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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0377200 |
| Transcript ID | LotjaGi1g1v0377200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Early nodulin-like protein; TAIR: AT2G25060.1 early nodulin-like protein 14; Swiss-Prot: sp|Q9SK27|ENL1_ARATH Early nodulin-like protein 1; TrEMBL-Plants: tr|I3T466|I3T466_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0377200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:85676808..85677881) extracted from Lotus japonicus Gifu genome v1.2.
CACCATTAATGAAACCCAGGGACTACTATGACCGACGCTTACAATCTCAGGGACCAAAATGGTGATTCACTCATTTTCTA CCCGTTATTTAACGTTACAATGCCACAACAACCGACACAGAACCCAAAATTCAGCAACCTCTCCCCACAGTCTTCGAAGT CCCAACGGCTAGTTTCTCCCATCTTTATCACCATAAATACAGTCTTCCAAATTCCTAACACCCCACTAGTGAAAACCTTG CACCACACCATTTTACACACACCATTTCAGCTATCAGAAAAAACCATGGCTGGTTCCTCTGCTTCTCTTTTGCTCCTATT CCTTCTCTTTGGCTTCTCTGCAGCTAAGGAACTCTTAGTTGGTGGCAAGACAGATGCATGGAAGGTTCCATCTTCTGAAG CAGATTCCCTCAATCAATGGGCTGAAAAGTCTCGCTTCAAAGTCGGAGACTATCTTGGTAACTATATAACTTCCCAACAT GGCAACATTCAATTCCATAATTCAACTCATTTTTGTTACCTTAATTTCCATCACTGAAACTTCTTTTTATGTTTCTTGTT TGATTGACACAGTGTGGAAATATGATGGTGGGAAAGACTCTGTGTTGCAAGTAAACAAGGAGGACTATGGTAGTTGCAAC ACCTCCAACCCCATTGAAGAGTACAAAGATGGGAACACTAAGGTGAAGCTTGACCGTCCTGGACCTCACTACTTCATCAG TGGAGCAAAGGGTCACTGTGAGAAGGGGCAGAAGTTGGTTGTGGTGGTTATGACTCCAAAGCACAGCAGAGACAGAGCAA TTTCCCCTGCATCTTCTCCAGCAGAGTTGGAAGAAGGTCCTGCTGTTGCTCCTACTAGCAGTGCTACAGTTTTGCAGAGT GGCTTTGTGGCGGTTCTGGGAGTGTTGGCTATGTACGTGATGTGAGATTAGATTACTGTGAGCAAAATGTAAATCACAGT GAGGTTATTGTGATTTCTGAGTAGTTTTATGATTATTATTAATTATTCTTTATTCAAAAACTTTGTAAACCTTTGATATC AGATTCGTGTTTTATGCGAAGGTATAAGAAGATA
CDS sequence (LotjaGi1g1v0377200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACCGACGCTTACAATCTCAGGGACCAAAATGGTGATTCACTCATTTTCTACCCGTTATTTAACGTTACAATGCCACA ACAACCGACACAGAACCCAAAATTCAGCAACCTCTCCCCACAGTCTTCGAAGTCCCAACGGCTAGTTTCTCCCATCTTTA TCACCATAAATACAGTCTTCCAAATTCCTAACACCCCACTAGTGAAAACCTTGCACCACACCATTTTACACACACCATTT CAGCTATCAGAAAAAACCATGGCTGGTTCCTCTGCTTCTCTTTTGCTCCTATTCCTTCTCTTTGGCTTCTCTGCAGCTAA GGAACTCTTAGTTGGTGGCAAGACAGATGCATGGAAGGTTCCATCTTCTGAAGCAGATTCCCTCAATCAATGGGCTGAAA AGTCTCGCTTCAAAGTCGGAGACTATCTTGTGTGGAAATATGATGGTGGGAAAGACTCTGTGTTGCAAGTAAACAAGGAG GACTATGGTAGTTGCAACACCTCCAACCCCATTGAAGAGTACAAAGATGGGAACACTAAGGTGAAGCTTGACCGTCCTGG ACCTCACTACTTCATCAGTGGAGCAAAGGGTCACTGTGAGAAGGGGCAGAAGTTGGTTGTGGTGGTTATGACTCCAAAGC ACAGCAGAGACAGAGCAATTTCCCCTGCATCTTCTCCAGCAGAGTTGGAAGAAGGTCCTGCTGTTGCTCCTACTAGCAGT GCTACAGTTTTGCAGAGTGGCTTTGTGGCGGTTCTGGGAGTGTTGGCTATGTACGTGATGTGA
Protein sequence (LotjaGi1g1v0377200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTDAYNLRDQNGDSLIFYPLFNVTMPQQPTQNPKFSNLSPQSSKSQRLVSPIFITINTVFQIPNTPLVKTLHHTILHTPF QLSEKTMAGSSASLLLLFLLFGFSAAKELLVGGKTDAWKVPSSEADSLNQWAEKSRFKVGDYLVWKYDGGKDSVLQVNKE DYGSCNTSNPIEEYKDGNTKVKLDRPGPHYFISGAKGHCEKGQKLVVVVMTPKHSRDRAISPASSPAELEEGPAVAPTSS ATVLQSGFVAVLGVLAMYVM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 86 | 86 | - | – | |
| Phobius | 87 | 106 | 20 | - | – | |
| PANTHER | 91 | 244 | 154 | 1.9E-67 | ||
| PANTHER | 91 | 244 | 154 | 1.9E-67 | – | |
| SUPERFAMILY | 106 | 210 | 105 | 9.28E-34 | ||
| Phobius | 107 | 240 | 134 | - | – | |
| Gene3D | 107 | 223 | 117 | 5.8E-38 | ||
| ProSiteProfiles | 107 | 211 | 105 | 42.613 | ||
| CDD | 107 | 210 | 104 | 1.65947E-63 | ||
| Pfam | 118 | 203 | 86 | 1.8E-27 | ||
| Phobius | 241 | 259 | 19 | - | – | |
| Phobius | 260 | 260 | 1 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Electron transfer activity | Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient. |
Expression pattern of LotjaGi1g1v0377200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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