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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0376000 |
| Transcript ID | LotjaGi1g1v0376000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Major facilitator superfamily protein; TAIR: AT5G25050.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q5FV41|FBT2_ARATH Probable folate-biopterin transporter 2; TrEMBL-Plants: tr|A0A1J7HQ91|A0A1J7HQ91_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0376000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:85446484..85450215) extracted from Lotus japonicus Gifu genome v1.2.
CCTCGTTTCTGGCACAGCCATTAATTTAAGGATAGTGGGAACAAGATCTTGTTCACGGTCCCATCCATATGTGCACCCTA TGGCGTAATTATCCTTCTTTAAAACATATAAATATATTGTCTTTTTCTTAAATAAAAAGAAGCTAAACATGATCTTTTAC ACTGCTTTAACAGCACGTAAAAAAAAAGTACTGTAATAACAGAAAAAACAATGGGAAAAAAGATATTTTTCATTTAATTG GGTAGACCTTGGAAAAATCAAAATACTCATTCGTCATGTGAAAAGGTTAGGGGCGTTGAATTTGATTTACCCTTTATAGT GACCATGTTGATTGTTGCTCTAACTTTCTATATGCAGCCGCAGTGATAGCTAGATTCCTTGTAGGTTTATATGATCAGAC TCAAAATCATCATCTGCATCACCTTCCATAGTTGATCACCAACTACAACAATGTCCAAGTCAACGTTATTCCTTCTCAAA ACCCCCCCTTCTTTTTGTGGGGTATAGTTATAGATAGAACATTGAAATCATAAGGAACTGAGTCCAAATCTGAAAGCTTC CTATGTTTAAGCTAGAGTTTTTTAGGTAGGATTTACTTTCAGCTAATTGCTGAATTTGGTCCTACTCTTTGCTGCTTCAG TCTTCATCACAAGATTGAGTGATGCAGGAAGATGAGGAAAATCTGAAGGATTCCTCTGATGGAGTTGTGGAGCAAAAATA TGAAACCAGAAAGGGGGGTTGTGGAGGGTGTCTCTGCATTCCCCTGCACTGGTTCAGAATGCTTTCAAGGGAAACGCATT GGAGCTTTGTGCTTGGGGTGATACTTGTTTATGGTGTGAGTCAGGGACTTGGTGGAGCTTTTTCTGGCGTTGCCACCAAA TATTACATGAAAGATGTTCAAAAAGTGCAGCCATCAGAAGCACAAGTTTATGGAGGAATCACATACATTCCTTGGATTGT TAAGCCTCTCTGGGGGCTTCTCACTGATGTTCTCCCAATTTTTGGATATCGCCGGCGTCCTTATTTCGTTTTTGCTGGTA TGTGCCTGCAGCTTCTGTAGCTTTTTCTTTTGATCTGCCAAGTTGAATTACATTACAAATTCAACTCAATTTGCATTTTA TGTGGGACTTTTAAATTATTTGTTCAGTTGGTGAATTGGTGGTAAACTGGTGATCATGATAATTACATTGCAATCTTAAT TGTTGAAGTTTTAGTCAACAACCATTTATTGCATGTTCGGATCAACATCTCTTTGATCAGAATCAATTCTGGTACTCAGA AACTACTCATAAAAGCTTCTCCCAAGAATTGATTTTAGCTTTAAAATCAAATGTAGAAAGATTTCCAATTATGCACTTAC TTCTGTTCTGTTGCTTTTGATTTTTACATTTTGGCATAACAAAATGTATATCTGAAAGCTGGAAAGTATGAGATTATCGC TTAATTGGGTTACTATCTTTGAACTTCCTAAGACATCTTCGAACATTGGTCAATGGTCTTTGACTCGGTGCTTATTTGGA TACATGTTAGATTTTCAAGTCAGAAGGATAGTTGATTCTGGGAGAAGCTACTCCTAAAAGCTTTTGTGGGAGCAGAATTA ATTCAGGAGAATTTGAAGTTTTGAACGTGAGTCGAAACATGCTATCAATGTGCTTGATATATGGAGCTAAAAGTTTACTT TTACTACTACAAAAAAATGTATAAAACATGAGAACAACTAAGCGTTTCAAACAATTTTAGATGTTTTAAAAATTATATTT TCACTATATCAGTTTCTTATTTTTAATTAACATTGTCCTTCCTTACCAATGTATGCTACATGAAAGGATTCCTTAAGGGC TGTTGGAGAGTTTCAGAGTTTGCTTCATTAACATGTGGCCTAACTTTTGGCCCCTTTGGTTGTGACAGGTTTCTTGGGAG TGTTTGGCATGCTTATGTTATCTTTGCACGAGAATCTGCATCTTGCGTTGGCCCTTCTATCATTAACGGCTGGGAGTGCC GGTGTCGCTATAGCTGACGTTACCATTGATGCCTGCGTGGCACAGAATAGTATCTCTCATCCTTCACTAGCTGCTGACAT GCAAAGTTTATGTGCCTTCAGTAGTTCAGTTGGAGCATTATTAGGATTCTTCTTTAGTGGTATCTTTGTCCACCTTATAG GACCTATGGTTAGCCTCATTTTCATAAAAAAATTCAATTTTTTTCTTGTCTTTTATGCACTTTGTAATGCTAATAGGAGA GCTTTTCCTCAGGGGGTGTTTGGTTTGATGACAATCCCAGCCGGACTTGTAATTTTGGTTGGTTTTCTGCTTGATGAGCC CCATATACCTAACTTTGCTTACAAACAGGTATAATTAACTTGTGTCATTCATTTCCATGATCCTGACTAATACTTGCGTA ATCTGATATTCCATGTTATGTACCTATCTATGTCTAGGTGAACCAAAAGTTTCTGGATGCGACCAAGGCTATGTGGACGA CATTGAAGAGCGAAGATGTTTGGAGGCCTTGTTTATACATGTATTTATCCCTTGCATTGAGTTTGAATATTCTTGAAGGA ATGTTCTATTGGTATACAGACTCAAAAGCTGGACCATCTTTCTCTCAGGTATTTGGATAGGAATACTGATTGATTATCAT ATTTTAAAGGGGGATTTATAGCATGTTTGCAAATTATTCTGCAATTAATTTTAAAGCCAGGATCAGTTATAGGGAGAAGT TTCTGCGAGTAGATTCTATTGATTGGGAGGAAAATTAAGCTGATCTAAACATGCTATTTGTGTAACGTGGCTGTGGAGTC TTGTGATCCCTTCCTCTTAGGGAAAAGATGGTGAAGAATGCTAGTGAGAAAGTAGCCTTTTCCCCCCTTTTTCTTTCATA AGCAATCAGTAACCCTTCTAGTTCTTCTCTCTTACGCAGGAGACTGTTGGTTTTATATTTTCGATTGGTTCGGTTGGCTC GCTTTTTGGCGCAATACTATACCATTATGCTTTAAAGGATTATGCATTCAGAGACTTGCTCTTCTGGACTCAATTACTAT ACAGTTTGTCAGGCATGCTAGATTTGATTATGGTTGTGCGATTGAACCTTAAGTTCGGCGTACCAGATTATGTCTTTGTT GTGGTCGTTGAAAGTGTAGCTCAAATGACTATTAGGCTCAAGTGGATGCCATTGCTTGTGCTCAGTTCAAAGCTTTGTCC CTCAGGTATTGAAGGCACTTTCTTTGCACTACTAATGTCAATTGATAATATTGGACTTCTCTCAGCATCATGGGGAGGAG GCTTTTTGCTCCATATACTAAAGATTTCACGAACGCAGTTTGATAATCTTTGGTTCGCTATTTTGATACGGAATATTCTG AGAATCACTCCACTTTGCCTGCTGTTTTTGGTGCCTAGAGCTGATCCAAACTCTTCTATTCTTACAAGCGAATGCTTGAG TTCACAAGTGTGTATTGAGACTTCAGAAACTCAGAATATTGAATTGGTTTCCCTTGTAAACAATGTTGATGGTAGCTAGA TTTTTCAATTTTAAATACACAAAAAGTAACTAGCCAATGTTGATGGCAAGAAATTGAGGAAAGTTTCAAAGGCCTCTGAA CTCTGATGTACTATTGTTGAGTTTACATTCTTCTTTTTCAGTCATGTTTCATATTACTCCCTCCGGTCCTATTTATAAGC AACAAAAAAAAAAATTCACATAGTTTAAGAAATGTAGTTAAACTAGATAAAA
CDS sequence (LotjaGi1g1v0376000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGGAAGATGAGGAAAATCTGAAGGATTCCTCTGATGGAGTTGTGGAGCAAAAATATGAAACCAGAAAGGGGGGTTG TGGAGGGTGTCTCTGCATTCCCCTGCACTGGTTCAGAATGCTTTCAAGGGAAACGCATTGGAGCTTTGTGCTTGGGGTGA TACTTGTTTATGGTGTGAGTCAGGGACTTGGTGGAGCTTTTTCTGGCGTTGCCACCAAATATTACATGAAAGATGTTCAA AAAGTGCAGCCATCAGAAGCACAAGTTTATGGAGGAATCACATACATTCCTTGGATTGTTAAGCCTCTCTGGGGGCTTCT CACTGATGTTCTCCCAATTTTTGGATATCGCCGGCGTCCTTATTTCGTTTTTGCTGGTTTCTTGGGAGTGTTTGGCATGC TTATGTTATCTTTGCACGAGAATCTGCATCTTGCGTTGGCCCTTCTATCATTAACGGCTGGGAGTGCCGGTGTCGCTATA GCTGACGTTACCATTGATGCCTGCGTGGCACAGAATAGTATCTCTCATCCTTCACTAGCTGCTGACATGCAAAGTTTATG TGCCTTCAGTAGTTCAGTTGGAGCATTATTAGGATTCTTCTTTAGTGGTATCTTTGTCCACCTTATAGGACCTATGGGGG TGTTTGGTTTGATGACAATCCCAGCCGGACTTGTAATTTTGGTTGGTTTTCTGCTTGATGAGCCCCATATACCTAACTTT GCTTACAAACAGGTGAACCAAAAGTTTCTGGATGCGACCAAGGCTATGTGGACGACATTGAAGAGCGAAGATGTTTGGAG GCCTTGTTTATACATGTATTTATCCCTTGCATTGAGTTTGAATATTCTTGAAGGAATGTTCTATTGGTATACAGACTCAA AAGCTGGACCATCTTTCTCTCAGGAGACTGTTGGTTTTATATTTTCGATTGGTTCGGTTGGCTCGCTTTTTGGCGCAATA CTATACCATTATGCTTTAAAGGATTATGCATTCAGAGACTTGCTCTTCTGGACTCAATTACTATACAGTTTGTCAGGCAT GCTAGATTTGATTATGGTTGTGCGATTGAACCTTAAGTTCGGCGTACCAGATTATGTCTTTGTTGTGGTCGTTGAAAGTG TAGCTCAAATGACTATTAGGCTCAAGTGGATGCCATTGCTTGTGCTCAGTTCAAAGCTTTGTCCCTCAGGTATTGAAGGC ACTTTCTTTGCACTACTAATGTCAATTGATAATATTGGACTTCTCTCAGCATCATGGGGAGGAGGCTTTTTGCTCCATAT ACTAAAGATTTCACGAACGCAGTTTGATAATCTTTGGTTCGCTATTTTGATACGGAATATTCTGAGAATCACTCCACTTT GCCTGCTGTTTTTGGTGCCTAGAGCTGATCCAAACTCTTCTATTCTTACAAGCGAATGCTTGAGTTCACAAGTGTGTATT GAGACTTCAGAAACTCAGAATATTGAATTGGTTTCCCTTGTAAACAATGTTGATGGTAGCTAG
Protein sequence (LotjaGi1g1v0376000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQEDEENLKDSSDGVVEQKYETRKGGCGGCLCIPLHWFRMLSRETHWSFVLGVILVYGVSQGLGGAFSGVATKYYMKDVQ KVQPSEAQVYGGITYIPWIVKPLWGLLTDVLPIFGYRRRPYFVFAGFLGVFGMLMLSLHENLHLALALLSLTAGSAGVAI ADVTIDACVAQNSISHPSLAADMQSLCAFSSSVGALLGFFFSGIFVHLIGPMGVFGLMTIPAGLVILVGFLLDEPHIPNF AYKQVNQKFLDATKAMWTTLKSEDVWRPCLYMYLSLALSLNILEGMFYWYTDSKAGPSFSQETVGFIFSIGSVGSLFGAI LYHYALKDYAFRDLLFWTQLLYSLSGMLDLIMVVRLNLKFGVPDYVFVVVVESVAQMTIRLKWMPLLVLSSKLCPSGIEG TFFALLMSIDNIGLLSASWGGGFLLHILKISRTQFDNLWFAILIRNILRITPLCLLFLVPRADPNSSILTSECLSSQVCI ETSETQNIELVSLVNNVDGS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 48 | 48 | - | – | |
| PANTHER | 14 | 497 | 484 | 8.8E-265 | ||
| PANTHER | 14 | 497 | 484 | 8.8E-265 | – | |
| SUPERFAMILY | 47 | 459 | 413 | 2.49E-24 | ||
| TMHMM | 49 | 71 | 23 | - | – | |
| Phobius | 49 | 75 | 27 | - | – | |
| Gene3D | 50 | 445 | 396 | 4.2E-22 | – | |
| CDD | 52 | 457 | 406 | 1.77738E-143 | – | |
| Pfam | 61 | 228 | 168 | 3.9E-38 | ||
| Phobius | 76 | 94 | 19 | - | – | |
| TMHMM | 86 | 108 | 23 | - | – | |
| Phobius | 95 | 114 | 20 | - | – | |
| Phobius | 115 | 120 | 6 | - | – | |
| TMHMM | 121 | 138 | 18 | - | – | |
| Phobius | 121 | 138 | 18 | - | – | |
| Phobius | 139 | 143 | 5 | - | – | |
| Phobius | 144 | 165 | 22 | - | – | |
| Phobius | 166 | 185 | 20 | - | – | |
| Phobius | 186 | 206 | 21 | - | – | |
| TMHMM | 186 | 208 | 23 | - | – | |
| Phobius | 207 | 211 | 5 | - | – | |
| Phobius | 212 | 232 | 21 | - | – | |
| TMHMM | 213 | 232 | 20 | - | – | |
| Phobius | 233 | 269 | 37 | - | – | |
| TMHMM | 269 | 291 | 23 | - | – | |
| Phobius | 270 | 291 | 22 | - | – | |
| Pfam | 276 | 463 | 188 | 4.4E-53 | ||
| Phobius | 292 | 302 | 11 | - | – | |
| Phobius | 303 | 322 | 20 | - | – | |
| TMHMM | 304 | 326 | 23 | - | – | |
| Phobius | 323 | 333 | 11 | - | – | |
| Phobius | 334 | 356 | 23 | - | – | |
| TMHMM | 336 | 358 | 23 | - | – | |
| Phobius | 357 | 361 | 5 | - | – | |
| Phobius | 362 | 381 | 20 | - | – | |
| TMHMM | 365 | 387 | 23 | - | – | |
| Phobius | 382 | 401 | 20 | - | – | |
| TMHMM | 402 | 424 | 23 | - | – | |
| Phobius | 402 | 426 | 25 | - | – | |
| Phobius | 427 | 437 | 11 | - | – | |
| TMHMM | 437 | 459 | 23 | - | – | |
| Phobius | 438 | 459 | 22 | - | – | |
| Phobius | 460 | 500 | 41 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0376000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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