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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0396200 |
| Transcript ID | LotjaGi1g1v0396200.3 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | UAA transporter; TAIR: AT4G31600.1 UDP-N-acetylglucosamine (UAA) transporter family; Swiss-Prot: sp|Q54YK1|Y8631_DICDI Putative UDP-sugar transporter DDB_G0278631; TrEMBL-Plants: tr|G7J2T9|G7J2T9_MEDTR GDP-mannose transporter GONST3; Found in the gene: LotjaGi1g1v0396200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:88233084..88235932) extracted from Lotus japonicus Gifu genome v1.2.
TTAACATTTGAATTTGAATCACTAGATGTTGCTGTTATTAGCTATGATTCTGTTTGATCGCAGTTTGGTCGCGGCAGTGT CGTATGGAATCGCTTCAATGGCCATGGTTTTTATCAACAAGGCTGTTCTTATGCAATATGCACACTCAATGACTCTCCTC ACTTTGCAGGTGTTAATTGTTACTATGATGACCATTAATGATTACATATGGTGAATGTTGTTAATAACTGTATCTGTTTT TCTTAGCAATTGGCGACCGCGTTGCTTATACATTTTGGCCGGAGAATGGGATACACAAGAGCTAAAGGAGTGGATATTGC AACAGCTAAGCAGCTGCTTCCGGTTTCGATTTTCTATAACGCTAACGTTGCTTTTGCTTTGGCGAGTTTGAAAGGAGTTA ATATCCCAATGTATATTGCTATAAAGAGGCTTACACCGCTTGCTGTGCTTGTTGCTTGGTGTTTCTTAGGAAAGGGGAGG CCTACAACTCAGGTACTGGTTTTTTATAATGTTCTTATTCAGTTAATTTATTGTTAATGTCAAAACTTTTACTTACTTTG TCACTTTATCAAGATAGTTTATGTATGATAGTTTAATTTATTGATTAAGGGTGCACAAAGATCTAAGAGTGCTCTTAGAA AAAGCATTTATGGTCTTTGAAGAGGCAGAAGAACCATTGGCTATAGAATTTTATTGATCTTAGTACCATGGTACTGCAGC AACAAAACTTTGATCTTGTTGTGGAAATATTAATCCCAAATGGATTCTAAAATTGGAGATGAAACCTTTTATAACAGTGA ACAGGATCATTATGGTATGTTCATTTATCATACATTGGCATGGAGATCATATTAACCAAATATGTTGGTTTAATTCCAAA ATTCTTAAATATCATTCGATTAGCCTTGTGTGCCTACTGCCTGATATGATGATTGGTTGTGTTTTATTCTTTCCCTCTCT TAAGCTGAGAAAGAGGATTTTGATATTTGATTTTCTGTCGTTTGCTTTTATTCTCATCAATTTTGTGTAAAACAGCCATT GTAGTATCTCAATGTAAATATAAATGTATTTAATGCATTGACTGAACTGCTGAAGTTTTGAATTGGCTACCAATTTTGGT AGTGTTTACACTCAATACGACATTCTATACATTTCTGTCAAATTTCAGGTGACTCTTTCAGTGATACTGATTGCTGCTGG AGTTCTCATAGCAGCCCTTGGAGATTTTTCCTTTGACCTTCTTGGGTATAGCATGGCCTTCATTTCTGTTTTTTTCCAGG TGATATGCTGATATTTCATTATCCATACTCTTATAATGGAGTAATGGCTCTGTAATTTTGCGCCGGTGCATGCTCTTCTC ATCGTGTTGCCTACTCACCTACGCAGACCATGTACCTTGTGCTAGTGGAAAAATCTGGTGCTGAGAATGGTCTTTCATCA GTGGAAATCATGTTTTACAACAGCTTTTTATCTCTTCCATTTTTGATGTTTCTTATCATAGCAACCGGGGAATTCCCAAA TTCTTTATCCATATTATTTGCAAAGGTCAGAATCTTCATGATTAAGCTACCATAGATTTAATATTTCAGACATTTGGCAT CTTTTGTCTTTCATTCTAGAAAGTCCGATAAATTCAATGATTTCAATAGGAACTGCTGAAATGTCAAAAATAGCCTGATC TAGTTACTATAAGTTTATTTCCAACAGTAAATGATGTTCAGCACTTGTTGATTTCCTTGCAAATTGACTTTCTAAGTTAA TGGACAATTCAAGAAGAATTACATCAGAACCAGCCTTCCCTTCCTCAGTCTGTTAATGTCCATTGAGAAGTTTCATACCA ATTTCTAATTATTTGTTCACTCTAGATGCTAGAATATTGCTAGAGCCCAGAAGGTTCATTTCTCTCAAAGCTATCCCTAT TCCTTACTTGAAAGGATTTGTGGAGAATCTGAGTTTGTTGGGATTGGGATTAGGCTAGACGGCTGAGGCTGAGATCACTT TATGTAAGGTGGGTGGGAGCCACTTATATTTTGGCGGAATAAGCTCAGGGGACGTTTACAGTAATAAAACACTTGTCTGT TTATAATATGCTTTATAAATACAAGTTAAATTAACAGATTAGTTGACTCAGTTTCTTTAGTTCTTCTAAATTAAAGTCCT GGCAAAGTAATTTCTCTAGTGGAAGTAAATGAAGGATCATAGCAACTTAGTTGTGATGGTTGACAAGTGAATCCATAGCT CGCAACATATTTTTTATAGGCAACACGTTTGCATATATTTGATGCTACCGCATCGCGGGGTCATGTATTATGTAATGATA TATTGGTGTGAAATGAAGGCTATTATCTAACGTGAAGTTGATTTTCTTTGCAGAGTTATTCAGTTTCATTTTTGGCGATC CTTATTCTTTCATTGGTTATGGGCATCGTTCTCAACTACACCATGTTCTTGTGCACTGTTGTTAATTCTGCTCTAACTAC AACTATTGTTGGCGTTCTCAAAGGGGTTGGTTCCACGGTAAGCTAGATCCTGTGTTTGCCATAGATTTTTCTGACGCAGA ACAAAAATTTGAATTAAAATTGATTCATATACAATATTCATCCATCTTTTCTAAATGTTTTATTTGACTTGATTTATTTC TAGTTTTAGCTGCAATCATGATCTGTATCTTTTTGCTTCTTCAGACTCTTGGTTTTGTCTTACTGGATGGTGTTCAAGTC CATGCTCTGAATGTGTCTGGATTGGTTATCAATACTGCTGGTGGTGTTTGGTATTCATATGCTAAATATCAGCAGAAAAT GAGTAAGACAGTGAAGCTAGTTACAGACGTGGAGGCTCATCGCACATAG
CDS sequence (LotjaGi1g1v0396200.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGCTGTTATTAGCTATGATTCTGTTTGATCGCAGTTTGGTCGCGGCAGTGTCGTATGGAATCGCTTCAATGGCCAT GGTTTTTATCAACAAGGCTGTTCTTATGCAATATGCACACTCAATGACTCTCCTCACTTTGCAGCAATTGGCGACCGCGT TGCTTATACATTTTGGCCGGAGAATGGGATACACAAGAGCTAAAGGAGTGGATATTGCAACAGCTAAGCAGCTGCTTCCG GTTTCGATTTTCTATAACGCTAACGTTGCTTTTGCTTTGGCGAGTTTGAAAGGAGTTAATATCCCAATGTATATTGCTAT AAAGAGGCTTACACCGCTTGCTGTGCTTGTTGCTTGGTGTTTCTTAGGAAAGGGGAGGCCTACAACTCAGGTGACTCTTT CAGTGATACTGATTGCTGCTGGAGTTCTCATAGCAGCCCTTGGAGATTTTTCCTTTGACCTTCTTGGGTATAGCATGGCC TTCATTTCTGTTTTTTTCCAGACCATGTACCTTGTGCTAGTGGAAAAATCTGGTGCTGAGAATGGTCTTTCATCAGTGGA AATCATGTTTTACAACAGCTTTTTATCTCTTCCATTTTTGATGTTTCTTATCATAGCAACCGGGGAATTCCCAAATTCTT TATCCATATTATTTGCAAAGAGTTATTCAGTTTCATTTTTGGCGATCCTTATTCTTTCATTGGTTATGGGCATCGTTCTC AACTACACCATGTTCTTGTGCACTGTTGTTAATTCTGCTCTAACTACAACTATTGTTGGCGTTCTCAAAGGGGTTGGTTC CACGACTCTTGGTTTTGTCTTACTGGATGGTGTTCAAGTCCATGCTCTGAATGTGTCTGGATTGGTTATCAATACTGCTG GTGGTGTTTGGTATTCATATGCTAAATATCAGCAGAAAATGAGTAAGACAGTGAAGCTAGTTACAGACGTGGAGGCTCAT CGCACATAG
Protein sequence (LotjaGi1g1v0396200.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLLLLAMILFDRSLVAAVSYGIASMAMVFINKAVLMQYAHSMTLLTLQQLATALLIHFGRRMGYTRAKGVDIATAKQLLP VSIFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAWCFLGKGRPTTQVTLSVILIAAGVLIAALGDFSFDLLGYSMA FISVFFQTMYLVLVEKSGAENGLSSVEIMFYNSFLSLPFLMFLIIATGEFPNSLSILFAKSYSVSFLAILILSLVMGIVL NYTMFLCTVVNSALTTTIVGVLKGVGSTTLGFVLLDGVQVHALNVSGLVINTAGGVWYSYAKYQQKMSKTVKLVTDVEAH RT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 17 | 17 | - | – | |
| Phobius | 1 | 1 | 1 | - | – | |
| SignalP_EUK | 1 | 17 | 17 | - | – | |
| Phobius | 2 | 10 | 9 | - | – | |
| Phobius | 11 | 17 | 7 | - | – | |
| TMHMM | 13 | 30 | 18 | - | – | |
| Phobius | 18 | 40 | 23 | - | – | |
| Pfam | 23 | 299 | 277 | 4.3E-15 | ||
| PANTHER | 26 | 309 | 284 | 3.4E-96 | – | |
| PANTHER | 26 | 309 | 284 | 3.4E-96 | – | |
| TMHMM | 35 | 57 | 23 | - | – | |
| Phobius | 41 | 58 | 18 | - | – | |
| Phobius | 59 | 77 | 19 | - | – | |
| TMHMM | 78 | 96 | 19 | - | – | |
| Phobius | 78 | 95 | 18 | - | – | |
| Phobius | 96 | 100 | 5 | - | – | |
| TMHMM | 101 | 123 | 23 | - | – | |
| Phobius | 101 | 122 | 22 | - | – | |
| Phobius | 123 | 130 | 8 | - | – | |
| TMHMM | 130 | 147 | 18 | - | – | |
| Phobius | 131 | 148 | 18 | - | – | |
| Phobius | 149 | 153 | 5 | - | – | |
| TMHMM | 152 | 174 | 23 | - | – | |
| Phobius | 154 | 174 | 21 | - | – | |
| Phobius | 175 | 185 | 11 | - | – | |
| Phobius | 186 | 206 | 21 | - | – | |
| TMHMM | 186 | 208 | 23 | - | – | |
| Phobius | 207 | 225 | 19 | - | – | |
| TMHMM | 223 | 245 | 23 | - | – | |
| Phobius | 226 | 246 | 21 | - | – | |
| Phobius | 247 | 252 | 6 | - | – | |
| TMHMM | 252 | 274 | 23 | - | – | |
| Phobius | 253 | 275 | 23 | - | – | |
| Phobius | 276 | 280 | 5 | - | – | |
| TMHMM | 278 | 300 | 23 | - | – | |
| Phobius | 281 | 300 | 20 | - | – | |
| Phobius | 301 | 322 | 22 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0396200.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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