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LotjaGi1g1v0382400.2

Overview

Field Value
Gene ID LotjaGi1g1v0382400
Transcript ID LotjaGi1g1v0382400.2
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Adenine phosphoribosyltransferase-like protein; TAIR: AT5G11160.1 adenine phosphoribosyltransferase 5; Swiss-Prot: sp|Q9LFP0|APT5_ARATH Adenine phosphoribosyltransferase 5; TrEMBL-Plants: tr|I3S3L6|I3S3L6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0382400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:86581219..86583895) extracted from Lotus japonicus Gifu genome v1.2.

ATGTTCGCTTCAGAAAATGGGCTTAAAGGAGACCCAAGACTTCAAGCAATCACCAAAGCCATCACAGTTGTCCCTCACTT CCCCAAAAAGGGTCTCTAACTCTCTCTCTCTCTTCTCTCTTTGTTTTTCCAATTATTTTATTTCATCATTCTTATGCTGT CTCTGTTCCCTCTTCAATTCACTCACATGGCCTTTGTTTTCTTTCAGAACTTTTGTCGAACAGATAACCTACTATTCATT TTTTTAATGTTGGGTAATTTGCAGGAATCATGTTTCAAGACATCACGACATTGTTGCTAGATCATAAGGCGTTTAAAGAT ACTATCGACATTTTTGTCGATCGTTACAGAGACATGCACATTTCTGTTGTGGCTGGTAGTACCCTCACTCTACTCTTCAG CTACTACTTTTTTTTCTTATTGTTTCACAGTAAAAATAAGGTAAATTTAACAAGGTGAAGCTAAAATTTAATGGGGTTGT TAAAAGTAGCTCAAAGGGGTCTTTTTTCTATTTTTCTGTTGTAGTACTAGTAGTAATATTCAAGAATAGAGCTTGGTTTA TGATTCTGATTTTTTTAATTTGATTGATAAATTGATGATGATTAGTCTACATATTATGTGTTTAGGGTTTACATTTATGA GCTATTGTTATGGGATTTGGCCTATGGTTGGTTAACATATTGCTATGGATTACATGTAGGCATTGAAGCCAGGGGATTCT TGTTTGGTCCCTCAATTGCATTGGGTATCGGTGCTAAGTTTGTTCCCCTGCGAAAACCTCGGAAGCTGCCAGGTAATTTG GTTGAATGTTGATGCATAAACTACATCTAAACTTAATTAGTGTTAAATGAAAGTTGAAAGTGCTGAAACTGGTGTTGCTG ATCTGCATTGAGCAATCTTATCAACATATCTACTCTTTTTTGTGATCCTAGATTATCAAATTGGGTTATGGCTGCATTCA ATTTATGAAAACTGGCTGAAAATGCTATGTATTGAGTGATCAAGATTGCATGAATCACAATTGCACGAGACGGGGAAAAT GTATCTTTTTTATTTAAAGTTCACTAACAGGGGCTAATTAGGATAAATTGTATGCTTTATAATAGGGATTTCAAAATAAT TTAGCTGTAGTAGCTTATTTCAGCTTACTTTCGTGTACTAAATAACTAAGCACAATCATCTGAGAGTAAGGTGGAGGTAA CTTTTGGAGCTGTATATATCTACTTAAAGTTTTAGTCTCATTGCTGAACTGTGCCTATACATTATGCCTAAACTTTGATA TACTTTATGTTTAGGTGAGGTATTTTCTGAAAAATATTCTCTAGAATATGGCACTGATTGTTTGGAGCTGCATGTTGATG CTGTCCAGCCCGGTGAACGGGCCATAGTTATTGATGATTTGGTGGCCACAGGTGGAACTCTGTCAGCAGGAGTAAAACTT CTAGGTGATTTACAAGCTCTTTTCTCATGCTTATTTATTTCAGTTATGATTGTTCAACGTATATGGTCCCAAATGCGCTA CATGGTTTCTTTCAACTTAATTTGTAGAACGTGCTCATGCGGAAGTAGTCGAATGTGCTTGTGTGATTGGTGTGCCTGAT GTTAAGGTAATGTCTAACCTTTTATAAGTTATGTTTGCTTTGCTAGTTAATCTCAGAAGTTTCTATCTTATTATAGGTAA TCCTACAGCTAAAAGTTCTTGACCAAAAACGACTGAAAAAATAAACAAATTAAAATTCACGTGTTGTTTCTCATATTGAC AGCCTAATGGACTTTAATTTGTAGGACATAATCTGTCCCGTGATTTTAAGATCATGAGTGACCAATTTATATCATTCTAG ATGTGCTTATAGTTATTACAATATTTTTAGCTTCTAAATAATCTCAATAACCCTGAAAAGGGACTTGTACAGGCCAATAT AGTTACAACATAATGCTGGTAAAAGGAATTATCTATTACTAGTTAGAACCTAAATTACTTAGGTCTAGAATTCTAGATTG CAGAATTTATTTTAATGTTAACTCATTGAAGATGCCAACCTTTCTAAGTGTCATTATTGAAATGAGACTGTCTCCTTCTA TTTTGTGTACTATCTGATTTTTCCCAATTCTTGTTAATATATAATAGTACGAGTATTTATGTTTGTAGGGATAAATTGTC TTTAGACACAAAAGTATCTCTTTCTCTTCTCATTTTAATTATCATACCAAACAATCTACAAAATCTACCCTCTTTCTTAT CTTTCTCTCTACACATCTTCCCGCTCTCCTAACCCAAACAAAGTTCTAAGGAAGAAAGCAAAAAGTCCTTCTACCTCTAC CTTACTTTGTACCTAACCTGAAACTTTGTGGATAAATATCCACTGGTTTGTGGAGGTTGTACCTTGCTTGTTACACGTGA ATTTTCCTTCTATAAGTTCTTATTTTCCTGAAATCATGGAAATGCAGTGTTCATTATGCTTTCTCTTTCAGGGACAGTGC AGGCTCATTGGAAAGCCACTTTATGTCCTTGTGGAGCCCCGTCAAGTAGATAAATGTTTTTGAGGTACGTCACTGTATCC TGAAGTGGAAATTCTGATGGTACAATTTGCATAACATGATTGTGTTTGGAATAACTGTTCATTTTGCTCCATGATCTCAA TGTCAGCAGATTACAAACATTCTTTAGCTCTTTTTAG
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0382400.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTTCGCTTCAGAAAATGGGCTTAAAGGAGACCCAAGACTTCAAGCAATCACCAAAGCCATCACAGTTGTCCCTCACTT CCCCAAAAAGGGAATCATGTTTCAAGACATCACGACATTGTTGCTAGATCATAAGGCGTTTAAAGATACTATCGACATTT TTGTCGATCGTTACAGAGACATGCACATTTCTGTTGTGGCTGGCATTGAAGCCAGGGGATTCTTGTTTGGTCCCTCAATT GCATTGGGTATCGGTGCTAAGTTTGTTCCCCTGCGAAAACCTCGGAAGCTGCCAGGTGAGGTATTTTCTGAAAAATATTC TCTAGAATATGGCACTGATTGTTTGGAGCTGCATGTTGATGCTGTCCAGCCCGGTGAACGGGCCATAGTTATTGATGATT TGGTGGCCACAGGTGGAACTCTGTCAGCAGGAGTAAAACTTCTAGAACGTGCTCATGCGGAAGTAGTCGAATGTGCTTGT GTGATTGGTGTGCCTGATGTTAAGGGACAGTGCAGGCTCATTGGAAAGCCACTTTATGTCCTTGTGGAGCCCCGTCAAGT AGATAAATGTTTTTGA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0382400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MFASENGLKGDPRLQAITKAITVVPHFPKKGIMFQDITTLLLDHKAFKDTIDIFVDRYRDMHISVVAGIEARGFLFGPSI ALGIGAKFVPLRKPRKLPGEVFSEKYSLEYGTDCLELHVDAVQPGERAIVIDDLVATGGTLSAGVKLLERAHAEVVECAC VIGVPDVKGQCRLIGKPLYVLVEPRQVDKCF
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11776
1 187 187 2.8E-111 –
PANTHER
PTHR11776:SF21
1 187 187 2.8E-111 –
Gene3D
G3DSA:3.40.50.2020
8 187 180 2.3E-60
IPR029057
Hamap
MF_00004
17 184 168 32.897
IPR005764
TIGRFAM
TIGR01090
18 182 165 6.1E-59
IPR005764
SUPERFAMILY
SSF53271
20 176 157 2.88E-44
IPR029057
Pfam
PF00156
42 165 124 3.6E-15
IPR000836
CDD
cd06223
51 183 133 2.17263E-24
IPR000836

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003999
Molecular function Adenine phosphoribosyltransferase activity Catalysis of the reaction: AMP + diphosphate = adenine + 5-phospho-alpha-D-ribose 1-diphosphate.
Subterm of
GO:0005737
Cellular component Cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
Subterm of
GO:0006168
Biological process Adenine salvage Any process that generates adenine, 6-aminopurine, from derivatives of it without de novo synthesis.
Subterm of
GO:0009116
Biological process Nucleoside metabolic process The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (a ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleoside), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine).
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0382400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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