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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0383800 |
| Transcript ID | LotjaGi1g1v0383800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | F-box protein; TAIR: AT2G25490.1 EIN3-binding F box protein 1; Swiss-Prot: sp|Q9SKK0|EBF1_ARATH EIN3-binding F-box protein 1; TrEMBL-Plants: tr|I1JUC8|I1JUC8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0383800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:86712944..86716738) extracted from Lotus japonicus Gifu genome v1.2.
ATTGCATTTGGGATACATTCACTGTATCTTCACTGTCACATGTTTCCCACTCACAAATATAAACCACACCTTTGACAATC TCAACCTTCACTTTCTCTTTCATCAATTTTTTTTTTGCCCTCTCTTAGGGTTTCACCTCTCTCTCTCTTCTCTGCTTCTG CTCTCTCATGCATTCTTGCTCCCAACAATTCTTCTCCATTGCAATTGCCATCACCATCTTCCTCTTCTCCTTCTTCTCTG CCTTTTTAGCTCTCGTTCGAGGGTTCTTTTGTGGTGATCAGTGCAGATTTGATCTCTCCCGGTTTTTCCAGCTGCACCCA TGTCTCAAGTTTTCAGCTTTTCTGGTAGTCTCTTGATTCCTTAGCATTTTTGTCCTGATTCGCTTATTTATGGTTCTGTT AACTCGATTGATTGTTTTTTATTGCTGATTGGAGGTTGCAATAGAATTGAAAGTTTGAAATACAATTTTTTGTTGTTGTA TGATGGTTTTCTATGTTTGTTTCCTAGTTTGGTTTGTGGTCAAGATTGCTATTTGATTTTTTTGCAAATTCATGGTTTTT TTGTTAGATCTGATTAGCTATATGAAGTATGAATAGATTCAGGGTATATTTTTATTTATTGATTTATTGATATGAGATAG GGTATAATTCAGCATTCAATTGTTTTAGGATTTTGTTTTTAGGGCCATTTTTTGGGTATCTTGTAGTTATTGTTGTTTTT TTGTGGAAATTCTATCTTTTTTTTTAGATCATAATTTATTTTGTGTACATATGTATGAGATTAGTAATTTTGTTCTAGGT TGACCTTAGGTGGCTGTTGTGTTTAGAGGATGGGTTGGATTTCATAAACATGTGGTTTATATTGTTTGTTCAATTTTTTA TTTCACTCATAGGATAGATGATATTTCTGCGATTTTACTGGTGGAGTTTACATGTTTCTTTACCTTTTATACACAATTGG TTCTTAAATTGACCTTGCATACATTTGATTTTTCAGGAAATGATGATTTTTACTCTGGGGAGTCTTTATACCCTAATCCC AAGGAAGCGAATCTCTTCTTGTCCCTTGGCCTACAAGTGGAGGCTTACTTTCCTCTGCCGAAGAGGTCTCGCATCGCTGT CCCATTTGGTATCAAAGGAAACTGGTTTGACTTTGAGCAGAAGCAGGAGACGTGTATTGAAACTTTGCCAGATGAATGCC TCTTTGAGATCCTCAGAAGGTTGCCTGCAGGCCAGGATCGGGGCAATTGTATGTCTGTATCCAAGCGCTGGCTTATGCTT CTAAGCAATATTTGCGAGAACGAAATCTGCGGCAACAAAAGTACCGGAAATGAAAATGGTGAGCAGGAGGAGGGTGACCT GGAATTTGGAAATGAAGGATTCCTCACTCGAAGCTTCGAAGGGGAAAAGGCAACAGATGTTAGGGTTGCTGCTATGTCTG TTGGGACTGCCTCTCGCGGAGGACTAGGGAAGCTCGCAATTCGTGGATGCAATTCAGATCGTCCGGTGACTGATGTAGGT CTCAAGGCAATTGCTCATGGATGTCCTTCTCTGAAGATTCTCACTCTATGGTGTATCCCTACCATTAGCGATGAAGGCCT GATTGAGATTGCTAACAGGTGTCACCAATTAGAGAAGCTTGAGCTTGGCCAGTGCCCCAATATTTCCGGCAAGGCTTTTG TTGCAATTGCAAAGAACTGCCCGAGTCTGACCCACTTCTCAATTGAGTCATGTCCTAACATTGGTAATGGAGGTTTACAA GCTATTGGGAAGTGTCCCAATCTAAAGTCTGTATCCATTAAGGACTGTGCTGGGGTTGGTGATCAGGGAATTGCTGGCCT GATATCTTCAGCTTCTTTTGTTCTAGAAAGGGTGGTGCTTGAGTCACTAGCTGTTTCTGATCTCGCACTAGCAGTTATTG GACACTATGGCATTGCAGTTACTGATCTCGTCCTAAATTGCCTCCCTAATGTCAGTGAGAAGGGATTCTGGGTTATGGGC AATGGTCGTGGACTGCAGAAACTAGCAGCACTTGGAATTGTGTCCTGCCGTGGAGTAACCGATATCGGCCTTGTTGCTAT AGGAAAGGGTTGTCCTAATATGAAAATCTTCCAGCTTCAGAAGTGTGCATTTCTCTCTGACAATGGGTTGGTATCATTCG CCAAAGCTGCTCCATCGATTGAGAGCCTATATTTGGAAGAGTGCCACAGAATTACCCAACTTGGGTTTTTCGGGCTCCTT TTTAACTGTGCTGCGAAACTGAAGGTTCTTAGCCTGGCAAGCTGCTATGGGATCAAGAATCTGAATCTCCGACTGCCTGC AGTACTTCCTTGTGGATCAATTGAGTCATTATCAATCCATGACTGCCCTGGATTTGGTGATGCTACCATTGCTGTACTTG GAAAGTTGTGTCCTCAGCTTGAGCATGTTGAATTGAATGGACTTAGTGGAATCACAGATGCCGGGTTTCTTCCCCTGCTT GAGAGTTCAGGGGCTGGTTTGGTTAATGTTAATCTCAGCGGCTGCACTAAACTGACCGACCAAGTTGTTTTGTCGCTGGT CAAGTTGCATGGATGTTCTCTTGAAGTGCTAAACCTTAATGGTTGTAAGAAAATCAGCGATGCAAGCTTGATCGCAATTG CAGGCAGCTGCCCATTGCTCTCTGATCTTGATGTTTCCAGGTGTGGAATCACCGACACTGGGATTGCTGCACTTGCACAT GGGAAGCAGCTCAATCTGAAGGTACTTTCTCTGGCAGGTTGTACATCAGTTTCTAACAAGGGTGTGCGCGCTTTGAAAAA GCTTGGCAGTTCCCTCGACGGATTAAACATCAAGAATTGCAAAGGAATCAGCTACCGCTCACTTGACATGCTTGTGCAAG ATCTCTGGTCCTGTGACATCCTCTTCTGAGAAGAAGGAAGCGTCAATCTCACAGCAAAATCTTCCTCCTTCTCAGTTTTT TTTTCATAGTGTTTTTCGGTCCATTAGCTATGGTGGGTCTTGGTCATCATCTAGCACCTGGTTCTCTTTTTCCAGAGCAC ACAGTCATTTCACCATTATTTTTTTGCAGTTTTCCATCAATTGGAAATCTGTTGAAGTTTTTGGCATTCCCAGGAACGCC GCTTTTGGAATGACTGTTAATCTCTGAGAACATAGTTACCAGGTCCTGGAGTTAGGTCTCTTTTCTTTTGTCTAGTGGTG TTTTACCAAATGTCTCACCTATTGAACTGTGTTCTTTACGTGATATTTGGGTCTTCTCAGTATTTGGGTCTTGTCAGTTT TAGTCAAGGGGCATGTTGAAGTTCCAGTTTATGTGCTGTTGTTACCTATTGGCACAGTTCAGAGGTATTATGTTGATGTC TTCTTCAGGGGCTTTGGCCATGGCAGAAGGTTATGCAATTCTGCCATGACAACCTTAGGTTGTTTTTTCCTACCAAAGCC CTTGGTTTTTAGGGCATCATTTTTTTTTCTCTGAACTTGTCGTTGTAACTTCTGTAGTGATGATACTGAGATTTGCCCTT TGTATTGCATGCTGTTTTATTGAAAGTAATGAATAAACAACCTTGGGTTGAAATTTTGTTGTCCCTGTGATCATTGTATC CTAATCTTTATACAATCATGTCTTAGTATAATATATCGTTTGGAAGAGTACATATGTACTTTTCTTATAGCCTAAGCGAT TATGCAGGCACTGCTTACGACTTATCAAAGTTATTTTGATGTTATTTTCAAAGCAATGAATAAGTGTTTATGTGTAGAAC GTGTTTAATTAAATTGTCTTTTTCAAAACCCCCCC
CDS sequence (LotjaGi1g1v0383800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTCAAGTTTTCAGCTTTTCTGGAAATGATGATTTTTACTCTGGGGAGTCTTTATACCCTAATCCCAAGGAAGCGAA TCTCTTCTTGTCCCTTGGCCTACAAGTGGAGGCTTACTTTCCTCTGCCGAAGAGGTCTCGCATCGCTGTCCCATTTGGTA TCAAAGGAAACTGGTTTGACTTTGAGCAGAAGCAGGAGACGTGTATTGAAACTTTGCCAGATGAATGCCTCTTTGAGATC CTCAGAAGGTTGCCTGCAGGCCAGGATCGGGGCAATTGTATGTCTGTATCCAAGCGCTGGCTTATGCTTCTAAGCAATAT TTGCGAGAACGAAATCTGCGGCAACAAAAGTACCGGAAATGAAAATGGTGAGCAGGAGGAGGGTGACCTGGAATTTGGAA ATGAAGGATTCCTCACTCGAAGCTTCGAAGGGGAAAAGGCAACAGATGTTAGGGTTGCTGCTATGTCTGTTGGGACTGCC TCTCGCGGAGGACTAGGGAAGCTCGCAATTCGTGGATGCAATTCAGATCGTCCGGTGACTGATGTAGGTCTCAAGGCAAT TGCTCATGGATGTCCTTCTCTGAAGATTCTCACTCTATGGTGTATCCCTACCATTAGCGATGAAGGCCTGATTGAGATTG CTAACAGGTGTCACCAATTAGAGAAGCTTGAGCTTGGCCAGTGCCCCAATATTTCCGGCAAGGCTTTTGTTGCAATTGCA AAGAACTGCCCGAGTCTGACCCACTTCTCAATTGAGTCATGTCCTAACATTGGTAATGGAGGTTTACAAGCTATTGGGAA GTGTCCCAATCTAAAGTCTGTATCCATTAAGGACTGTGCTGGGGTTGGTGATCAGGGAATTGCTGGCCTGATATCTTCAG CTTCTTTTGTTCTAGAAAGGGTGGTGCTTGAGTCACTAGCTGTTTCTGATCTCGCACTAGCAGTTATTGGACACTATGGC ATTGCAGTTACTGATCTCGTCCTAAATTGCCTCCCTAATGTCAGTGAGAAGGGATTCTGGGTTATGGGCAATGGTCGTGG ACTGCAGAAACTAGCAGCACTTGGAATTGTGTCCTGCCGTGGAGTAACCGATATCGGCCTTGTTGCTATAGGAAAGGGTT GTCCTAATATGAAAATCTTCCAGCTTCAGAAGTGTGCATTTCTCTCTGACAATGGGTTGGTATCATTCGCCAAAGCTGCT CCATCGATTGAGAGCCTATATTTGGAAGAGTGCCACAGAATTACCCAACTTGGGTTTTTCGGGCTCCTTTTTAACTGTGC TGCGAAACTGAAGGTTCTTAGCCTGGCAAGCTGCTATGGGATCAAGAATCTGAATCTCCGACTGCCTGCAGTACTTCCTT GTGGATCAATTGAGTCATTATCAATCCATGACTGCCCTGGATTTGGTGATGCTACCATTGCTGTACTTGGAAAGTTGTGT CCTCAGCTTGAGCATGTTGAATTGAATGGACTTAGTGGAATCACAGATGCCGGGTTTCTTCCCCTGCTTGAGAGTTCAGG GGCTGGTTTGGTTAATGTTAATCTCAGCGGCTGCACTAAACTGACCGACCAAGTTGTTTTGTCGCTGGTCAAGTTGCATG GATGTTCTCTTGAAGTGCTAAACCTTAATGGTTGTAAGAAAATCAGCGATGCAAGCTTGATCGCAATTGCAGGCAGCTGC CCATTGCTCTCTGATCTTGATGTTTCCAGGTGTGGAATCACCGACACTGGGATTGCTGCACTTGCACATGGGAAGCAGCT CAATCTGAAGGTACTTTCTCTGGCAGGTTGTACATCAGTTTCTAACAAGGGTGTGCGCGCTTTGAAAAAGCTTGGCAGTT CCCTCGACGGATTAAACATCAAGAATTGCAAAGGAATCAGCTACCGCTCACTTGACATGCTTGTGCAAGATCTCTGGTCC TGTGACATCCTCTTCTGA
Protein sequence (LotjaGi1g1v0383800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSQVFSFSGNDDFYSGESLYPNPKEANLFLSLGLQVEAYFPLPKRSRIAVPFGIKGNWFDFEQKQETCIETLPDECLFEI LRRLPAGQDRGNCMSVSKRWLMLLSNICENEICGNKSTGNENGEQEEGDLEFGNEGFLTRSFEGEKATDVRVAAMSVGTA SRGGLGKLAIRGCNSDRPVTDVGLKAIAHGCPSLKILTLWCIPTISDEGLIEIANRCHQLEKLELGQCPNISGKAFVAIA KNCPSLTHFSIESCPNIGNGGLQAIGKCPNLKSVSIKDCAGVGDQGIAGLISSASFVLERVVLESLAVSDLALAVIGHYG IAVTDLVLNCLPNVSEKGFWVMGNGRGLQKLAALGIVSCRGVTDIGLVAIGKGCPNMKIFQLQKCAFLSDNGLVSFAKAA PSIESLYLEECHRITQLGFFGLLFNCAAKLKVLSLASCYGIKNLNLRLPAVLPCGSIESLSIHDCPGFGDATIAVLGKLC PQLEHVELNGLSGITDAGFLPLLESSGAGLVNVNLSGCTKLTDQVVLSLVKLHGCSLEVLNLNGCKKISDASLIAIAGSC PLLSDLDVSRCGITDTGIAALAHGKQLNLKVLSLAGCTSVSNKGVRALKKLGSSLDGLNIKNCKGISYRSLDMLVQDLWS CDILF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 47 | 630 | 584 | 4.5E-291 | – | |
| PANTHER | 47 | 630 | 584 | 4.5E-291 | – | |
| SUPERFAMILY | 66 | 105 | 40 | 1.31E-7 | ||
| Pfam | 69 | 107 | 39 | 1.9E-6 | ||
| Gene3D | 70 | 106 | 37 | 1.5E-5 | – | |
| SMART | 72 | 113 | 42 | 4.1E-6 | ||
| Gene3D | 154 | 256 | 103 | 3.0E-23 | ||
| SUPERFAMILY | 164 | 351 | 188 | 1.88E-23 | – | |
| SMART | 191 | 216 | 26 | 0.027 | ||
| SMART | 217 | 242 | 26 | 1.0E-4 | ||
| Pfam | 242 | 265 | 24 | 0.58 | ||
| SMART | 243 | 268 | 26 | 6.2E-4 | ||
| Gene3D | 257 | 450 | 194 | 1.2E-29 | ||
| SMART | 269 | 293 | 25 | 9.6 | ||
| SUPERFAMILY | 324 | 641 | 318 | 1.22E-31 | – | |
| SMART | 348 | 373 | 26 | 0.015 | ||
| SMART | 374 | 399 | 26 | 7.5 | ||
| SMART | 400 | 425 | 26 | 60.0 | ||
| Gene3D | 451 | 644 | 194 | 6.1E-30 | ||
| SMART | 454 | 479 | 26 | 7.6 | ||
| SMART | 480 | 505 | 26 | 3.5 | ||
| SMART | 507 | 532 | 26 | 3.9 | ||
| SMART | 534 | 559 | 26 | 9.6 | ||
| Pfam | 535 | 557 | 23 | 0.059 | ||
| Pfam | 560 | 582 | 23 | 0.011 | ||
| SMART | 560 | 584 | 25 | 5.4E-4 | ||
| SMART | 586 | 611 | 26 | 11.0 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0383800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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