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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR039391
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We have found 43 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.674s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0052600.1
n.a. Blue copper protein; TAIR: AT1G08500.1 early nodulin-like protein 18; Swiss-Prot: sp|Q41001|BCP_PEA Blue copper protein; TrEMBL-Plants: tr|I3S4A4|I3S4A4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0052600 LjG1.1_chr1 7431714 7435716 -
2 domain predictions
1 GO term
LotjaGi1g1v0055700.1
n.a. Early nodulin-like protein; TAIR: AT2G27035.1 early nodulin-like protein 20; Swiss-Prot: sp|Q39131|LAML_ARATH Lamin-like protein; TrEMBL-Plants: tr|A0A151U1Q4|A0A151U1Q4_CAJCA Lamin-like protein; Found in the gene: LotjaGi1g1v0055700 LjG1.1_chr1 7841572 7843617 +
2 domain predictions
1 GO term
LotjaGi1g1v0340500.1
n.a. Blue copper protein; TAIR: AT1G72230.1 Cupredoxin superfamily protein; Swiss-Prot: sp|Q41001|BCP_PEA Blue copper protein; TrEMBL-Plants: tr|I3SFL9|I3SFL9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0340500 LjG1.1_chr1 80243047 80244823 -
2 domain predictions
1 GO term
LotjaGi1g1v0377200.1
n.a. Early nodulin-like protein; TAIR: AT2G25060.1 early nodulin-like protein 14; Swiss-Prot: sp|Q9SK27|ENL1_ARATH Early nodulin-like protein 1; TrEMBL-Plants: tr|I3T466|I3T466_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0377200 LjG1.1_chr1 85676808 85677881 -
2 domain predictions
1 GO term
LotjaGi1g1v0465500.1
n.a. Early nodulin-like protein; TAIR: AT1G08500.1 early nodulin-like protein 18; Swiss-Prot: sp|Q39131|LAML_ARATH Lamin-like protein; TrEMBL-Plants: tr|V7B314|V7B314_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0465500 LjG1.1_chr1 97351229 97352777 +
2 domain predictions
1 GO term
LotjaGi1g1v0623100.1
n.a. Blue copper protein; TAIR: AT3G27200.1 Cupredoxin superfamily protein; Swiss-Prot: sp|O82081|UCC1_ARATH Uclacyanin 1; TrEMBL-Plants: tr|I3T2G3|I3T2G3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0623100 LjG1.1_chr1 117022946 117024152 -
2 domain predictions
1 GO term
LotjaGi1g1v0645800.1
n.a. Blue copper protein; TAIR: AT3G17675.1 Cupredoxin superfamily protein; Swiss-Prot: sp|O82081|UCC1_ARATH Uclacyanin 1; TrEMBL-Plants: tr|G7L0I0|G7L0I0_MEDTR Plastocyanin-like domain protein; Found in the gene: LotjaGi1g1v0645800 LjG1.1_chr1 120271598 120272812 -
2 domain predictions
1 GO term
LotjaGi1g1v0645900.1
n.a. Blue copper protein; TAIR: AT2G32300.1 uclacyanin 1; Swiss-Prot: sp|O82081|UCC1_ARATH Uclacyanin 1; TrEMBL-Plants: tr|G7L0H0|G7L0H0_MEDTR Plastocyanin-like domain protein; Found in the gene: LotjaGi1g1v0645900 LjG1.1_chr1 120287855 120288761 +
2 domain predictions
1 GO term
LotjaGi2g1v0087600.1
n.a. Blue copper protein; TAIR: AT3G27200.1 Cupredoxin superfamily protein; Swiss-Prot: sp|O82081|UCC1_ARATH Uclacyanin 1; TrEMBL-Plants: tr|C6SYZ1|C6SYZ1_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0087600 LjG1.1_chr2 25556079 25560129 +
2 domain predictions
1 GO term
LotjaGi2g1v0181700.1
n.a. Blue copper protein; TAIR: AT2G32300.1 uclacyanin 1; Swiss-Prot: sp|O82081|UCC1_ARATH Uclacyanin 1; TrEMBL-Plants: tr|A0A0L9VHP9|A0A0L9VHP9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0181700 LjG1.1_chr2 60347600 60349517 +
2 domain predictions
1 GO term
LotjaGi2g1v0262400.1
n.a. Early nodulin-like protein; TAIR: AT2G27035.1 early nodulin-like protein 20; Swiss-Prot: sp|Q39131|LAML_ARATH Lamin-like protein; TrEMBL-Plants: tr|G7KLC9|G7KLC9_MEDTR Plastocyanin-like domain protein; Found in the gene: LotjaGi2g1v0262400 LjG1.1_chr2 73135630 73138260 -
2 domain predictions
1 GO term
LotjaGi2g1v0262600.1
n.a. Early nodulin-like protein; TAIR: AT5G15350.1 early nodulin-like protein 17; Swiss-Prot: sp|Q39131|LAML_ARATH Lamin-like protein; TrEMBL-Plants: tr|I3S778|I3S778_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0262600 LjG1.1_chr2 73139752 73146201 -
2 domain predictions
1 GO term
LotjaGi3g1v0020300.1
n.a. Early nodulin-like protein; TAIR: AT1G79800.1 early nodulin-like protein 7; Swiss-Prot: sp|Q9SK27|ENL1_ARATH Early nodulin-like protein 1; TrEMBL-Plants: tr|K7M3S2|K7M3S2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0020300 LjG1.1_chr3 2087722 2088591 -
2 domain predictions
1 GO term
LotjaGi3g1v0036600.1
n.a. Blue copper protein; TAIR: AT3G17675.1 Cupredoxin superfamily protein; Swiss-Prot: sp|O82081|UCC1_ARATH Uclacyanin 1; TrEMBL-Plants: tr|G7L0I0|G7L0I0_MEDTR Plastocyanin-like domain protein; Found in the gene: LotjaGi3g1v0036600 LjG1.1_chr3 3979272 3980110 -
2 domain predictions
1 GO term
LotjaGi3g1v0046800.1
n.a. Early nodulin-like protein; TAIR: AT5G53870.1 early nodulin-like protein 1; Swiss-Prot: sp|Q9T076|ENL2_ARATH Early nodulin-like protein 2; TrEMBL-Plants: tr|A0A072TQN9|A0A072TQN9_MEDTR Plastocyanin-like domain protein; Found in the gene: LotjaGi3g1v0046800 LjG1.1_chr3 4986226 4988315 -
2 domain predictions
1 GO term
LotjaGi3g1v0068000.1
n.a. Blue copper protein; TAIR: AT2G32300.1 uclacyanin 1; Swiss-Prot: sp|O82081|UCC1_ARATH Uclacyanin 1; TrEMBL-Plants: tr|I3S2A6|I3S2A6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0068000 LjG1.1_chr3 7416931 7419151 +
2 domain predictions
1 GO term
LotjaGi3g1v0097500.1
n.a. Early nodulin-like protein; TAIR: AT4G28365.1 early nodulin-like protein 3; Swiss-Prot: sp|Q9T076|ENL2_ARATH Early nodulin-like protein 2; TrEMBL-Plants: tr|I3SQD6|I3SQD6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0097500 LjG1.1_chr3 12157246 12158614 +
2 domain predictions
1 GO term
LotjaGi3g1v0149300.1
n.a. Early nodulin-like protein; TAIR: AT3G20570.1 early nodulin-like protein 9; Swiss-Prot: sp|Q9SK27|ENL1_ARATH Early nodulin-like protein 1; TrEMBL-Plants: tr|I3S731|I3S731_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0149300 LjG1.1_chr3 20126988 20137643 -
2 domain predictions
1 GO term
LotjaGi3g1v0153700_LC.1
n.a. Early nodulin-like protein; TAIR: AT5G53870.2 early nodulin-like protein 1; Swiss-Prot: sp|Q9T076|ENL2_ARATH Early nodulin-like protein 2; TrEMBL-Plants: tr|A0A1J7I9P4|A0A1J7I9P4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0153700_LC LjG1.1_chr3 20831550 20834850 -
2 domain predictions
1 GO term
LotjaGi3g1v0192300.1
n.a. Blue copper protein; TAIR: AT2G32300.1 uclacyanin 1; Swiss-Prot: sp|O82081|UCC1_ARATH Uclacyanin 1; TrEMBL-Plants: tr|A0A151QU90|A0A151QU90_CAJCA Blue copper protein; Found in the gene: LotjaGi3g1v0192300 LjG1.1_chr3 27783670 27789111 +
2 domain predictions
1 GO term
LotjaGi3g1v0237700.1
n.a. Early nodulin-like protein; TAIR: AT3G20570.1 early nodulin-like protein 9; Swiss-Prot: sp|Q8LC95|ENL3_ARATH Early nodulin-like protein 3; TrEMBL-Plants: tr|I3T3A3|I3T3A3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0237700 LjG1.1_chr3 38196594 38199520 +
2 domain predictions
1 GO term
LotjaGi3g1v0348000.1
n.a. Blue copper-like protein; TAIR: AT5G15350.1 early nodulin-like protein 17; Swiss-Prot: sp|Q39131|LAML_ARATH Lamin-like protein; TrEMBL-Plants: tr|I3S4H8|I3S4H8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0348000 LjG1.1_chr3 72543071 72544502 +
2 domain predictions
1 GO term
LotjaGi3g1v0367400.1
n.a. Basic blue protein; TAIR: AT2G02850.1 plantacyanin; Swiss-Prot: sp|Q8LG89|BABL_ARATH Basic blue protein; TrEMBL-Plants: tr|I3SU85|I3SU85_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0367400 LjG1.1_chr3 75350287 75351309 -
2 domain predictions
1 GO term
LotjaGi3g1v0367500.1
n.a. Basic blue protein; TAIR: AT2G02850.1 plantacyanin; Swiss-Prot: sp|Q8LG89|BABL_ARATH Basic blue protein; TrEMBL-Plants: tr|I3SJ85|I3SJ85_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0367500 LjG1.1_chr3 75356205 75357040 -
2 domain predictions
1 GO term
LotjaGi3g1v0445600.1
n.a. Early nodulin-like protein; TAIR: AT4G28365.1 early nodulin-like protein 3; Swiss-Prot: sp|Q9T076|ENL2_ARATH Early nodulin-like protein 2; TrEMBL-Plants: tr|W9RA80|W9RA80_9ROSA Early nodulin-like protein 1; Found in the gene: LotjaGi3g1v0445600 LjG1.1_chr3 85891022 85892742 -
2 domain predictions
1 GO term
LotjaGi3g1v0452800.1
n.a. Early nodulin-like protein; TAIR: AT4G28365.1 early nodulin-like protein 3; Swiss-Prot: sp|Q9T076|ENL2_ARATH Early nodulin-like protein 2; TrEMBL-Plants: tr|I3SQD6|I3SQD6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0452800 LjG1.1_chr3 86623781 86624982 +
2 domain predictions
1 GO term
LotjaGi4g1v0201700_LC.1
n.a. Early nodulin-like protein; TAIR: AT4G27520.1 early nodulin-like protein 2; Swiss-Prot: sp|Q9T076|ENL2_ARATH Early nodulin-like protein 2; TrEMBL-Plants: tr|I3SQD6|I3SQD6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0201700_LC LjG1.1_chr4 46740408 46742383 +
2 domain predictions
1 GO term
LotjaGi4g1v0272800.1
n.a. Blue copper protein; TAIR: AT5G20230.1 blue-copper-binding protein; Swiss-Prot: sp|Q41001|BCP_PEA Blue copper protein; TrEMBL-Plants: tr|I3RZH2|I3RZH2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0272800 LjG1.1_chr4 64068147 64069679 +
2 domain predictions
1 GO term
LotjaGi4g1v0272900.1
n.a. Blue copper protein; TAIR: AT2G26720.1 Cupredoxin superfamily protein; Swiss-Prot: sp|Q41001|BCP_PEA Blue copper protein; TrEMBL-Plants: tr|I3RZH2|I3RZH2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0272900 LjG1.1_chr4 64128941 64130712 -
2 domain predictions
1 GO term
LotjaGi4g1v0273100.1
n.a. Blue copper protein; TAIR: AT2G26720.1 Cupredoxin superfamily protein; Swiss-Prot: sp|Q41001|BCP_PEA Blue copper protein; TrEMBL-Plants: tr|I3RZH2|I3RZH2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0273100 LjG1.1_chr4 64207540 64209246 +
2 domain predictions
1 GO term
LotjaGi4g1v0273200.1
n.a. Blue copper protein; TAIR: AT2G32300.1 uclacyanin 1; Swiss-Prot: sp|Q41001|BCP_PEA Blue copper protein; TrEMBL-Plants: tr|I3RZH2|I3RZH2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0273200 LjG1.1_chr4 64217241 64218601 +
2 domain predictions
1 GO term
LotjaGi4g1v0273300.1
n.a. Blue copper protein; TAIR: AT5G20230.1 blue-copper-binding protein; Swiss-Prot: sp|Q07488|BCB1_ARATH Blue copper protein; TrEMBL-Plants: tr|A0A0L9TRH6|A0A0L9TRH6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0273300 LjG1.1_chr4 64240412 64243245 +
2 domain predictions
1 GO term
LotjaGi4g1v0288300.1
n.a. Early nodulin-like protein; TAIR: AT2G25060.1 early nodulin-like protein 14; Swiss-Prot: sp|P93328|NO16_MEDTR Early nodulin-16; TrEMBL-Plants: tr|I3S314|I3S314_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0288300 LjG1.1_chr4 66059579 66062771 -
2 domain predictions
1 GO term
LotjaGi4g1v0389200.1
n.a. Basic blue protein; TAIR: AT2G02850.1 plantacyanin; Swiss-Prot: sp|Q8LG89|BABL_ARATH Basic blue protein; TrEMBL-Plants: tr|I3S7Z7|I3S7Z7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0389200 LjG1.1_chr4 76751685 76753497 -
2 domain predictions
1 GO term
LotjaGi4g1v0389300.1
n.a. Basic blue-like protein; TAIR: AT2G02850.1 plantacyanin; Swiss-Prot: sp|Q8LG89|BABL_ARATH Basic blue protein; TrEMBL-Plants: tr|I3SED8|I3SED8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0389300 LjG1.1_chr4 76755861 76757766 -
2 domain predictions
1 GO term
LotjaGi4g1v0432800.1
n.a. Early nodulin-like protein; TAIR: AT2G25060.1 early nodulin-like protein 14; Swiss-Prot: sp|Q9SK27|ENL1_ARATH Early nodulin-like protein 1; TrEMBL-Plants: tr|I1K6B4|I1K6B4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0432800 LjG1.1_chr4 80727336 80728403 -
2 domain predictions
1 GO term
LotjaGi5g1v0052500.1
n.a. Early nodulin-like protein; TAIR: AT2G25060.1 early nodulin-like protein 14; Swiss-Prot: sp|Q9SK27|ENL1_ARATH Early nodulin-like protein 1; TrEMBL-Plants: tr|A0A151TZ59|A0A151TZ59_CAJCA Early nodulin-like protein 1; Found in the gene: LotjaGi5g1v0052500 LjG1.1_chr5 8783510 8787294 +
2 domain predictions
1 GO term
LotjaGi5g1v0199700.1
n.a. Early nodulin-like protein 1; TAIR: AT1G64640.1 early nodulin-like protein 8; Swiss-Prot: sp|Q8LC95|ENL3_ARATH Early nodulin-like protein 3; TrEMBL-Plants: tr|I3SQK2|I3SQK2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0199700 LjG1.1_chr5 49757985 49759645 -
2 domain predictions
1 GO term
LotjaGi5g1v0257500.1
n.a. Blue copper protein; TAIR: AT5G07475.1 Cupredoxin superfamily protein; Swiss-Prot: sp|O82081|UCC1_ARATH Uclacyanin 1; TrEMBL-Plants: tr|I3SPD4|I3SPD4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0257500 LjG1.1_chr5 56632844 56636528 +
2 domain predictions
1 GO term
LotjaGi5g1v0315800.1
n.a. Blue copper protein; TAIR: AT5G26330.1 Cupredoxin superfamily protein; Swiss-Prot: sp|P80728|MAVI_CUCPE Mavicyanin; TrEMBL-Plants: tr|I3T2Y6|I3T2Y6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0315800 LjG1.1_chr5 63361958 63375087 +
2 domain predictions
1 GO term
LotjaGi5g1v0349100.1
n.a. Blue copper-like protein; TAIR: AT3G17675.1 Cupredoxin superfamily protein; Swiss-Prot: sp|Q41001|BCP_PEA Blue copper protein; TrEMBL-Plants: tr|K7LLY0|K7LLY0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0349100 LjG1.1_chr5 66467495 66468834 -
2 domain predictions
1 GO term
LotjaGi6g1v0089600.1
n.a. Basic blue protein; TAIR: AT2G02850.1 plantacyanin; Swiss-Prot: sp|P00303|BABL_CUCSA Basic blue protein; TrEMBL-Plants: tr|I3SCS8|I3SCS8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0089600 LjG1.1_chr6 19024073 19026754 -
2 domain predictions
1 GO term
LotjaGi6g1v0287400.1
n.a. Blue copper protein; TAIR: AT2G32300.2 uclacyanin 1; Swiss-Prot: sp|O82081|UCC1_ARATH Uclacyanin 1; TrEMBL-Plants: tr|I3RZY0|I3RZY0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0287400 LjG1.1_chr6 60484738 60486352 -
2 domain predictions
1 GO term