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Field | Value |
---|---|
Gene ID | LotjaGi1g1v0364300 |
Transcript ID | LotjaGi1g1v0364300.2 |
Related isoforms 7 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Branched-chain-amino-acid aminotransferase; TAIR: AT1G10070.1 branched-chain amino acid transaminase 2; Swiss-Prot: sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic; TrEMBL-Plants: tr|A0A072V3G0|A0A072V3G0_MEDTR Branched-chain-amino-acid aminotransferase; Found in the gene: LotjaGi1g1v0364300 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:84027691..84034987) extracted from Lotus japonicus Gifu genome v1.2.
GCCCCATTCTGATTATTCAAAATGGTGCTTTTCCAAATATGCTGGCAAAACTAACTCTAGCCAGCTGCAATATTTGTATA AATGGTTACACGTATCGCCTAATTGTGCAGATTGTAGAGCTGGTTGTCTTCTTATCATTCTTATTCCTGTGTCTCCCTCC ATTACTTTCACAGATTCATAGCATATCCCAAAACGCACAAAATTCCCACCAACTATATGATGATTCAAAGAACCTCACAG TTTCCATGTTTAAGGAAATTGCTTCTTCGAGCTGGTTATCCCTCTTCTTCCTCCAAGGTGACAAGATCGATTTTGGTACT TTTTCTTGTGCGTTTTTTTTTCCATCGGTGATATGCATGTAAGCTGTATTTTGTTTTAAAAGCTAGCTTTCATGTCTGCT TGCTTCTTTGGTATGTCTAGAAGAAGAAAATCTTGATTCACAAATTAAAATGACTTATCTGTTCAATTTTTTAGTATATT GTAGATAATATGTACTAATTAAAATTAGTAGTAAAAACATGCATGAATCAGTTTTTAACACAGCACACCATAAAATTGCA CTTTAATTGTGAAAATACATGTGGGTCAGAGAGTGAAAAAAAAAAAACATAAATTTCAGTACATATAATTCATCTTTCAT TAATTATATGAAAACATTTTACTGCTTCATTTTTCTTTTTAATAAGGCTTAATTGCACTTTTGGTCCCCCAACTATGGCC TTCCTGCGAAAATCGTCCCTAAACTTCAAAATTAGCAAAACTCGTCCCTCAACTATACACACAGTTGCACTTTTGGTCTT CCGTTAGCATTCCGTCAGAAATCTAACAGATTGGGACTAGTGACGGAGATAATCCGTCACAATTCACAATCCAGTCACCA AATTTCTTCATCTTCCTCAATATAACCACCACTCATCCTCCCCCTCCTCATTCCTCACTTTCTCCATCTTCATCAACCTC AATCCCTCATCCTCCCCTCCCTTCTCCTTTCATTCCTCTTCACCACTACCTCCCTCAACCATCAACACAAACTCTCCATA CTGAAATTGAATTGGAGCGGATTGCTGGAGAGAAAGGGGTTTTGGGTTTTTCTTCAACACTCTTTGCAGATCCCATTTTC TCATCTCCTCATGAAATTAGAAATCCATTTCACAACCCAAAAGAAGGAGTTGCAGACCTCTCCCTCCATATCTTCATCTC ATCTTTCTCACTCGCACCTCTCCCTCCACCGAACCCACACCAGCAAACCACAACCCAGAACCACCTCTCCCTCCACCAAC CCCACCCCTCCCCAGAAACCCAACCGGAACCCACCCCAAACCCCACCCAGAAACTGAGCCCACAAACCCCTTCTTCCCTC TCACAATAGATCTACCATAACTGAGAAAGGAAAACCAGAGAAGAAAATCCAAGACTTTTTTTTTTTCAGATCTCAAACCA TTGTTACAGATACAGCTTCAACCTATCATATGGTGTCTCGAGAGGGGGAGCTCGAAGCTTGTAACCCAGAAACCCGACCA AAAACCCAGAAACTTTGAAGCTTTGAACGAGAACCATGATCTACAGAAGAGGAGGAGGAAGAGGAAACGGATTTAAGTGA GCTTCTTTATTTTTTCAATTAAAATACTATTTTTTCTCAATTTTATTTTTTCTTTATTTTTTAATTCATTTTTAACGGAA TATTCTGTTAGTTTTCTGACGGAATGCTAACGGAAGACCAAAAGTGCAACTGTGTGTATAGTTGAGGGACGAGTTTTGCT AATTTTGAAGTTTAGGGACAATTTTCGCAGGAAGGCCATAGTTGGGGGACCAAAAGTGCAATTAAGCCTTTTAATAAGGA TAAAATATTAAGTATCCATTTTAGTTTGTTGGGGCTTGTACGATTAAATAAAGGAAATTAAATATTCCGGATCATTTATA GTCAACAATATAACAAAGATCATGTGATAGCAGATGGGGACTTACAACAGCTATGCATCTCAACCCTCCCCTCTTGAAAT CCCAGACCAAAGTTACAGGTGAGTTAATTATTACTCCTTCCATTAAGTATTGACAGTAAGAAAATTTTAAGGGGTTAACG TGTATTAGAACAACAGTTAACTTGTCTTTTAAGGGGTTAAGTTGTTATTGTTCTGCATTTTGACAAAAATCTAGTGATGA TGAATATGCCAATGTTGATTGGGACAACCTTGGATTTGGACTGATGCCAACTGATTACATGTACGTTGATAAATGCTACG CTGGTAAGAATTTTGTACGAGGACAACTCACTCGTTATGGAAACATTGAACTTAGCCCATCAGCTGGGGTCCTAAATTAT GGTCAGGTACGATGTGTCCAAAAATACTTAATACCCGTTTGGATGGAAATTAAAGAATAATTAATAAGTGATTGTCTTCA TCCCTGAAATGTGAAATTTAGGGATTGTTTGAAGGCACGAAAGCATGCAGAAGCGAAAATGGGCGATTGCTGCTCTTCCG TCCAGAGGAAAATGCCATCCGCATGAAGATTGGCGCCGAGAGAATGTGCATGCAATCCCCTTCAATCGATCAATTCGTCG ATGCTCTCAAGCAAACTGCACTTGCAAACAAGCGTTGGGTAAGATCATCCTAAACTAAATCAATGCATTTCAATGATTTC GTGTTACATTTGAATTTCCTCACACAATTGATGTAAACCCTTATCAGATTCCTCCACCGGGTAAAGGATCATTGTATATG AGGCCTCTCCTCTTAGGAAGTGGTCCAGTTTTGGGTTTGGCTCCTGCACCTGAATACACTTTCCTTGTATATGCTTCCCC TGTTCGTAACTATTTCAAGGTTAGTGATACTTCGTTTGATTTTTCATTTTTCCTCACTTGAATTTACTTCAAAACTTCAA TCTTGCTTCTTTAATTTGTACCCACCACAGGAGGGTTCCGCGCCGCTTAGCTTGTTCGTGGAGGAGGATTTTGACCGTGC TTCTCGCCGCGGCACCGGGAGTGTTAAAACCATTTCTAATTATGCTCCGGTAAGCATTTTTATGTCTTTCAGTTTTTCAC TGAAACCAAACAAAACAATATTATTATCCTCTGTGTAAATTAAACATTAGTACAATATGCAATGGTTTAGTTTTTGTTCA TTTTTATTTTTTTTAGCTGGGAAATCTTCGTTTATGCAAGCTTATCTTATTTGTTGGTGACAGTTTTCCCCAATTTCTTT GACTGTTATTTTTTTTTTCATCACTATCATGTGATTTAGCGTGCGTGTATTTTGAATTCATATGATATCATATCAGTAAA TGATATGTAAAGTATATGAATTTGGACAAAAATGTAAAAGGGATATTGGAGTATTCAATTGTACCACTTGTCTTGACGTG TAGGTCTTAATGGCACAACTTAGAGCCAAGAACAGAGGATTTTCGGATGTGCTATACCTTGATTCAGAGACCAAGAAAAA TCTGGAGGAGGTCTCTTCTTGTAACATTTTTATTGCCAAGGTACTATTCTTGTAGCATTTTTTCTTTTCAAGCATGTTGC AATGCCGCATATGATGAGTGGCGAGAAACAACAAAAGAAAAATGTACACCAAGTTAAAACTAGTGTTGTAAGCTAATGAA GGCATACATGAGTCTTTCAAAACTGCAATTCCAGAACTATAAGTTACGATTTAATGCTAGAAATTACAGAAAACTGATTA AAATATGTAAGTAGATGTCATCAAAAGTTTTGGAGACTTTGCATGTAAGCAGGGATTGGAATGAATGGGAGGTATTCTCG ATATTTGATAGATCATATGATATGGGCAAACATACAACCTAAGATATTAAAAACATAAGGTTGTGTTAGAGAACAGAATT TTAGACAATTGCAGTTAAGTTGAATTGTTTACCTTCCCGTTTGCGCATGTTACCAAACAATTTAGTGAAATTGTCAACTA CATTCACTTGCAACTGGCCAATCTAATTTGTTTTCTAATCTCATAGGGCAAATGCATCTCAACACCTGCTACCAATGGAA CCATACTTGCCGGAATCACCAGAAAAAGTGTAATTGAAATTGCTGGTGATCTCGGCTATCAGGTAAGAATATATAATAAG TACTTTTGGCTCCTACATTCAATATTTTGTGCTTGTGTTTGGATACTAATTGAGGGCAATGTGAATAGACTTCTGAAGCT AATGGATTATGGATATCGCAGCATATTGTTTCTGGCTTTTTGAATTCATGATTAGTCTTTCTCACAGACAGTAAAAATTT GAGTAGTCATTCGTTAAGTTTGTTTAAACTACACCAGTTATTGTTAATTAGTTTATATTTTTCTGTTGTTGAAGTTTTCA GCAAATTAAACTCGTATAATCCATTAGTATTGTCTTCTACAGCAACAACAAAAGACTTATCCTACTCAGTGTAGTATTGT CTTCTAAACCAGTAAAAATAGAAAAATAAATAGGAACACTATAATCTTAAAAAAAGAAAGTCAATACAATTTACATTAAA GTAGTCTTACAAGTTCAAGGAAAACAAATGTTTGAAGTTCAGATCATAGAGTTGATCATATTGGAGCTTTGTGTATTATT TTTCTCTTTCAAATATGCTTACTGCATGACCAAATTTGTTCAGGTGGAAGAGCATGCTGTAAACGTGGATGAATTGATGG AGGCTGATGAAGTATTCTGCACAGGAACTGCTGTTGGTGTTGCCCCTGTAGGGAGTATCACATACCAGGACAGAAGGTAA TAGTAACTTACATATATAAGAATATTACTTATGTTTTTAGAAAAGAAAAGCTAATTTCTTCTTCGATCATGTATAAACCA GGGTTGTTAATGGCGGATAGCGTAGTGTAGCGGCAAGCCCAAAAAACGCTATTTCAAGCGCTATTGCGGCGCTATAGCGG CAAATAACGCAAATAGCGGTGAATAGTGGAGTAGCGGTGAACCCCCAGGGCGCTACGCTATAGGCTATTGCGCCGCTATA ACGTGCTATTAACAAGCCTGATAAAAACTATATAAAACTTCCTCTCTAGATTACAAATCTTAACTATTTTATTTAACAGG TATAAATGCATCATATCAGTCTAAAATTTGCTGAAATATTGTTATATATCTGCAGGGCGGAATATAAAACAGGTTCCGGA ACCATTTGTCAAGAGTTGTACAAAACTATATCAGGAATTCAAACGGGTACTATTGAAGATAAGAAGGGGTGGATTGTTGA AATTGATTAATACAGTTGCATCTTCTGTTTACATATCTCCTTGTGAATCCTCCCGTTTCTTTGAATTTGTGTATATTCAC CATCATCATAAAACAACCCATTCAAATTTGCTTCAAGTTTTTCTCCAAACCTTTGGATTGTTTACGAATTTAAATCTTCC AAATCCGAACTGTTGCCTTGCAAGTTTTTCTTTCTTACTTGGTACATTCACCACCACCTTCCCCATGGCTAAATCACCAG CCTTAAACTCATTTGATCGTTCTGATATGAGAAAATAGTGAAGTAATAGGAAACTGTGCTGTTGAACTTCACCTCTACCA ATCTTTGCAAGGAATATAATCCTCCTCTTAAGTATCTTTCTCCTGTCAGTAATCACATTGCCCAAAAGTTGCTTCCTCTG CCGAGGCTTAGTCTCCATCGTGACACTACAATTCATTGTTGCTCTCTGGTTTGATGGTTTGATGATCTCTACCTTATTGA CCGCAACTTCTGTATACTTCTGTATTTATTATCTCTGTCTCTCCTTGTTACTGCTTCCAAATTTCAAAAGTAGTTAACTG AAATATGTAAGAAAAATGAAAAAAAAATTGAAAAGGATATAATGATTGGCCATTTCACAGATTCATATACTTGTTTAAGG CATTTCCTTTGTGGGGCGAAAGGAACTGATGTGTTTCCTTCAGAGGAACTCATCATTTTCTTAGTTCACATAGAACAATT GACCTATTAAAATTTCCATGTTTTTCATTTGAGAAAGAAGCTTTTTGTTTTTTCACTTGTTTTGAAAAATGAATTGAAGT GAAAGTAAACGCCAAAACTCAAATGAAGTTTTTGGTAATGTTTTCTGAGCTTAGAAAAGAAATCCTGCTTATAACACACT CAAGTATTGCGTTGATGTCTTTGATAATTTTTGAGTATGTTAATTTTCCCATTAGAAAATCCTGAATCAATTCCGGCAGA GTACAATTGATTCTAGACCAAAAATCTATTCCAGTAAAAGCTAGAAAAAGTAGGTTTTGCGTTGAATATAATTATTCATG AGACTTTAAACAGAACTTCACAACATTACTGAATAAAAATCACTTTTTCATATATGTATTACAATCTCAATTCACTTTGC TGTAATAAATTATACTAAAACCAATAATGATAAATATTGATCCAAACTAGCACTAGAAACATGATTCCTGCTGAGATTTG ATCTTTGACTGAGAGAAAGAGACACATGAGCAGAAAGAAGGATGAGTGAAACCGTAAGTGCTTCTATGACAAATTGACAA TCCACTGTGGAATCAATCAAGCTAGAAAGGGCCGGCCCAACACTAAGTGTGGCCTAAAGCAAAGTTTAAAGTGAGGCCAT ATTACATAAATGAGGACTATAGAAAACTTTAATTTTGGAGGCCTTTTTTACTTAGTAAAAAAATATTTTGAGGCCGTTTT TACTTAGTAAAACAAAATTCTTTTTGGAGGCCTAAAACCCTTGCTTGGGTGGCTTTACCCTTGGGCCGGCCCTGGCTAGA AGTTTGTTGGCTTGGTGGTACACCAACGTTCGGGTTCAATACTTGGTGGAGTGGGGCCTTGAAGTTAACTTGCCTGAGCT AGCCATTCAACTCATGAAACATAAATTGTAATTCACAGCAAAGAAATGCCACGTACTTGTGGTCATAAATCACAACGATG TCAAGGTGCATGCACCATGGCTAATTGGCTATGCTTCAACCAAACTAAGTAGGACCTACAGCCAGTGAAAGACGTCACGT AAAATGAATAAAACAAACAAGTTACTCTCTGATCTTCAATGCATCCATATTCCATCCATCCCAATCCCATGAAAAGTCAA GCTGTCAGACTTTTGAACCCTTTAGATTTTCACTATCCGCAAGTTTCATATTTTTCCTACATAACATTTCTCATATGAAG TTCTACAATATTCCATCAGCAGCAGTCATTTTATGACAATTAAACCATTTTCATCAGAAAACTGGTTGTCTCCTTTGAAG TGGAGTATGACTGATCAAACACTTATTCTTATTTTAAGTTATATTGCATGATTTTCCTGATTTTTCTTCAAATAACATAT TGCAATCCATAGGATTA
CDS sequence (LotjaGi1g1v0364300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGATTCAAAGAACCTCACAGTTTCCATGTTTAAGGAAATTGCTTCTTCGAGCTGGTTATCCCTCTTCTTCCTCCAA GATGGGGACTTACAACAGCTATGCATCTCAACCCTCCCCTCTTGAAATCCCAGACCAAAGTTACAGTGATGATGAATATG CCAATGTTGATTGGGACAACCTTGGATTTGGACTGATGCCAACTGATTACATGTACGTTGATAAATGCTACGCTGGTAAG AATTTTGTACGAGGACAACTCACTCGTTATGGAAACATTGAACTTAGCCCATCAGCTGGGGTCCTAAATTATGGTCAGGG ATTGTTTGAAGGCACGAAAGCATGCAGAAGCGAAAATGGGCGATTGCTGCTCTTCCGTCCAGAGGAAAATGCCATCCGCA TGAAGATTGGCGCCGAGAGAATGTGCATGCAATCCCCTTCAATCGATCAATTCGTCGATGCTCTCAAGCAAACTGCACTT GCAAACAAGCGTTGGATTCCTCCACCGGGTAAAGGATCATTGTATATGAGGCCTCTCCTCTTAGGAAGTGGTCCAGTTTT GGGTTTGGCTCCTGCACCTGAATACACTTTCCTTGTATATGCTTCCCCTGTTCGTAACTATTTCAAGGAGGGTTCCGCGC CGCTTAGCTTGTTCGTGGAGGAGGATTTTGACCGTGCTTCTCGCCGCGGCACCGGGAGTGTTAAAACCATTTCTAATTAT GCTCCGGTCTTAATGGCACAACTTAGAGCCAAGAACAGAGGATTTTCGGATGTGCTATACCTTGATTCAGAGACCAAGAA AAATCTGGAGGAGGTCTCTTCTTGTAACATTTTTATTGCCAAGGGCAAATGCATCTCAACACCTGCTACCAATGGAACCA TACTTGCCGGAATCACCAGAAAAAGTGTAATTGAAATTGCTGGTGATCTCGGCTATCAGGTGGAAGAGCATGCTGTAAAC GTGGATGAATTGATGGAGGCTGATGAAGTATTCTGCACAGGAACTGCTGTTGGTGTTGCCCCTGTAGGGAGTATCACATA CCAGGACAGAAGGGCGGAATATAAAACAGGTTCCGGAACCATTTGTCAAGAGTTGTACAAAACTATATCAGGAATTCAAA CGGGTACTATTGAAGATAAGAAGGGGTGGATTGTTGAAATTGATTAA
Protein sequence (LotjaGi1g1v0364300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMIQRTSQFPCLRKLLLRAGYPSSSSKMGTYNSYASQPSPLEIPDQSYSDDEYANVDWDNLGFGLMPTDYMYVDKCYAGK NFVRGQLTRYGNIELSPSAGVLNYGQGLFEGTKACRSENGRLLLFRPEENAIRMKIGAERMCMQSPSIDQFVDALKQTAL ANKRWIPPPGKGSLYMRPLLLGSGPVLGLAPAPEYTFLVYASPVRNYFKEGSAPLSLFVEEDFDRASRRGTGSVKTISNY APVLMAQLRAKNRGFSDVLYLDSETKKNLEEVSSCNIFIAKGKCISTPATNGTILAGITRKSVIEIAGDLGYQVEEHAVN VDELMEADEVFCTGTAVGVAPVGSITYQDRRAEYKTGSGTICQELYKTISGIQTGTIEDKKGWIVEID
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 22 | 388 | 367 | 3.0E-209 | – | |
PANTHER | 22 | 388 | 367 | 3.0E-209 | – | |
MobiDBLite | 23 | 42 | 20 | - | – | |
PIRSF | 38 | 388 | 351 | 9.6E-111 | ||
Gene3D | 39 | 215 | 177 | 7.1E-58 | ||
SUPERFAMILY | 48 | 384 | 337 | 1.1E-99 | ||
TIGRFAM | 84 | 387 | 304 | 1.5E-93 | ||
CDD | 94 | 375 | 282 | 6.34544E-120 | ||
Pfam | 107 | 345 | 239 | 2.3E-39 | ||
Gene3D | 216 | 388 | 173 | 9.9E-60 | ||
ProSitePatterns | 271 | 300 | 30 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
Molecular function | Branched-chain-amino-acid transaminase activity | Catalysis of the reaction: a branched-chain amino acid + 2-oxoglutarate = L-glutamate + a 2-oxocarboxylate derived from the branched-chain amino acid. | ||
Biological process | Branched-chain amino acid metabolic process | The chemical reactions and pathways involving amino acids containing a branched carbon skeleton, comprising isoleucine, leucine and valine. |
Expression pattern of LotjaGi1g1v0364300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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