGACGGGGATGAATCTGTATCTGTTTCTTCCTT TATATCTCACATAAATGAGGAAAAAACAAGTAATGACAATATTGAAAATTTAACTGCTCCATCATACTTGGAGAAGATCT GGTATAAGTTCTTGACTGATACATTACTTGAGAAAAGATCATCTGATTTGAAACTAAAATATGAAGACACAAAAAATGAC ACAAGAGACCAGGGAGGGGTTAGAGTTGTTAAAGATGAATTGCTTCTCTTGAGATCATGCTTAGAAAATCCAGTAATTAC CGTGTGTCAAACAAATCTTGGAAAGAAGAATAGAGATGCTCTGGAAGCGTTGAATTTATCTAAAAATTTCTGTTTGCCTT CTTTAAATGATGAGGATTTAAGAAAGGCTATATATGGTAAAGAAAGTACATCATTTTCTGATACTGAAGGAACAAACTAT ACTTTTGGTTTTCAGTATGGTGAATCTGAGTACATTTGCTCTCAGGATGAGAGAAAGCTGTTAGAAATGTTGTTTCCTTT TCCTACCATTTTGCCTTCGTTTCAGGATGATGTTCCTGTGTCAGAGCTCTTGCCTTTCCAGAGAAACAGCACTCTTCCTT CCCGCGTTCTTCGCTGGATGCAAAATGTTGACCTAAGAACTACCCCACTTCCTCTGGTTATTATGCAGTACTGTCTAACC ATCTATATTCAGAAACAGGTGGATTATATTGGAGCGAATATGTTGTTAAAGTTGATGAATGATTGGAGGTTGATGGAAGA GCTTGCAGTGTTGCGTGCTATATACTTGCTTGGTTCAGGTGATTTGCTACAACACTTTTTGACAGTAATTTTCAATAAGT TAGATAAGGGTGAAGCATGGGACGATGACTTTGAATTAAACACAATATTACAGGAATCAATCAGAAATTCTGCTGATTGT ATGCTGTTAAGTGCTCCAGATTCATTGGTAGTGTCCATAACAAAAAATCTTGCTGACAGTGTTGAGGAAGCTAGCACAGC CGGCATTGGTTTGAGTTCTCCTCACAAAAGTCATGTCAATAGTTTTGGAATTAATGGCCTTGATATGCTCAAATTCACAT ATAAGGTGCCTTGGCCTCTTGAGCTCATTGCAAACACAGAGGCAATTAAGAAGTACAATCAGGTGATGCGGTTCTTGTTG AAGGTCAAGCGTGCAAAATTTGTTTTAGATAAAGTGCGGAGATGGATGTGGAAGGGCAGGGGATCTACAGCAGATAACAG AAAATATCATTGGCTAGTGGAGCAGAAACTCCTTCATTTTGTGGATGCTTTTCACCAATATGTGATGGATCGGGTATATC ACAGTGCATGGCGTGAACTATGTGAAGGTATGACTATGGCTAAATCACTGGATGAAGTCATTGAAGTCCATGGGGCTTAC ATTTTATCAATTCAACGGCAGTGTTTTGTGGTTCCTGATAAGCTGGGGGCTCTGATTGCCAGCCGAATTAACAGCATCCT TGGCTTAGCTTTAGACTTTTATAACATACAACAGACACTGAGTAGCGGTGGAGCTGTATCTGCAATCAAGGCAAGGTGTG AGATGGAAGTGGACCGGATAGAGAAACAGTTTGATGATTGCATTGCTTTCTTACTAAGGGTCTTATCTTTCAAACTAAAT GTGGGTCATTTCCCTCATTTGGCTGATTTGGTTACCAGAATTAACTACAACTATTTCTACATGTCGGCTAGTGGGAATTT GATGACTGCTTCTAGCTCTGGAGGTGTTACTTCGAGATTGGGGAAGACCTAG

Download CDS Sequence

Protein sequence (LotjaGi1g1v0351500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MGAEAQIHRSLINKIYAPLSIEFPFASPIPSLRTNELELVRGVLRMLQGFSGSLFCWDHTAHAFHAKSGIFVTHLSLKSL NSLLSQFIHAASCLQLVQITLSKVESAPPKAPPTLMAFSSSASAWLKRLRDIALKEEMNMNMNNADGLITPTLLGLANSL SSLCSGAEFLLRIVSEAIPALYFEFGVSVPAAELAVHVLDYLHKKLDEMCLVQGGEEEAYQMVLYMYMGSLLPYIEGLDS WLFEGILDDPSDEMFFFANNEVSVDEAEFWEKSYLLRMLQHSKLVAEFSTNYVGDSVPASNDRKEMGRRESISLSSTIKG KEQSIRDRPACPFFIKDLAKSIVSAGKSLQLMRHIPSSLPVRSKGSNCEIGNTRYVNYGLFPSQRMAGLTLSEIFSVSLA GLIGHGDHVCKYLWQDDGDESVSVSSFISHINEEKTSNDNIENLTAPSYLEKIWYKFLTDTLLEKRSSDLKLKYEDTKND TRDQGGVRVVKDELLLLRSCLENPVITVCQTNLGKKNRDALEALNLSKNFCLPSLNDEDLRKAIYGKESTSFSDTEGTNY TFGFQYGESEYICSQDERKLLEMLFPFPTILPSFQDDVPVSELLPFQRNSTLPSRVLRWMQNVDLRTTPLPLVIMQYCLT IYIQKQVDYIGANMLLKLMNDWRLMEELAVLRAIYLLGSGDLLQHFLTVIFNKLDKGEAWDDDFELNTILQESIRNSADC MLLSAPDSLVVSITKNLADSVEEASTAGIGLSSPHKSHVNSFGINGLDMLKFTYKVPWPLELIANTEAIKKYNQVMRFLL KVKRAKFVLDKVRRWMWKGRGSTADNRKYHWLVEQKLLHFVDAFHQYVMDRVYHSAWRELCEGMTMAKSLDEVIEVHGAY ILSIQRQCFVVPDKLGALIASRINSILGLALDFYNIQQTLSSGGAVSAIKARCEMEVDRIEKQFDDCIAFLLRVLSFKLN VGHFPHLADLVTRINYNYFYMSASGNLMTASSSGGVTSRLGKT

Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Prediction algorithm	Identifier	Start	End	Length	E-value	InterPro ID
PANTHER	PTHR19302:SF33 View details on PTHR19302:SF33 Search for proteins/transripts with this domain View external data on PTHR19302:SF33	10	980	971	2.2E-229	–
PANTHER	PTHR19302 View details on PTHR19302 Search for proteins/transripts with this domain View external data on PTHR19302	10	980	971	2.2E-229	IPR007259 Show description in modal box View details on IPR007259 Search for proteins/transripts with this domain View on EBI InterPro Service
Pfam	PF17681 View details on PF17681 Search for proteins/transripts with this domain View external data on PF17681	40	365	326	6.5E-23	IPR041470 Show description in modal box View details on IPR041470 Search for proteins/transripts with this domain View on EBI InterPro Service
Pfam	PF04130 View details on PF04130 Search for proteins/transripts with this domain View external data on PF04130	664	980	317	1.4E-72	IPR040457 Show description in modal box View details on IPR040457 Search for proteins/transripts with this domain View on EBI InterPro Service
Gene3D	G3DSA:1.20.120.1900 View details on G3DSA:1.20.120.1900 Search for proteins/transripts with this domain View external data on G3DSA:1.20.120.1900	664	979	316	2.7E-73	IPR042241 Show description in modal box View details on IPR042241 Search for proteins/transripts with this domain View on EBI InterPro Service

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0000226 View details of GO:0000226 AmiGO InterPro QuickGO	Biological process	Microtubule cytoskeleton organization	A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins.	Subterm of View details of GO:0007010 View details of GO:0007017
GO:0000922 View details of GO:0000922 AmiGO InterPro QuickGO	Cellular component	Spindle pole	Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules.	Subterm of View details of GO:0044430 Part of View details of GO:0005819
GO:0005815 View details of GO:0005815 AmiGO InterPro QuickGO	Cellular component	Microtubule organizing center	An intracellular structure that can catalyze gamma-tubulin-dependent microtubule nucleation and that can anchor microtubules by interacting with their minus ends, plus ends or sides.	Subterm of View details of GO:0044430 Part of View details of GO:0015630
GO:0007020 View details of GO:0007020 AmiGO InterPro QuickGO	Biological process	Microtubule nucleation	The process in which tubulin alpha-beta heterodimers begin aggregation to form an oligomeric tubulin structure (a microtubule seed). Microtubule nucleation is the initiating step in the formation of a microtubule in the absence of any existing microtubules ('de novo' microtubule formation).	Subterm of View details of GO:0000226 Part of View details of GO:0046785
GO:0043015 View details of GO:0043015 AmiGO InterPro QuickGO	Molecular function	Gamma-tubulin binding	Interacting selectively and non-covalently with the microtubule constituent protein gamma-tubulin.	Subterm of View details of GO:0015631

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0351500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

LotjaGi1g1v0351500.1