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LotjaGi1g1v0368800.1

Overview

Field Value
Gene ID LotjaGi1g1v0368800
Transcript ID LotjaGi1g1v0368800.1
Lotus japonicus genome version Gifu v1.2
Description Protein phosphatase 2C family protein; TAIR: AT1G72770.1 HYPERSENSITIVE TO ABA1; Swiss-Prot: sp|Q9CAJ0|P2C16_ARATH Protein phosphatase 2C 16; TrEMBL-Plants: tr|K7KI89|K7KI89_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0368800
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:84726023..84730616) extracted from Lotus japonicus Gifu genome v1.2.

ACCCCATTGCTTTCTCTTTCCCTCAACAAAACAACAACACAACACACTTTCTCTTGCTCTTTTATTTTTTTTTTCTATAT TGCCCCTTTCTCTTTTCAAGCCAACAAAAGCTTCTTTTGTGTTGTTTTGGTCATTTTCTTCTTCTTCTTCTTCTCCACTG TCTTTCTCGCGCTTCCATCACCCACCCAGGTATGCATATGCATATAATCATATAATATTATGGACCAGAATAACTCAGCT CAGCTTTTTTTTTTCTCCTGCAATTTAATCGTTTGAATTAACCAAACTTCATATCTTTTTTCGATTGATTTTCATCTTCA ATCATGGGGTTTCAGGTGTAAGAAAAAATCATCAGAAACACAGTGAGAAGTGAAGAGAAGCAAGAAACTAGATTCTACAT GGTTCACAAAATTGGGTACTACTACTGAATCTGTTCTTGTCCCTTCTTTCATTCATTTTTGTAATTATTGTTGTTGCCTC AGATCCAGGCAACTTGTTGTGGTGTTATGTAGAAAAATGGGTATTGTCTTTTTTTGTGATTCTTGAGACTTTGCTTTTTC TGGGTTTTCTTTCTCATCAACTTTTTTTAATTTTCTCTTTTCTTTCATGTGTTTAGAGATAATGACTGTTGGTCTCTCTC TCTCTTGTGGGATTTAATGTTTCTTTTTTGTTTTCAGATGAAGTTTGTGTGTTTCAAGTTTCAAGCTGGTTCTCTCTCAC TGGAGTTAACATATATAGACAGAGAAGGGTGTGATGTGTATATGTGATAATAGTGCTTAGAAAGGGTGTTGCTTAGCTGT TTTTGGTTGAATTGTCCACGAATCGAAGTTCGAATCCATTTTGGTTGACCAGATCTGACTACCCATTTCACTTTCACTAC TTTTTAGCTAGTTCATGCTTTGGACATGTAGAATTTGTCTCCTCCTTAGGCCTTACTGGGCTTGTTAGTCATGGATAGTG ATCTTTTGAATCCACGCCTCGCATTCTGGGATCGTTTTCAATCGGTGAAGCAGGGGATAAATTAGTTAACACATGACAGA CTGTGTGGTGGTATCTGAAGGGTGGGAGGGTAACTTTCTGTGCTGCCTAGATAAGGGTTTTGATGGAGTAGATGTCGACC ACGGTGGCATTTCCATCAGGAGTAGGTAATTCAGTGTGTGATAAGCAAACTTACATGGATGTATCCAGAATTAAGCTGAT GGCAGATTCAGGATTGTTATCCATTTCTACTGAGACTTCTATAAGTTCTGATGAAGTTCATAATGGTAGCTATGAGGATG AAATTGGTATTGGTATTACAGCAATAACACCCTCAAAACAGGGAAGTGAAGGAGAAATTCCATTGTTGAATTTGATATCT CGAAACATAAGCACTTCTGTTGTTGGTGATGAAGTTTTAAATCCAGAAATTGAGGAGGAGGAGGATTCGATGTCATTGGA GGGTGATCCAAACCTTGATATCTCTCCTCGTTCAGTTGCGAGTGAGAACAGTAGTATTTTTGGAGATGAGTTAATTAGTT CTGAGATTACTTCAGATTTTGGGATAAGGAATTCCATAGACGCAGAGAAGAGCATCTCTGCTGTAAGAATTATTGCTATG GCTGCTGATTTGGACAAGTCAAATGTGGAGGCAGATATTATTATGAGTGAACCCCTTGCTGTGGCAGTGAGCCTCGAAGA AGAAACAGGAGTTAGATCTGCCCCGGTGCCTGCTACAGCTCTTCATCAACCACCTCTTGAAAAGGAGGTGTGTGGAACTG TTGGCCGTAGTGTTTTTGAATTGGATTGGACTCCACTTTGGGGATTTACAACTTTGTGTGGAAAAAGACCAGAGATGGAA GATGCAGTTGCTACTGTGCCTCGGTTTATGAAAATTCCTATTGAAATGCTAATTGGTGACAGGATATTTGATGGAATGAA CAAGTGTTTCCGTCAGCAGACAAGTCATTTCTATGGAGTCTATGATGGCCATGGTGGCTCTCAGGCAAAGTTTTATTTTG TTTTAAATGTGATTATTGTGTCTAATTGTTCGCATTTTTCTGTTCGTAACTCTTCACATTGAGCTTGCTTTCCTCATTCA GGTGGCAAATTTTTGTCGTGATCGTATGCATTTGGCTTTGGCTGAGGAAATAGAGCATGTCAAGGAAGGTCTATTAATTG GAAGTATCAATGATTGTCAAGATCAGTGGAAAAAGGCTTTCACCAATTGTTTTCTGAAGGTTGATGCTGAAGTTGGAGGG AAAATTAATAGTGAACCTGTTGCCCCAGAAACTGTTGGATCCACTGCTGTTGTTGCTGTTGTCTGTTCATCTCATATCAT AATTTCAAACTGTGGTGATTCAAGAGCAGTTCTATGTCGTGGCAAAGAACCCATAGCGTTATCTGCTGATCATAAAGTAA GTCACCTCCAATTACAGTTTTGCATCCCCTTTGAAAATAGGTTTTACTGATTAGAATCTGATGTCCGATTGTGAAATGGT AGCCTAATCGAGAAGATGAATATGCTAGAATTGAGGCAGCTGGAGGCAAGGTGATACAATGGAATGGTCATCGCGTATTT GGTGTTCTTGCAATGTCAAGGTCTATTGGTATGTACAAATTCCTAACTCACTTTATTTATGTTTTTGTGTTATCTTCTAG TTTGGGTTGAATGGAAATCTTTTGGTGGGTGGTTGATTACAAGGACTTTATTTTTAATGCACTTATTAGTATCTTAGTTA TGAATGGAGAAAGTGGATATTAGTTAAATGGTTTCGGCATGCCAATGGTTTATGTATGTACTCTGATATGAGAGCATATC GAGCAGTTTTATACTTAATTTTTGAAAGATATGTTATCAGAGGATTCTAGAGTTTAATTAAATATCTCTATCGTATCAGC ATTCAGGGCACATTTTTTTAACAAAAGAAAAGTTAGGATTTGAGTGACATGAAACGTGTAAAATTCTCCGGCCAAAATAT CTTGCAATTTCCGATGGTTCATCCTATAAAATTTCATTTAGGGTCTGTTTGGATGAGGGATAGTGTAGGGTAAAGGATGA AAAGTGAATAATTGTTGCTGTTTTGGAATTTCTAAATAAATAAAATAAAAATTTATATATATATATATATATATATATAT ATATATATATATCAAAAGAAAGGAAATGTGAAGGGTTGTTCCACCTCAACTGAGCCTTTTTGAGTTACCTAAATAGGTGC ATAATTAGTAATTTAGTATAATGAAATTGAGTTACCTTCCCCTTTCTTCCCTCAGCAGGGATTTTTTTTTCATCCTATCA TTGTACTTTTAAACCTAACGTAGCCTCAATTGTTGAAGATCTACTCCATAAACTGCGAATCTTAAAATTTTAAGTTCATC AATGCGGTATATTTGATTTTCTGTTGCAGCTAACCCTGAAGGTATTCAGGGGAGCAATTCAAATGAATATTTTGTGTTTA GCTATCTGATTGACCGGATTGCTTCTCTGTGTACTGTAGCTAGAATAGTAGAACAAGTTTTTGACCTTGAATAATGCCTG ATTATGGAAACTATGAATTGTTTTGCTTTGTTTTTTTATTAGGCACTTTGTTCTCCTCAAATTGTTTCTATTATACTATG ACTGTGACTTTCAGGTGATAGATATTTGAAGCCATGGATTATTCCTGATCCAGAAGTTACATTTCTTCCTCGTGCAAAAG ATGACGAATGTCTCATTCTTGCCAGTGATGGCCTGTGGGATGTCATGACAAATGAAGAGGCATGTGACCTAGCTCGGAGA CGCATACTTTTCTGGCACAAGAAAAATGGCTTGTCCATGTCCTCAGAAAGGGGAGAAGGAATTGATCCCGCTGCACAAGC AGCTGCGGAGTTCCTATCAAACCGTGCTCTTCTGAAAGGAAGCAAAGATAACATCACCGTGATTGTAGTTGATTTGAAAG CCCAGCGAAAATTTAAGAGTAAATCATAACTGTTTCCTTCAACTGCACAAAAGCTAGATGTGATCCAATATAGTTTTGCC CCTTAGTTTTCATCTGGGCATCTCCTAGCTTAAGCCTTCATCCCCTCTTTCCTTAGAACTCTCAACTGATTAAGTGTTTC CTTGTTCATTGCCGCATTTGGGGCTCTGTAAATCTTTGCTGCTTATTGTAGGTATAGGTTCATCAGTTCCCTTCTTTTGA ATCAGCATATTTGTATTCATTGTTATGCCTCCGAGAACAAAAGCTCTGTGAGGTATTTACTTCATACAGTTTTAGCATGT GTTGTTTATAGAAAAAAATGTAGTAGCTATTTGGCATTGTGGTTTCCAAATTGTGATTCATAGTCAGTATTTTCTATTAC ATCATTCCTTATTCAGAGCCTACTCTATTGTTGGATTGACATCATTGGCCATAACCTGATTCTTGTGGTTGTGCTACAAT AATAATGGTAGGGGATAACTATAGACAAGGCTGCTTAAGGAATAATGATGGTACTTATTGTGACTTTCCCACTGAATTCT GAGAGTAACTGCTTTATAAACAAGAATTTGATTCAGGAAAGAGTGATGAACTGTTGCATTCTTATTTCTATCTGGAGATT AATTTCAGATTTTTTCTTTACTAAGTTATGGGCT
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0368800.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTCGACCACGGTGGCATTTCCATCAGGAGTAGGTAATTCAGTGTGTGATAAGCAAACTTACATGGATGTATCCAGAAT TAAGCTGATGGCAGATTCAGGATTGTTATCCATTTCTACTGAGACTTCTATAAGTTCTGATGAAGTTCATAATGGTAGCT ATGAGGATGAAATTGGTATTGGTATTACAGCAATAACACCCTCAAAACAGGGAAGTGAAGGAGAAATTCCATTGTTGAAT TTGATATCTCGAAACATAAGCACTTCTGTTGTTGGTGATGAAGTTTTAAATCCAGAAATTGAGGAGGAGGAGGATTCGAT GTCATTGGAGGGTGATCCAAACCTTGATATCTCTCCTCGTTCAGTTGCGAGTGAGAACAGTAGTATTTTTGGAGATGAGT TAATTAGTTCTGAGATTACTTCAGATTTTGGGATAAGGAATTCCATAGACGCAGAGAAGAGCATCTCTGCTGTAAGAATT ATTGCTATGGCTGCTGATTTGGACAAGTCAAATGTGGAGGCAGATATTATTATGAGTGAACCCCTTGCTGTGGCAGTGAG CCTCGAAGAAGAAACAGGAGTTAGATCTGCCCCGGTGCCTGCTACAGCTCTTCATCAACCACCTCTTGAAAAGGAGGTGT GTGGAACTGTTGGCCGTAGTGTTTTTGAATTGGATTGGACTCCACTTTGGGGATTTACAACTTTGTGTGGAAAAAGACCA GAGATGGAAGATGCAGTTGCTACTGTGCCTCGGTTTATGAAAATTCCTATTGAAATGCTAATTGGTGACAGGATATTTGA TGGAATGAACAAGTGTTTCCGTCAGCAGACAAGTCATTTCTATGGAGTCTATGATGGCCATGGTGGCTCTCAGGTGGCAA ATTTTTGTCGTGATCGTATGCATTTGGCTTTGGCTGAGGAAATAGAGCATGTCAAGGAAGGTCTATTAATTGGAAGTATC AATGATTGTCAAGATCAGTGGAAAAAGGCTTTCACCAATTGTTTTCTGAAGGTTGATGCTGAAGTTGGAGGGAAAATTAA TAGTGAACCTGTTGCCCCAGAAACTGTTGGATCCACTGCTGTTGTTGCTGTTGTCTGTTCATCTCATATCATAATTTCAA ACTGTGGTGATTCAAGAGCAGTTCTATGTCGTGGCAAAGAACCCATAGCGTTATCTGCTGATCATAAACCTAATCGAGAA GATGAATATGCTAGAATTGAGGCAGCTGGAGGCAAGGTGATACAATGGAATGGTCATCGCGTATTTGGTGTTCTTGCAAT GTCAAGGTCTATTGGTGATAGATATTTGAAGCCATGGATTATTCCTGATCCAGAAGTTACATTTCTTCCTCGTGCAAAAG ATGACGAATGTCTCATTCTTGCCAGTGATGGCCTGTGGGATGTCATGACAAATGAAGAGGCATGTGACCTAGCTCGGAGA CGCATACTTTTCTGGCACAAGAAAAATGGCTTGTCCATGTCCTCAGAAAGGGGAGAAGGAATTGATCCCGCTGCACAAGC AGCTGCGGAGTTCCTATCAAACCGTGCTCTTCTGAAAGGAAGCAAAGATAACATCACCGTGATTGTAGTTGATTTGAAAG CCCAGCGAAAATTTAAGAGTAAATCATAA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0368800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MSTTVAFPSGVGNSVCDKQTYMDVSRIKLMADSGLLSISTETSISSDEVHNGSYEDEIGIGITAITPSKQGSEGEIPLLN LISRNISTSVVGDEVLNPEIEEEEDSMSLEGDPNLDISPRSVASENSSIFGDELISSEITSDFGIRNSIDAEKSISAVRI IAMAADLDKSNVEADIIMSEPLAVAVSLEEETGVRSAPVPATALHQPPLEKEVCGTVGRSVFELDWTPLWGFTTLCGKRP EMEDAVATVPRFMKIPIEMLIGDRIFDGMNKCFRQQTSHFYGVYDGHGGSQVANFCRDRMHLALAEEIEHVKEGLLIGSI NDCQDQWKKAFTNCFLKVDAEVGGKINSEPVAPETVGSTAVVAVVCSSHIIISNCGDSRAVLCRGKEPIALSADHKPNRE DEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPDPEVTFLPRAKDDECLILASDGLWDVMTNEEACDLARR RILFWHKKNGLSMSSERGEGIDPAAQAAAEFLSNRALLKGSKDNITVIVVDLKAQRKFKSKS
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR13832:SF652
144 540 397 2.1E-173 –
PANTHER
PTHR13832
144 540 397 2.1E-173
IPR015655
Gene3D
G3DSA:3.60.40.10
216 542 327 3.0E-108
IPR036457
SMART
SM00332
219 530 312 2.3E-94
IPR001932
SUPERFAMILY
SSF81606
221 533 313 9.68E-74
IPR036457
ProSiteProfiles
PS51746
229 532 304 52.216
IPR001932
CDD
cd00143
231 532 302 1.87848E-89
IPR001932
Pfam
PF00481
266 525 260 1.8E-65
IPR001932
ProSitePatterns
PS01032
280 288 9 -
IPR000222

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0004722
Molecular function Protein serine/threonine phosphatase activity Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate.
Subterm of
GO:0006470
Biological process Protein dephosphorylation The process of removing one or more phosphoric residues from a protein.
Subterm of
GO:0043169
Molecular function Cation binding Interacting selectively and non-covalently with cations, charged atoms or groups of atoms with a net positive charge.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0368800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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