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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0384300 |
| Transcript ID | LotjaGi1g1v0384300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone DnaJ; TAIR: AT3G47650.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein; Swiss-Prot: sp|A6WX07|DNAJ_OCHA4 Chaperone protein DnaJ; TrEMBL-Plants: tr|I3SGK9|I3SGK9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0384300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:86769627..86772244) extracted from Lotus japonicus Gifu genome v1.2.
TTCTCGTTGAAGAGGAAAAAAAATATCTGAGTGATAATATCTCAATCCGTCATTCTTTCCCTCAATGTGAGAACCAGAAT ATCTATCAGCACCACTTCAACTTGAACAAATTTTAGTCTGGTTATCCTGTTAATCTTTCAATGGTTCCTTCTCTGTGCTT AACACCTCGAAGCTCCCCAACACTAGGTCACCCCCAACAACTAGAAACCCACAAAAAACAAAAGCATTGCATCAGAGTGA ATCGTTTGTTTCAAGGCCCTCCCACTGATAAATTTAGCTTCCTCACTGCAAAGGTAATGGTCATCACTTTATTTCAATTC AAGTAATTTCTTCCTTAAGCAATTAAGTTTAAATAGAGTATTTACCCAAATGATCTGGGATAGTAGTTGACTAGTTGTGC TTGTTTTAGGCTTTTAGCTAATGTTTTTCATTCATGTAGGCTGCCAATGGCAACCAACAAAATACAAAACCCAACAGTGT CATTTGTGCTGATTGTGATGGAAATGGTAAAGATGTCCTCTGATTTTATGTGGCTAGTAAATGCATATTGATTTCAATTG GGGAAATTCTGTTATACTCATTTTGATACAAGTATGAGATAGTTAGGATGTAGAGAAAATGAAATTTAGGATAAGATGAG TAATTCAAAGGAGAGATTGTGCAAAAATAAACATAGAAATTAGTGTTTGTTTAGATATCAGTCGAGTTAAAGTGAAAGCA TACCTCAAAGTGAATACTAACATCGGTTAGCACTAGCGCCAACGAGTACAATGTAATCGTGTTTGGTTTTCGGTTACAAT CACCTAAAAGTACTTTTTCTCAATCTATTATAATACAAAGGTGGTGTTTGGGTTTGAGGTAGAATGTACATTCAACAGTT TTGGAAAGCGAGATGCAGCATCACGAGGGTGTGAATGTGAAAGGGGATATCTTAAAAGAACTTTAATTGCTAATGGAAAT CCAAAGACACTTATGTTGGCAAATGGCAACTTAGGTGCGGATTAATGGATGCTTCTTGTATTTGGGGTCCATTGCCTTAC CAACTCAAGATATGCTTATTGGACTTTACATATTAACGAGCGCAAATCGTCGAGGTATTTGTGCAAATAGGTATAATCGA AGTAATTGGAAAAATGAAAAAAAAAAATCTATTGTTTAGATAAACAAGTCTAACCAAATAATGTAAAAGGACTTGTTTGG TTAAGTTGAAGTTGGCAGTAGTTAGATGAGGAAGGAATGTTTGTTCTTATTCAAATTCATTTGAGGTACTAGAGAAGACA AGAAACAAGAGACAATGTTTACTATTTGAATGATTAGTTTTGTTGTGTGATTAACAGGAGCTGTTGTCTGCTCTCAATGC AAAGGTAATGGGGTGAATTCTGTTGATATTTTCAACGGACAGTTTAAAGCTGGTGACTCTTGTTGGCTTTGCGGGTACAA AAATAAAACCATTCTACTCCATATATGATATAACTTTACATGTGCTATATCTGTAGTAATACAGAAGAACCTGCTTTTTT TTTTCTTGAAGCATTCTAAATTTGAGATTCTTGAATTTCCAAAAATGCAAAGAAGCCCAGCATTATTGGCATTCTTTCCC CCTTGATGCCCACATGATGACCACATCCCCTTCCATTAATCAGTATTAAGCTCATACTTTTTTTGCTTTTGACATATGAT TCCACAACCTTTATTTTTCTTTATCTCTGTAGAGGCAGGAAGGAGATGCTATGTGGGAATTGCAATGGAGCTGGCTTTAT TGGTGGCTTCTTAAGCACTTATGATCAGTAGGGATCCAGTGATTACTTACCTGAATGAGTTCAGTATTTCTAACAATGTA CATATATTGTGACTTCAGAGTCACGCACACAAGCCAATAGCTAATACGCAGAGCTTATGAAATATGCGATTGTTATAAAT TACAAGATTCTCAAAGTTTTCAAAGATGCTAATTTGCTCATTATTATTGATAGTCATAGTAGAAACAGCCCTAATTAACA TATGTTTGGGTTGACGTTCGATTTGCATCTATGTGACTATGTGCATTTGAAAATAGATTCATGCTTTTCAATGGAGGAAT ATGTTGAAGGAGTGATCTTCCTTCAACCTGAACAAGATGATCTCTGATTGAGCAGAGTGGCGCTCGGTTGAGAACTTGGT CGTGCTCGCACGACGGTGGAGGTACCGGTAAAAGGCACTCCGACGCTCAAGTTAGATCAAAATGAGAGTGAGAATCTCTT ACAATAGCAAATGCGAGCAAATGAGTTGTTTGAATAGCTTACAATGTTTGCAAACCCTTATATACATGCTCTTCTCGTGT GATCAAGTGCATGATAGTTTGCCAACGTGGCATAATTGAATGACCATATGGCATAACGACTTAGCCCTCACTGAAACAGC TTGACCACGGTTCCAATAACTCAACTTCTACGATTAAGTCAGTTGGTTAGAACAATGGAAGTCTCATACTCCTTTGTCTG ACCTGTGACTTTACCGTGGAATTAAGTCTGGTTGTCTTGGACCGTTCTTGATGGCGTTTGGGCCATGTGGTCGGCCATCG GCCCAAAACATTAGCCATCATCTCGACATGTAATGTAAGTGAATTTTTTTTTTATGAT
CDS sequence (LotjaGi1g1v0384300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTCCTTCTCTGTGCTTAACACCTCGAAGCTCCCCAACACTAGGTCACCCCCAACAACTAGAAACCCACAAAAAACA AAAGCATTGCATCAGAGTGAATCGTTTGTTTCAAGGCCCTCCCACTGATAAATTTAGCTTCCTCACTGCAAAGGCTGCCA ATGGCAACCAACAAAATACAAAACCCAACAGTGTCATTTGTGCTGATTGTGATGGAAATGGAGCTGTTGTCTGCTCTCAA TGCAAAGGTAATGGGGTGAATTCTGTTGATATTTTCAACGGACAGTTTAAAGCTGGTGACTCTTGTTGGCTTTGCGGAGG CAGGAAGGAGATGCTATGTGGGAATTGCAATGGAGCTGGCTTTATTGGTGGCTTCTTAAGCACTTATGATCAGTAG
Protein sequence (LotjaGi1g1v0384300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVPSLCLTPRSSPTLGHPQQLETHKKQKHCIRVNRLFQGPPTDKFSFLTAKAANGNQQNTKPNSVICADCDGNGAVVCSQ CKGNGVNSVDIFNGQFKAGDSCWLCGGRKEMLCGNCNGAGFIGGFLSTYDQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 19 | 131 | 113 | 2.4E-58 | – | |
| PANTHER | 19 | 131 | 113 | 2.4E-58 | – | |
| SUPERFAMILY | 61 | 122 | 62 | 1.57E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0384300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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