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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0382200 |
| Transcript ID | LotjaGi1g1v0382200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 14 kDa proline-rich protein DC2.15; TAIR: AT2G45180.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; Swiss-Prot: sp|P14009|14KD_DAUCA 14 kDa proline-rich protein DC2.15; TrEMBL-Plants: tr|B7FMX8|B7FMX8_MEDTR Lipid transfer protein; Found in the gene: LotjaGi1g1v0382200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:86558691..86562125) extracted from Lotus japonicus Gifu genome v1.2.
CACCATACAAACCACATTGCTACTGTTTTTCTCTCAAGCTAGCCATGGCTTCCAACAAACTCTCTGCCATCTTTTTGGTG CTTTCTCTCCTTGCTTACTCAACATTCACTCAGGCTAATGTTTCATGCCCACCACCACCAAAGTCCACGCCCACACCTAC ACCCGCACCCGCACCCAAGCCCACTACTCCCGCCACGCCGCCACAAGCACACTGCCCCACGGACGCCTTAAAGCTAGGGG TTTGTGCTGATGTGTTGGGCCTCGTTCACCTGGTTATTGGAACTCCTCCTACAAGCCCTTGTTGCACATTGATCAAGGGT TTGGCAGATTTGGAGGCTGCACTTTGCCTCTGCACTGCAATTAAGGGCAATGTGCTTGGATTAAACTTGAATGTACCTAT TACGCTCAGCTTGATCCTCAGTGCTTGTCAAAAAACAGTCCCTCCTGGTTTCCAGTGCCCCTAAGATTAATTCAAGTTAT TAGTTTGTCTCAAATGTTTTCAGTGTGCATTGTAGTCATGAGGTGGATGCATGGAGTATAGAAATAAAATCCCCTCATAT CGTATGACAATGTCAAGTAAAATTTTGTATCTATTATTATCTTCATATTCAAGTGATTGTCACCTATGAAGAGAGATATA TGCACAAAATTTTAACATGACATTCTCACGTGAAGTTCAACATAAAAGGATTATGATATTATCTTTGGTATTAGTTTCTT TTGTGTTATAGTTGTTGATTTTCTTTTCTTATGGAGTTTGTTGTTGTTAATGCCGTGTCTGTCCAAACATGTCGTTCTAT TAATTTCCTCTCATGATTCGTCACATTACTAATTAGGCAAGCTTGTTTGCCTTAATTAGTCTCATGAAACATGTTATTTG ATTATTAAATCATTGTTTGCTTTAAGTTATCAAAGTGGGAAAAAGATTTGAACTTGAATTTTTGATGCAAACTACATTCA AATTCGCGAGGATGAGTATTTATAGGTTACTGACAATATTTTCATCGATAAAGTCGATAATAGCAAAAGTTTCAAATTAC TTACAACGTTTCCAACGCTAATGTGGACGATGTCATCAACAGATAAGCAAGTTATCGACTTAGGCCGTCGATATTTGAAC AATGCGTGAGTCAGGCTAGTGACAACCATCTTTGCAGATAAAAAGTCAAAGGCAACTGTTAATCACCAATAATACTTTCT TTAGTTTTTTTTTTCAAATGAAATTTTGTTAGTTAGAGCGAACTTTTGTAAAAGTATAAGTGATAATGTGCATTCTTGTA GCATTAATTAGCCACGACATCGCGACCAAAATTGTGACTGCACCGATTTGTATTTGTCACAATTTTACAACGCAACTATA ACCGCAGTCGCAATTTAAAACTCAACATCTAAACTTTGACACTTAAACTGTAGACTTGGTTTCTATACTCATATAAATGT AGTTAGAGTAATGACTCAAATACATCTCCAGATTATTTTCCATGTTATACATGTACTTCTCTTCAAATACATCTCCAGAT TATTTTCCATGTTATACATGTACTTCTCTCATAATTATGGATTAAACATTTTTTTAGTACCCTTTAGAGAATATGGTGCC TTTTAGTCTATTCTTTAAAATATTGAGGACTAGATTACAAATTATTAAAATTTATTTTATAAGATAATATGACATAAAGC AAAGAGGTACGGAAGCTTGATTTTCTAGGATGTAGGCTAAAGGTGTAACAAAGATAAGAGGAAATGAAATCCTACATATA TTCTCAATCCCATGACATCAACTCCCTCCTCTCTGTTGTGGTTGTGGGGCTAAGCTAAGAAATTAAAATTCCAGAGGAGG TCTGTTCTGAATGGTTTTCTCTGTGATCTTCCACAGCTTTCTTGAACTGTGTAGACTTTACAATTCTCCTACGCAACAGA ATTTCCATGATCACAGTTCATGAAAGCTGTGAAAAATCAACGAGATGATCTGCTTCATCAATCTTTGAACCACTCTATAT ATCAGGTTTCGCATAACTCGTTTCAATTAATCTCCTTTAGTGTAGCTCTCTTCTCTGTTCTCGTTGAATTGCTCTGTTTT GAATTAAAACAAACTAGGAGTTGTCAAGTTTCATTTACACTAGTTCTCAAGCTAGAAGTTACAACTCGCAATGCACTTAA ATTTTCTCCTTTTTTTCTCTTTCTTTTAAATTCTTCTGTCTTCTTGTGTCTTCAATTGATAATTTTCTTATCGATGCAGC AAGAATTCTACAAAATTGTTTAAATAAATGATATAATGTATATGCATTTTTGTTTTTAAGGGGTGTATTATGCAGATAAT TATTACAGAGAAGAATGTGGCTGTGGCGTGAGGTACTCAAGCTTAATCAGAGGAGGGAAGTCCCGTGACGCTTTGTGATA CTCAGAATCAAACCTTTGCAGAAAAAGGAAAAACCAATGTATGGGCGTGTTTGCTTTTTTTAAGGAGATTGTAAGAGATG GACCTACTGTTGCAAAATGCATACAAAGCCAGAGAGAGCTAGTCAATGTTTGCGACTCTGCATTTCATGAGTTGACAGTT GAAATCATAAAGGAAGCGTGAAATATGAGGCTCATTGTGAAAAAGCTTTGGGATTAGGGGAGCCTGACAGAATTACTCAG AATAGTGTTGACTGAGAGAGTGACAATAAGTTTTGATGGTTCTTCCCTCCAACAGGTTGATTATCCAGGCTGGGAAGTGC TGATTCATTGTCCAACCACACCCACCACACCAGTGGGGGACTTGTAATAACACTCGGACGCTCAAGTTTGAAGGTGAGTA AGAAGTAGGAGGTGGAAGATAAAGTAGTGTGTACCTTGCTTAATGTGGAATCCCCCTTTTATAAGGCTAGAGTCTTTATG GTTCTGAGATTGAGAAGTTTGAGGTTGGATGTGATGATGGGTACGAGGTCCAGTGGCGATGGAGGGCCGTAGGATCTTTT GACGCGCTGCTTAATCTAACGGATAAAAGTGAGTTAACTTAGTGTTGCGTAGTCCTTGAGCCTCGAGCCAGTTCCTCGAC TATGGATGAGACATGATGGATTAATTGTTATATTGTTTTAATTAACTCTCTATTTTGGTTAAGTGAATTAACATGAATCA ATTAATTTACTGATTCATGTATTAGGATGAATGATATACTGGACTTTCGTTATTAATTGACATGTGAAGAGTTTGGTCAC TTACATAAGCATATGAGAGGACCCGGATCTCATCCATTTATCTTCAAACTATTTCCCCTTAGACAATTTACTTAGCGTGT GGCAAACACATTGTTCATAAAAAAAAGAGCAGTTCAAACTCTCACGTTCACACTTATGTTGCCAAAATAGAGAGCACAAC AATTGATTATTAATTACACCACGTACACAATTTCTCCACAGTATCCAAAAATATAACATGTTGTAATATGTGTCT
CDS sequence (LotjaGi1g1v0382200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCCAACAAACTCTCTGCCATCTTTTTGGTGCTTTCTCTCCTTGCTTACTCAACATTCACTCAGGCTAATGTTTC ATGCCCACCACCACCAAAGTCCACGCCCACACCTACACCCGCACCCGCACCCAAGCCCACTACTCCCGCCACGCCGCCAC AAGCACACTGCCCCACGGACGCCTTAAAGCTAGGGGTTTGTGCTGATGTGTTGGGCCTCGTTCACCTGGTTATTGGAACT CCTCCTACAAGCCCTTGTTGCACATTGATCAAGGGTTTGGCAGATTTGGAGGCTGCACTTTGCCTCTGCACTGCAATTAA GGGCAATGTGCTTGGATTAAACTTGAATGTACCTATTACGCTCAGCTTGATCCTCAGTGCTTGTCAAAAAACAGTCCCTC CTGGTTTCCAGTGCCCCTAA
Protein sequence (LotjaGi1g1v0382200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASNKLSAIFLVLSLLAYSTFTQANVSCPPPPKSTPTPTPAPAPKPTTPATPPQAHCPTDALKLGVCADVLGLVHLVIGT PPTSPCCTLIKGLADLEAALCLCTAIKGNVLGLNLNVPITLSLILSACQKTVPPGFQCP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 24 | 24 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 24 | 24 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 24 | 24 | - | – | |
| PANTHER | 1 | 138 | 138 | 1.9E-47 | – | |
| PANTHER | 1 | 138 | 138 | 1.9E-47 | – | |
| SignalP_EUK | 1 | 24 | 24 | - | – | |
| Phobius | 1 | 5 | 5 | - | – | |
| Phobius | 6 | 17 | 12 | - | – | |
| Phobius | 18 | 24 | 7 | - | – | |
| Phobius | 25 | 139 | 115 | - | – | |
| MobiDBLite | 27 | 54 | 28 | - | – | |
| MobiDBLite | 29 | 53 | 25 | - | – | |
| Gene3D | 51 | 139 | 89 | 5.0E-27 | – | |
| SMART | 57 | 138 | 82 | 1.4E-7 | ||
| Pfam | 57 | 139 | 83 | 9.3E-28 | ||
| CDD | 57 | 138 | 82 | 3.57035E-30 | ||
| SUPERFAMILY | 60 | 139 | 80 | 7.23E-25 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0382200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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