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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR036410
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We have found 36 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.986s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0054200.4
n.a. Chaperone protein dnaJ-like; TAIR: AT3G17668.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein; Swiss-Prot: sp|Q8GSJ6|LQY1_ARATH Protein disulfide-isomerase LQY1, chloroplastic; TrEMBL-Plants: tr|K7KB52|K7KB52_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0054200 LjG1.1_chr1 7649048 7649467 -
2 domain predictions
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LotjaGi1g1v0087600.1
n.a. Chaperone DnaJ; TAIR: AT5G02160.1 transmembrane protein; Swiss-Prot: sp|P47265|DNAJ_MYCGE Chaperone protein DnaJ; TrEMBL-Plants: tr|I3SFD1|I3SFD1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0087600 LjG1.1_chr1 12699556 12702860 +
2 domain predictions
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LotjaGi1g1v0140500.1
n.a. Chaperone protein DNAj, putative; TAIR: AT1G28210.1 DNAJ heat shock family protein; Swiss-Prot: sp|Q38813|DNAJ1_ARATH Chaperone protein dnaJ 1, mitochondrial; TrEMBL-Plants: tr|K7K9W1|K7K9W1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0140500 LjG1.1_chr1 23051807 23069361 +
2 domain predictions
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LotjaGi1g1v0140500.2
n.a. Chaperone protein DNAj, putative; TAIR: AT1G28210.2 DNAJ heat shock family protein; Swiss-Prot: sp|Q38813|DNAJ1_ARATH Chaperone protein dnaJ 1, mitochondrial; TrEMBL-Plants: tr|K7K9W1|K7K9W1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0140500 LjG1.1_chr1 23051826 23068758 +
2 domain predictions
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LotjaGi1g1v0140500.3
n.a. Chaperone protein DNAj, putative; TAIR: AT1G28210.1 DNAJ heat shock family protein; Swiss-Prot: sp|Q38813|DNAJ1_ARATH Chaperone protein dnaJ 1, mitochondrial; TrEMBL-Plants: tr|K7M7R2|K7M7R2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0140500 LjG1.1_chr1 23051839 23068667 +
2 domain predictions
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LotjaGi1g1v0375700.1
n.a. Chaperone protein dnaJ; TAIR: AT2G24860.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein; Swiss-Prot: sp|Q8GSJ6|LQY1_ARATH Protein disulfide-isomerase LQY1, chloroplastic; TrEMBL-Plants: tr|I1K8L3|I1K8L3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0375700 LjG1.1_chr1 85420401 85425639 -
2 domain predictions
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LotjaGi1g1v0384300.1
n.a. Chaperone DnaJ; TAIR: AT3G47650.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein; Swiss-Prot: sp|A6WX07|DNAJ_OCHA4 Chaperone protein DnaJ; TrEMBL-Plants: tr|I3SGK9|I3SGK9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0384300 LjG1.1_chr1 86769627 86772244 -
2 domain predictions
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LotjaGi1g1v0397500.1
n.a. chaperone protein dnaJ-like protein; TAIR: AT2G24395.1 chaperone protein dnaJ-like protein; Swiss-Prot: sp|Q9RDD7|DNAJ2_STRCO Chaperone protein DnaJ 2; TrEMBL-Plants: tr|V7AY57|V7AY57_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0397500 LjG1.1_chr1 88375074 88376880 +
2 domain predictions
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LotjaGi1g1v0648600.1
n.a. Chaperone protein DnaJ; TAIR: AT5G17840.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein; Swiss-Prot: sp|Q73Q15|DNAJ_TREDE Chaperone protein DnaJ; TrEMBL-Plants: tr|I3SWM8|I3SWM8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0648600 LjG1.1_chr1 120641024 120644897 +
2 domain predictions
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LotjaGi2g1v0114200.1
n.a. Chaperone protein dnaJ; TAIR: AT2G22360.1 DNAJ heat shock family protein; Swiss-Prot: sp|Q9SJZ7|DNJA6_ARATH Chaperone protein dnaJ A6, chloroplastic; TrEMBL-Plants: tr|I1KT02|I1KT02_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0114200 LjG1.1_chr2 42191565 42204252 +
2 domain predictions
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LotjaGi2g1v0114200.2
n.a. Chaperone protein dnaJ; TAIR: AT2G22360.1 DNAJ heat shock family protein; Swiss-Prot: sp|Q9SJZ7|DNJA6_ARATH Chaperone protein dnaJ A6, chloroplastic; TrEMBL-Plants: tr|I1KT02|I1KT02_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0114200 LjG1.1_chr2 42191685 42204262 +
2 domain predictions
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LotjaGi2g1v0114200.3
n.a. Chaperone protein dnaJ; TAIR: AT2G22360.1 DNAJ heat shock family protein; Swiss-Prot: sp|Q9SJZ7|DNJA6_ARATH Chaperone protein dnaJ A6, chloroplastic; TrEMBL-Plants: tr|I1KT02|I1KT02_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0114200 LjG1.1_chr2 42191738 42204193 +
2 domain predictions
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LotjaGi2g1v0193500.1
n.a. Chaperone protein dnaJ, putative; TAIR: AT5G22060.1 DNAJ homologue 2; Swiss-Prot: sp|P42825|DNAJ2_ARATH Chaperone protein dnaJ 2; TrEMBL-Plants: tr|A0A0D2PQJ2|A0A0D2PQJ2_GOSRA Uncharacterized protein; Found in the gene: LotjaGi2g1v0193500 LjG1.1_chr2 62598955 62600224 +
2 domain predictions
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LotjaGi2g1v0194000.1
n.a. Chaperone protein DnaJ; TAIR: AT3G17830.1 Molecular chaperone Hsp40/DnaJ family protein; Swiss-Prot: sp|Q8DKR7|DNAJ_THEEB Chaperone protein DnaJ; TrEMBL-Plants: tr|I1KJ68|I1KJ68_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0194000 LjG1.1_chr2 62704247 62711714 +
2 domain predictions
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LotjaGi2g1v0194000.2
n.a. Chaperone protein DnaJ; TAIR: AT3G17830.1 Molecular chaperone Hsp40/DnaJ family protein; Swiss-Prot: sp|Q8DKR7|DNAJ_THEEB Chaperone protein DnaJ; TrEMBL-Plants: tr|I1KJ68|I1KJ68_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0194000 LjG1.1_chr2 62704353 62711706 +
2 domain predictions
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LotjaGi3g1v0008000.1
n.a. Chaperone protein dnaJ; TAIR: AT1G80030.1 Molecular chaperone Hsp40/DnaJ family protein; Swiss-Prot: sp|Q8DKR7|DNAJ_THEEB Chaperone protein DnaJ; TrEMBL-Plants: tr|A0A0B2SH79|A0A0B2SH79_GLYSO Chaperone protein DnaJ; Found in the gene: LotjaGi3g1v0008000 LjG1.1_chr3 907883 914459 -
2 domain predictions
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LotjaGi3g1v0058000.1
n.a. Chaperone protein DNAj, putative; TAIR: AT5G48030.1 gametophytic factor 2; Swiss-Prot: sp|Q8GWW8|GFA2_ARATH Chaperone protein dnaJ GFA2, mitochondrial; TrEMBL-Plants: tr|A0A151RE69|A0A151RE69_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0058000 LjG1.1_chr3 6031817 6048589 +
2 domain predictions
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LotjaGi3g1v0063600.1
n.a. Chaperone protein dnaJ, putative; TAIR: AT5G22060.1 DNAJ homologue 2; Swiss-Prot: sp|P42825|DNAJ2_ARATH Chaperone protein dnaJ 2; TrEMBL-Plants: tr|I1JMV0|I1JMV0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0063600 LjG1.1_chr3 6734512 6739877 -
2 domain predictions
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LotjaGi3g1v0063600.2
n.a. Chaperone protein dnaJ, putative; TAIR: AT5G22060.1 DNAJ homologue 2; Swiss-Prot: sp|P42825|DNAJ2_ARATH Chaperone protein dnaJ 2; TrEMBL-Plants: tr|I1KJN5|I1KJN5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0063600 LjG1.1_chr3 6735850 6738702 -
2 domain predictions
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LotjaGi3g1v0063600.3
n.a. Chaperone protein dnaJ, putative; TAIR: AT5G22060.1 DNAJ homologue 2; Swiss-Prot: sp|P42825|DNAJ2_ARATH Chaperone protein dnaJ 2; TrEMBL-Plants: tr|I1JMV0|I1JMV0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0063600 LjG1.1_chr3 6735850 6738702 -
2 domain predictions
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LotjaGi3g1v0124500.1
n.a. Chaperone protein DNAj, putative; TAIR: AT5G48030.1 gametophytic factor 2; Swiss-Prot: sp|Q8GWW8|GFA2_ARATH Chaperone protein dnaJ GFA2, mitochondrial; TrEMBL-Plants: tr|A0A0L9UJX2|A0A0L9UJX2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0124500 LjG1.1_chr3 15238653 15250909 -
2 domain predictions
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LotjaGi3g1v0184100.1
n.a. Chaperone protein dnaJ, putative; TAIR: AT5G22060.1 DNAJ homologue 2; Swiss-Prot: sp|P43644|DNJH_ATRNU DnaJ protein homolog ANJ1; TrEMBL-Plants: tr|A0A0D2PQJ2|A0A0D2PQJ2_GOSRA Uncharacterized protein; Found in the gene: LotjaGi3g1v0184100 LjG1.1_chr3 25790039 25793534 +
2 domain predictions
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LotjaGi3g1v0184100.2
n.a. Chaperone protein dnaJ, putative; TAIR: AT5G22060.1 DNAJ homologue 2; Swiss-Prot: sp|P43644|DNJH_ATRNU DnaJ protein homolog ANJ1; TrEMBL-Plants: tr|A0A0D2PQJ2|A0A0D2PQJ2_GOSRA Uncharacterized protein; Found in the gene: LotjaGi3g1v0184100 LjG1.1_chr3 25790307 25792333 +
2 domain predictions
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LotjaGi3g1v0184100.3
n.a. Chaperone protein dnaJ, putative; TAIR: AT5G22060.1 DNAJ homologue 2; Swiss-Prot: sp|P43644|DNJH_ATRNU DnaJ protein homolog ANJ1; TrEMBL-Plants: tr|A0A0D2VJQ1|A0A0D2VJQ1_GOSRA Uncharacterized protein; Found in the gene: LotjaGi3g1v0184100 LjG1.1_chr3 25790307 25792333 +
2 domain predictions
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LotjaGi3g1v0470700.1
n.a. Chaperone protein dnaJ, putative; TAIR: AT5G22060.1 DNAJ homologue 2; Swiss-Prot: sp|Q04960|DNJH_CUCSA DnaJ protein homolog; TrEMBL-Plants: tr|A0A0D2PQJ2|A0A0D2PQJ2_GOSRA Uncharacterized protein; Found in the gene: LotjaGi3g1v0470700 LjG1.1_chr3 88617839 88621131 -
2 domain predictions
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LotjaGi3g1v0470700.2
n.a. Chaperone protein dnaJ, putative; TAIR: AT5G22060.1 DNAJ homologue 2; Swiss-Prot: sp|Q04960|DNJH_CUCSA DnaJ protein homolog; TrEMBL-Plants: tr|A0A151R8Y4|A0A151R8Y4_CAJCA DnaJ protein isogeny ANJ1; Found in the gene: LotjaGi3g1v0470700 LjG1.1_chr3 88618504 88620837 -
2 domain predictions
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LotjaGi3g1v0470700.3
n.a. Chaperone protein dnaJ, putative; TAIR: AT5G22060.1 DNAJ homologue 2; Swiss-Prot: sp|Q04960|DNJH_CUCSA DnaJ protein homolog; TrEMBL-Plants: tr|A0A151R8Y4|A0A151R8Y4_CAJCA DnaJ protein isogeny ANJ1; Found in the gene: LotjaGi3g1v0470700 LjG1.1_chr3 88618504 88620837 -
2 domain predictions
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LotjaGi3g1v0487500.1
n.a. Chaperone DnaJ; TAIR: AT3G45050.2 transmembrane protein; Swiss-Prot: sp|Q8DI39|UVRC_THEEB UvrABC system protein C; TrEMBL-Plants: tr|C6TFV3|C6TFV3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0487500 LjG1.1_chr3 90515193 90518240 +
2 domain predictions
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LotjaGi4g1v0268000.1
n.a. Chaperone protein DnaJ; TAIR: AT1G75125.1 plastid transcriptionally active protein; Swiss-Prot: sp|Q8C3L1|SSUH2_MOUSE Protein SSUH2 homolog; TrEMBL-Plants: tr|I3T872|I3T872_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0268000 LjG1.1_chr4 63327766 63329578 +
2 domain predictions
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LotjaGi4g1v0270500.2
n.a. Chaperone DnaJ; TAIR: AT3G47650.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein; Swiss-Prot: sp|Q5UP23|YR260_MIMIV DnaJ-like protein R260; TrEMBL-Plants: tr|I3T896|I3T896_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0270500 LjG1.1_chr4 63613791 63616756 +
2 domain predictions
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LotjaGi5g1v0006900.1
n.a. Chaperone protein dnaJ; TAIR: AT1G75690.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein; Swiss-Prot: sp|Q8GSJ6|LQY1_ARATH Protein disulfide-isomerase LQY1, chloroplastic; TrEMBL-Plants: tr|I3S1G6|I3S1G6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0006900 LjG1.1_chr5 1539779 1542594 +
2 domain predictions
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LotjaGi5g1v0006900.2
n.a. Chaperone protein dnaJ; TAIR: AT1G75690.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein; Swiss-Prot: sp|Q8GSJ6|LQY1_ARATH Protein disulfide-isomerase LQY1, chloroplastic; TrEMBL-Plants: tr|I3S1G6|I3S1G6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0006900 LjG1.1_chr5 1539848 1542623 +
2 domain predictions
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LotjaGi5g1v0163300.1
n.a. Chaperone protein dnaJ-like protein; TAIR: AT4G13670.1 plastid transcriptionally active 5; Swiss-Prot: sp|L7N653|CWLM_MYCTU N-acetylmuramoyl-L-alanine amidase CwlM; TrEMBL-Plants: tr|K7N4K1|K7N4K1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0163300 LjG1.1_chr5 41874751 41878759 +
2 domain predictions
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LotjaGi5g1v0361100.1
n.a. Chaperone protein dnaJ; TAIR: AT2G34860.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein; Swiss-Prot: sp|O64750|EDA3_ARATH Protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic; TrEMBL-Plants: tr|I3SKJ0|I3SKJ0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0361100 LjG1.1_chr5 67521940 67525015 -
2 domain predictions
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LotjaGi6g1v0093000_LC.1
n.a. Chaperone protein DnaJ; TAIR: AT2G22360.1 DNAJ heat shock family protein; Swiss-Prot: sp|Q9SJZ7|DNJA6_ARATH Chaperone protein dnaJ A6, chloroplastic; TrEMBL-Plants: tr|I1KT02|I1KT02_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0093000_LC LjG1.1_chr6 20030986 20031745 +
2 domain predictions
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LotjaGi6g1v0093400.1
n.a. Chaperone protein dnaJ; TAIR: AT2G22360.1 DNAJ heat shock family protein; Swiss-Prot: sp|Q9SJZ7|DNJA6_ARATH Chaperone protein dnaJ A6, chloroplastic; TrEMBL-Plants: tr|A0A151S382|A0A151S382_CAJCA Chaperone protein dnaJ; Found in the gene: LotjaGi6g1v0093400 LjG1.1_chr6 20109535 20117410 -
2 domain predictions
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