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LotjaGi1g1v0360900.3

Overview

Field Value
Gene ID LotjaGi1g1v0360900
Transcript ID LotjaGi1g1v0360900.3
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Adenine phosphoribosyltransferase-like protein; TAIR: AT1G27450.1 adenine phosphoribosyl transferase 1; Swiss-Prot: sp|P31166|APT1_ARATH Adenine phosphoribosyltransferase 1, chloroplastic; TrEMBL-Plants: tr|I3SH66|I3SH66_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0360900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:83580812..83584469) extracted from Lotus japonicus Gifu genome v1.2.

ATGATATGATACATGACCCATAGCATAGATTAGGAAAGTGAAATTGAAAACATTAAGAGAAAAGAGAATGCAGTCAAGTA GGGTGCTCTTGTGCTCATCCACCAATTCATTGTCGGGGTCAGCCGTCACTCCCACACTTGCCTCTTTTCCCAGATTCCCA GCACCACTCTCAGCAAAGATCGCAAACTCAACATCATCATCATCATCATCCTCCTCGATTCGCTTCCAAAATTCTCCACC ACTCCGCTCCACTGCTTCTTCTTCTTCTTCCTGTACAGTAACAGTAGTTCCCTCTTTCTCTCTGATCTAATTTTTCCATC TTCACTGTTTTTCTCTCTCGTAACGGTTCTTCCTCTTCCTGTGTTTGGTTCAGCAGCGAATATGGCTTCGCAAGACCCGC GCATAGCAACAATCTCCTCTGCGATCCGAGTCATTCCTGATTTTCCCAAGCCAGGTAGGTCAATAGTCAATACTCTTTTT CTGATTTCTGATTTGTTTTTGTTGAATGTTGTGATGTGGTTTGGTTATATGATTTTGATTGAATTGCATTCGTTGTTTGT GAATTGAATTGTGTTGTGCCTATCAGGTATCATGTTCCAGGATATAACCACTCTGCTTCTTGATCCCAAGGCTTTCAAGG ATACCATTGACTTGTTTGTTGAGAGGTACAGAGATCAAAACATTTCTGTTGTCGCAGGTACTGTCCCCCATACCACACTC CCTGGCCTTATTTCAATTCTATATGTAATTCCATGTTTAGGGTGTGTGTGGGTAAACACCTTAACTTCTTATTCATAAGC TAATTTGAACAACTTATGAAAATAACCTCAAAACAACTTATAGGTACGGCATAAGGCTCTCACAAACACTTGCATTAAAC TCAAATCAGCTCTTCCAAATGGGGCCTTAGTTGGTCTTTATCAACTTATGATCATCTTGTGAATGATGCCCAGATTCCGT TAAAATAACTGAGTTTCTCAGTTTCTGTTTGTTGTTGTTCTAAATCCTTTTCCATCAGGGCAAGGGGAGTTTTGAGTTTC CGTCGTCACTCACTCGTTAACAATGGAGAATAATCTAAACAAGGCTTAACTTAGTACACTATCATATGTTCAGCTTTTGA TATTATGATAATCAACACTCCTGGCTCTTTCTTTATAACAATTTCTAATCTACAATTTTTGATAAATGGAAGCATTGTTT TGTTTTTCCTATGGGCAGCACAAGTCGTTATTGTTTCCTTCTCTTGAAGGGTTTCAGATAAATTGTTTTTATGGTCAACA ATTTCTAATCTGCTACTATTATAAATGGCGGCATTGTTTCCTTGCCTATGGGAATGAGTTATTCCTGTGTCTTTCTCTTG ATGGGTTTCGTGTACCATGTTCATAATGCTTACTGGCATGATCTCGGGAATGACAAAATTTTGGGCACTTGTTTGAGGAT TACATTGCGTAATTCATTCATTTCTATGGTTTCCATACAAACTGGGATATTTTATGATTCCAACATCAGAAGATAGTAGA AGCAAAGTTAGTTTACCAATCAGCACCCAAGTCATTAAAATTCTGGATGGTTCAGTTTTATATTGTTGTTTTTGGTATCT GCTCAATATAAGTTACTAATTTGTGTCTCATTTACTCATAGCTTTATTTATGACATGATGCAGGCGTTGAAGCAAGAGGT TTTATATTTGGCCCTCCCATTGCATTAGCCATTGGTGCAAAATTTGTCCCCATGAGGAAACCCAAGAAATTGCCAGGTAC ATGTTTTGCGCCTTTCTTTTGAAATAAATGCATTTAACCTTATCAGGATTTCCTACTAGCAGTTAGCATATAATTTTTGG TTGGAGGCCTTTGAATATCTGAATTGCATATGGTCTTCTAATTTTAATATTTGTGTACTTCACTATGCAAATTCAGTTGT TGAAAGTTCTTGAATATTATGTGACGGGGGAAGATCTTTGATTTGTCTGAATGGTTGTATTTTTATTATTTTTTCAGGAC CGGTTATCTCAGAAGAGTATTCGTTGGAGTATGGAACTGATAAAATTGAGATGCACGTGGGGGCTGTACAAGCTGGAGAA CGAGCCTTGATCATAGATGATCTTATTGCTACTGGAGGAACGTTAAGTGCTGCAATTAGGCTACTAGGTAACGTTGCAAC ATGATTGCTTAATTGGCTGTGCATTCTATGTATGAGCTTGTCCCAGCCTAGATACCCACTTCCTTGTTTTGTTTCATATG ATGGGTCTATCTCCTTAATGAAATGAGGGTTTGTGTGTCTTACATTGTAAAAAGAATATGTAGTTTTCTTTATGGATTAA AAGCCTTTAGAAGTTTTTGAAATGAGCAAATATGGGCTTAACTGCTACTGAATCGGGAAAAAAAATCATCCTATCAAAGT TAGCAGAATCATGATTTTCTTTCTTATGCATATGTGAATTATCATTATTATGGAGACAATTGGATAACCTATACCTGGGT AACAGAATCATGATTTTCTGTTTTACTTGGAAGTGTGTTTGTTTTATATAATGTTTGATGCTTAACTTGAGCATTTGAAT ACATTCTTAGTTGTTCTGTTTACACTTTCTTTATTGCAGAACGTGTTGAGGTGCAAGTTGTTGAGTGTGCTTGTGTGATT GAATTACCAGAGTTAAAGGTACCACCTTACACATATATATCTCCTTGGCTAATTGTTTTGCCTACTTCACTTCTTCTGCA TATACTTTTCGTGACTATTTATTTTTTGTTTCGTAAAAAATAAACACTGAAATCTGGAGGACAGTTATCTTTGTAAGTTA CATTTTACATTTGAGAAACTCAAGCAATATGAGCAGAAATAAATAACGATACTAAAATTTGAATTGTATCTTCAAATTTT GTTTTCTAAAGAGACATTAATTTCAACATTTCTTGCGTAGACAGAAAGTAATTTGCACACTGAGCCAATAGGAATGACTT GGTTTGATATTTTCTAGTTTAAGTACCACCTACTATGATTTGTCAAGCCAACTAGGTTTTATTAGTTTAATGGCCAAACT GAATATGCACAATGTCTACCGAAGAATGCCTCATCAATCCCTTGCATTTCTTGATTCTGGGACATGAGTTCTTTGTAATT GCTATAATTTCCTTCATGTGGCTTATTTCAGGGGCGGGAAAGGCTGGGCGACAAGGCGCTATTCGTCTTAGTTAATGGAT CTTGATATTTACTCTGGTGATTGTCTTTTAGTTATTAACCATTTGAGATGGCTCTTGGGGGTTATACGCTTAGTTCTACT TAATTTTCCTTTTAAACTTTCTATGTGCCGCTTTTGGTTTGAAACTCTTAATTTATAGTGAAGAGCCATTTGAGAGCTCA GGCTCGAGTTCCATGCAACATTACCCTATTTTTATATTGAGGAAATGATGGCTGTAATAAAGTTCTTGTTTGCCATTTGG TATCACAAGATCCTAAGTTTAGGATTATTATTATACTATGAGTTGTATTGGGAACGTGAATCCTACATGATGGATTTGGG TCCCCTGTGGTTTCAAAATATATCACCGGGACCATTTGATATTATTTAGTACTTGCAAGGCTTTTTCTCTATGCTCAACC GGTAATCAAATAATTCACTTGTGTATCATGAGCTTACATGTATCCTAATAATATAGTA
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0360900.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCTTCGCAAGACCCGCGCATAGCAACAATCTCCTCTGCGATCCGAGTCATTCCTGATTTTCCCAAGCCAGGTATCAT GTTCCAGGATATAACCACTCTGCTTCTTGATCCCAAGGCTTTCAAGGATACCATTGACTTGTTTGTTGAGAGGTACAGAG ATCAAAACATTTCTGTTGTCGCAGGCGTTGAAGCAAGAGGTTTTATATTTGGCCCTCCCATTGCATTAGCCATTGGTGCA AAATTTGTCCCCATGAGGAAACCCAAGAAATTGCCAGGACCGGTTATCTCAGAAGAGTATTCGTTGGAGTATGGAACTGA TAAAATTGAGATGCACGTGGGGGCTGTACAAGCTGGAGAACGAGCCTTGATCATAGATGATCTTATTGCTACTGGAGGAA CGTTAAGTGCTGCAATTAGGCTACTAGAACGTGTTGAGGTGCAAGTTGTTGAGTGTGCTTGTGTGATTGAATTACCAGAG TTAAAGGGGCGGGAAAGGCTGGGCGACAAGGCGCTATTCGTCTTAGTTAATGGATCTTGA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0360900.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MASQDPRIATISSAIRVIPDFPKPGIMFQDITTLLLDPKAFKDTIDLFVERYRDQNISVVAGVEARGFIFGPPIALAIGA KFVPMRKPKKLPGPVISEEYSLEYGTDKIEMHVGAVQAGERALIIDDLIATGGTLSAAIRLLERVEVQVVECACVIELPE LKGRERLGDKALFVLVNGS
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.40.50.2020
1 177 177 2.6E-71
IPR029057
PANTHER
PTHR11776
2 177 176 2.5E-101 –
PANTHER
PTHR11776:SF8
2 177 176 2.5E-101 –
Hamap
MF_00004
11 178 168 35.75
IPR005764
SUPERFAMILY
SSF53271
11 172 162 4.44E-51
IPR029057
TIGRFAM
TIGR01090
12 176 165 3.1E-64
IPR005764
Pfam
PF00156
37 173 137 1.9E-20
IPR000836
CDD
cd06223
45 175 131 2.57006E-25
IPR000836

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003999
Molecular function Adenine phosphoribosyltransferase activity Catalysis of the reaction: AMP + diphosphate = adenine + 5-phospho-alpha-D-ribose 1-diphosphate.
Subterm of
GO:0005737
Cellular component Cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
Subterm of
GO:0006168
Biological process Adenine salvage Any process that generates adenine, 6-aminopurine, from derivatives of it without de novo synthesis.
Subterm of
GO:0009116
Biological process Nucleoside metabolic process The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (a ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleoside), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine).
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0360900.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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