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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0364300 |
| Transcript ID | LotjaGi1g1v0364300.8 |
| Related isoforms 7 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Branched-chain-amino-acid aminotransferase; TAIR: AT1G10070.1 branched-chain amino acid transaminase 2; Swiss-Prot: sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic; TrEMBL-Plants: tr|A0A072V3G0|A0A072V3G0_MEDTR Branched-chain-amino-acid aminotransferase; Found in the gene: LotjaGi1g1v0364300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:84030268..84033061) extracted from Lotus japonicus Gifu genome v1.2.
AATATAACAAAGATCATGTGATAGCAGATGGGGACTTACAACAGCTATGCATCTCAACCCTCCCCTCTTGAAATCCCAGA CCAAAGTTACAGGTGAGTTAATTATTACTCCTTCCATTAAGTATTGACAGTAAGAAAATTTTAAGGGGTTAACGTGTATT AGAACAACAGTTAACTTGTCTTTTAAGGGGTTAAGTTGTTATTGTTCTGCATTTTGACAAAAATCTAGTGATGATGAATA TGCCAATGTTGATTGGGACAACCTTGGATTTGGACTGATGCCAACTGATTACATGTACGTTGATAAATGCTACGCTGGTA AGAATTTTGTACGAGGACAACTCACTCGTTATGGAAACATTGAACTTAGCCCATCAGCTGGGGTCCTAAATTATGGTCAG GTACGATGTGTCCAAAAATACTTAATACCCGTTTGGATGGAAATTAAAGAATAATTAATAAGTGATTGTCTTCATCCCTG AAATGTGAAATTTAGGGATTGTTTGAAGGCACGAAAGCATGCAGAAGCGAAAATGGGCGATTGCTGCTCTTCCGTCCAGA GGAAAATGCCATCCGCATGAAGATTGGCGCCGAGAGAATGTGCATGCAATCCCCTTCAATCGATCAATTCGTCGATGCTC TCAAGCAAACTGCACTTGCAAACAAGCGTTGGGTAAGATCATCCTAAACTAAATCAATGCATTTCAATGATTTCGTGTTA CATTTGAATTTCCTCACACAATTGATGTAAACCCTTATCAGATTCCTCCACCGGGTAAAGGATCATTGTATATGAGGCCT CTCCTCTTAGGAAGTGGTCCAGTTTTGGGTTTGGCTCCTGCACCTGAATACACTTTCCTTGTATATGCTTCCCCTGTTCG TAACTATTTCAAGGTTAGTGATACTTCGTTTGATTTTTCATTTTTCCTCACTTGAATTTACTTCAAAACTTCAATCTTGC TTCTTTAATTTGTACCCACCACAGGAGGGTTCCGCGCCGCTTAGCTTGTTCGTGGAGGAGGATTTTGACCGTGCTTCTCG CCGCGGCACCGGGAGTGTTAAAACCATTTCTAATTATGCTCCGGTAAGCATTTTTATGTCTTTCAGTTTTTCACTGAAAC CAAACAAAACAATATTATTATCCTCTGTGTAAATTAAACATTAGTACAATATGCAATGGTTTAGTTTTTGTTCATTTTTA TTTTTTTTAGCTGGGAAATCTTCGTTTATGCAAGCTTATCTTATTTGTTGGTGACAGTTTTCCCCAATTTCTTTGACTGT TATTTTTTTTTTCATCACTATCATGTGATTTAGCGTGCGTGTATTTTGAATTCATATGATATCATATCAGTAAATGATAT GTAAAGTATATGAATTTGGACAAAAATGTAAAAGGGATATTGGAGTATTCAATTGTACCACTTGTCTTGACGTGTAGGTC TTAATGGCACAACTTAGAGCCAAGAACAGAGGATTTTCGGATGTGCTATACCTTGATTCAGAGACCAAGAAAAATCTGGA GGAGGTCTCTTCTTGTAACATTTTTATTGCCAAGGTACTATTCTTGTAGCATTTTTTCTTTTCAAGCATGTTGCAATGCC GCATATGATGAGTGGCGAGAAACAACAAAAGAAAAATGTACACCAAGTTAAAACTAGTGTTGTAAGCTAATGAAGGCATA CATGAGTCTTTCAAAACTGCAATTCCAGAACTATAAGTTACGATTTAATGCTAGAAATTACAGAAAACTGATTAAAATAT GTAAGTAGATGTCATCAAAAGTTTTGGAGACTTTGCATGTAAGCAGGGATTGGAATGAATGGGAGGTATTCTCGATATTT GATAGATCATATGATATGGGCAAACATACAACCTAAGATATTAAAAACATAAGGTTGTGTTAGAGAACAGAATTTTAGAC AATTGCAGTTAAGTTGAATTGTTTACCTTCCCGTTTGCGCATGTTACCAAACAATTTAGTGAAATTGTCAACTACATTCA CTTGCAACTGGCCAATCTAATTTGTTTTCTAATCTCATAGGGCAAATGCATCTCAACACCTGCTACCAATGGAACCATAC TTGCCGGAATCACCAGAAAAAGTGTAATTGAAATTGCTGGTGATCTCGGCTATCAGGTAAGAATATATAATAAGTACTTT TGGCTCCTACATTCAATATTTTGTGCTTGTGTTTGGATACTAATTGAGGGCAATGTGAATAGACTTCTGAAGCTAATGGA TTATGGATATCGCAGCATATTGTTTCTGGCTTTTTGAATTCATGATTAGTCTTTCTCACAGACAGTAAAAATTTGAGTAG TCATTCGTTAAGTTTGTTTAAACTACACCAGTTATTGTTAATTAGTTTATATTTTTCTGTTGTTGAAGTTTTCAGCAAAT TAAACTCGTATAATCCATTAGTATTGTCTTCTACAGCAACAACAAAAGACTTATCCTACTCAGTGTAGTATTGTCTTCTA AACCAGTAAAAATAGAAAAATAAATAGGAACACTATAATCTTAAAAAAAGAAAGTCAATACAATTTACATTAAAGTAGTC TTACAAGTTCAAGGAAAACAAATGTTTGAAGTTCAGATCATAGAGTTGATCATATTGGAGCTTTGTGTATTATTTTTCTC TTTCAAATATGCTTACTGCATGACCAAATTTGTTCAGGTGGAAGAGCATGCTGTAAACGTGGATGAATTGATGGAGGCTG ATGAAGTATTCTGCACAGGAACTGCTGTTGGTGTTGCCCCTGTAGGGAGTATCACATACCAGGACAGAAGGTAA
CDS sequence (LotjaGi1g1v0364300.8) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGACTTACAACAGCTATGCATCTCAACCCTCCCCTCTTGAAATCCCAGACCAAAGTTACAGTGATGATGAATATGC CAATGTTGATTGGGACAACCTTGGATTTGGACTGATGCCAACTGATTACATGTACGGATTGTTTGAAGGCACGAAAGCAT GCAGAAGCGAAAATGGGCGATTGCTGCTCTTCCGTCCAGAGGAAAATGCCATCCGCATGAAGATTGGCGCCGAGAGAATG TGCATGCAATCCCCTTCAATCGATCAATTCGTCGATGCTCTCAAGCAAACTGCACTTGCAAACAAGCGTTGGATTCCTCC ACCGGGTAAAGGATCATTGTATATGAGGCCTCTCCTCTTAGGAAGTGGTCCAGTTTTGGGTTTGGCTCCTGCACCTGAAT ACACTTTCCTTGTATATGCTTCCCCTGTTCGTAACTATTTCAAGGTTAGTGATACTTCGTTTGATTTTTCATTTTTCCTC ACTTGA
Protein sequence (LotjaGi1g1v0364300.8) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGTYNSYASQPSPLEIPDQSYSDDEYANVDWDNLGFGLMPTDYMYGLFEGTKACRSENGRLLLFRPEENAIRMKIGAERM CMQSPSIDQFVDALKQTALANKRWIPPPGKGSLYMRPLLLGSGPVLGLAPAPEYTFLVYASPVRNYFKVSDTSFDFSFFL T
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 45 | 43 | 1.6E-77 | – | |
| PANTHER | 3 | 45 | 43 | 1.6E-77 | – | |
| SUPERFAMILY | 21 | 149 | 129 | 2.88E-32 | ||
| Gene3D | 43 | 159 | 117 | 3.6E-39 | ||
| PANTHER | 46 | 153 | 108 | 1.6E-77 | – | |
| PANTHER | 46 | 153 | 108 | 1.6E-77 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. |
Expression pattern of LotjaGi1g1v0364300.8, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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