Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0353000 |
| Transcript ID | LotjaGi1g1v0353000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sulfotransferase; TAIR: AT2G15730.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|P06237|NOH4_RHIML Nodulation protein H; TrEMBL-Plants: tr|V7ASX0|V7ASX0_PHAVU Sulfotransferase; Found in the gene: LotjaGi1g1v0353000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:82466569..82469056) extracted from Lotus japonicus Gifu genome v1.2.
GTTTTTGTTAAGCGTGATTAGCTCGCCAAAGCCTCTGACCCTTTCTCTGGCCACATATCTCTCAAGTGCTAAAACAGAAT TTATGAACCCAAATGCACCTCAACATTCTTTGGATCTATTTTGTTTTCTTTATGGAGATCTTAGATGGAAACCAAAGTAA GCTCTGTGATCTCTTCTCATTGTTAATTGATTCTCAACGTTACCCATTGTAATTTGATACCTGCTTATTAACATTCCTTT GGTCCTGACATGGGTAACTCTTCTATTACAGGACCCTCTGGACATAAAATCTTCCAAGAAATTTCCATTAACATTGAGGT TGGCAGTTTTAGTAATCGCCATGGTTTGTGGAATATACATTTGCTCAATTTATTTAGAGCAAAAAGGTTTAGGCACAAAC ATCAAGTTGTTAGGCTTCACTAACAATGTCTTTAACCAGCCCTGTAATCATCCTTCAAGTGTGGAAGAATGGGAAGTGCC ATACTTGCATTATCCACAACCCAGAACATATAGCAGGTAATTAAAATGCACATACATATGTATACACAATATAATTACAC AATACAATGTAAGTAATATGATTGGGTTTGATTATTTAATGTGGATATAGAATGATTGATGAATGTGCAGAGAGGAGTGT GCTTGCAATCCTGTTCGATTTTTTTGCATTGTGTCAATGCAAAGATCTGGGAGCGGTTGGTTTGAGACACTTTTGAACAG TCATATTAATGTAAGCTCCAATGGAGAAATATTTTCGGTAGGGAAAAGAAGGGAGAACGTTTCTTCTATTTTGAAGACAA TGGATAAAGTGTATAATCTTGATTGGTTCACCAGTGCTTCCAAGAATGAGTGCTCTGCAGCTGTTGGCTTCAAGTGGATG CTTAATCAGGTAGCTAGGCACCATTCTGAAATTAAATTACTCAAGCAAGTTAGAGTACCTCATATTTGTCATTGTTAATA CCAAAATGATCTTCTAGAATCCAAAATAGTGCGGACATTCTTTAAACATTCGCATTGCGGGACCCGAGATCCTGAGAGAT AGTCAAAAATGCATTTTTACCACTTTTTTTGTAACCCCGAATGTTTATTGAATTTCAAATTTCACGAGAATCTACCTATC ATCACTTTTGTAAATAATTTGTGTTTATCTCTTTTTATACGTGTTAAATACCCGTGACACAACCCTCTGAATACTTATAA AGATCCCTAGATACACAAAATCTCATGTGATAATGTGATATGATATGAGAGAACTTTGATCCGAGTTTTAATTCCATGCT TGTTAGCTTGGCTGTCGGCTGAGTTCATTTATACTAGTTTCAAAGTTAACCACTTGCTTCAATTCATCAAATTTCAGCTT CTTTTCTCATCATTTATACAGGGTTTGATGGAGCATCATAAGGAGATAGTGGAGTACTTCGAACGGAGAAGAATTTCTGC TATATTCCTGTTCAGAAGGAATTTGCTCCGGAGAATGGTGTCTGTGCTAGCTAATTCCTATGACAAAGATACCAAACTAC TGAATGGGACTCATAAGTCTCACGTGCATTCTTCGGCGGAGGTCCTTTTTTCCCCTTAGTGTATGTTCAGATATACAACA GAAAATCACGGTGAACCGAAATCATGATGGACAAAAGTAACTTCCCTTAATATTTGCTTCTGCCCACCATGATTTTGGCT TCATCATGCCGTGTATCCAAATATGTACATCTTTCTTACCATTATTCCCCATGTTTTAAAAATTGAACTAGTTCTGCTTC TGCAGGCTAAAATTCTTGCCAACTACAGGCCAGGGATCAATATCACATTATTGATACCAGAGCTGAAGCTAACAGAAGAA ACAGCTAACAAGGCCATTGCATACTTTAAGAACACTCGTCACATTGTACTCTACTACGAGGATCTTGTCAACAACCGCAA TGTAAGGCTAGCTAGTTAAGGAACATGTGTGTTCCGTTTTTACTGGGTGTATGTGCGGGTTTCTATGTTGAATTTCTGTT GATATTTCAATTTTCATCTTCCAGAAACTCAAGGATGTTCAGGAATTTCTAAGGGTTCCATACAGAGATCTAGAGAGCCA TCAAGTAAAGATACATACTGCCCCATTATCAGAGCAAATTGAAAACTGGGATGAAGTCCTGAAAGCACTGACAGGGACGC CATACCAGAGTTTTCTCTAGATACAGTACTAATCAATCTAGCAGATTTTCTTACAAGATTAGGCCAACATCTAATGCTCC TTCTATATTGTACTATGTACATATGAAAGATTTTATGACTCAGCATAAGATATTACAAGTATTTGGATTTTGGTTGAGTT TATATTAGGATTTAGAATGTTAAGCAAATTAATTAATATAAAATATTTAGGCCAATTATGTGGTACCCTGAATTTTTTTG GGTACGGTACCCCGACTAGATGAAATTGTGAAATTGAAGGGCAGAGAAAGAGAGAAGCTTAGACCTTTTAACTTTTGTTG GAATCTTA
CDS sequence (LotjaGi1g1v0353000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAACCAAAGACCCTCTGGACATAAAATCTTCCAAGAAATTTCCATTAACATTGAGGTTGGCAGTTTTAGTAATCGC CATGGTTTGTGGAATATACATTTGCTCAATTTATTTAGAGCAAAAAGGTTTAGGCACAAACATCAAGTTGTTAGGCTTCA CTAACAATGTCTTTAACCAGCCCTGTAATCATCCTTCAAGTGTGGAAGAATGGGAAGTGCCATACTTGCATTATCCACAA CCCAGAACATATAGCAGAGAGGAGTGTGCTTGCAATCCTGTTCGATTTTTTTGCATTGTGTCAATGCAAAGATCTGGGAG CGGTTGGTTTGAGACACTTTTGAACAGTCATATTAATGTAAGCTCCAATGGAGAAATATTTTCGGTAGGGAAAAGAAGGG AGAACGTTTCTTCTATTTTGAAGACAATGGATAAAGTGTATAATCTTGATTGGTTCACCAGTGCTTCCAAGAATGAGTGC TCTGCAGCTGTTGGCTTCAAGTGGATGCTTAATCAGGGTTTGATGGAGCATCATAAGGAGATAGTGGAGTACTTCGAACG GAGAAGAATTTCTGCTATATTCCTGTTCAGAAGGAATTTGCTCCGGAGAATGGTGTCTGTGCTAGCTAATTCCTATGACA AAGATACCAAACTACTGAATGGGACTCATAAGTCTCACGTGCATTCTTCGGCGGAGGCTAAAATTCTTGCCAACTACAGG CCAGGGATCAATATCACATTATTGATACCAGAGCTGAAGCTAACAGAAGAAACAGCTAACAAGGCCATTGCATACTTTAA GAACACTCGTCACATTGTACTCTACTACGAGGATCTTGTCAACAACCGCAATAAACTCAAGGATGTTCAGGAATTTCTAA GGGTTCCATACAGAGATCTAGAGAGCCATCAAGTAAAGATACATACTGCCCCATTATCAGAGCAAATTGAAAACTGGGAT GAAGTCCTGAAAGCACTGACAGGGACGCCATACCAGAGTTTTCTCTAG
Protein sequence (LotjaGi1g1v0353000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
METKDPLDIKSSKKFPLTLRLAVLVIAMVCGIYICSIYLEQKGLGTNIKLLGFTNNVFNQPCNHPSSVEEWEVPYLHYPQ PRTYSREECACNPVRFFCIVSMQRSGSGWFETLLNSHINVSSNGEIFSVGKRRENVSSILKTMDKVYNLDWFTSASKNEC SAAVGFKWMLNQGLMEHHKEIVEYFERRRISAIFLFRRNLLRRMVSVLANSYDKDTKLLNGTHKSHVHSSAEAKILANYR PGINITLLIPELKLTEETANKAIAYFKNTRHIVLYYEDLVNNRNKLKDVQEFLRVPYRDLESHQVKIHTAPLSEQIENWD EVLKALTGTPYQSFL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 20 | 20 | - | – | |
| PANTHER | 3 | 335 | 333 | 1.2E-197 | – | |
| PANTHER | 3 | 335 | 333 | 1.2E-197 | – | |
| TMHMM | 21 | 40 | 20 | - | – | |
| Phobius | 21 | 39 | 19 | - | – | |
| Phobius | 40 | 335 | 296 | - | – | |
| SUPERFAMILY | 75 | 299 | 225 | 9.11E-15 | ||
| Gene3D | 94 | 324 | 231 | 7.7E-25 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0353000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…