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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0398400 |
| Transcript ID | LotjaGi1g1v0398400.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein kinase; TAIR: AT4G32660.1 Protein kinase superfamily protein; Swiss-Prot: sp|P51568|AFC3_ARATH Serine/threonine-protein kinase AFC3; TrEMBL-Plants: tr|I1K979|I1K979_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0398400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:88490627..88492377) extracted from Lotus japonicus Gifu genome v1.2.
TATTCAGATATGCATGAACTACACCTAATCCACACAGACCTGAAGCCAGAAAATATACTTCTTGTTTCTTCTGAATATGT AAAGCTCCCTAGTCGCAAGGTAGCTAGCATTTTTGAAGTAATGACATAGACTCTAATGATGTATTTAAGTAAAATGATTT GATTGGTACAGAGGCTTTCCTCAGATGAAACACAATTCAGGTGCTTGCCCAAATCTAGTGCTATTAAGCTGATTGATTTT GGTAGTACTGCATGTGATAATCAGAACCATAGCTCCATTGTTTCTACAAGGCATTACAGAGCCCCGGAGATTATTTTAGG TAACTAGATATTGTTTTTGTTGGTGAGAATGTGTTGCTTTACTTGTTTGTCTATTGCTCTGTTGAGTGTAAATGTGGAAC TCTGAAACCCTGTGACCCATTAAAAATTTCGTCAATACCTTACATCACATCTCTTGTTAAATCTTCCAGGATTATTTACC ATCTTCTTTTGACTTTGTATGATCCTGGATTTTATGTTCAAGATATTGGTTGTTGTGACTTCTGAGCCCTTTGTAGGGTA GTAATTGCCATTTTTCTTATTCAGATTGTATTCCCCCCTTATAATGCATGCCTTGCTAGTAATCTTCCTGTACACTTTCT TTGGTGATCTTTTGTTTGTTTTCTCATGTTAATGTTAAGAGGCCAAAAACAAACCAGAGGTGCCAAATCTATGACATGTA ATGGTGCCATTTGGGAGACTGCATTATGTGGATTTAGTGCATGTTTGGATGCACGGTGAAAAAAAAAATCATGGTGGACA GAAGTAAAAGATAAGGGAAGTTGCTTCTATCCACCATGATTTTGGCTCACCGTGGTTTTGTACCATGTATACAAACATGC ACTTAGTCTTGACTAAATGAAATTATTAGGATTGTAATAGTTAATGCAATGCTCTCACCTGTATCTGAAATGATAATTGC AGGTCTAGGGTGGTCATACCCATGTGATTTGTGGAGTATTGGATGTATCCTCATTGAACTATGCACGGTTGGTCCTCCAG CTAACAAGATACATTAGGCATGGTCAGAATCTGGAACAGCTAGCCTTAATGTTTTAAATGTGGAACTTTTGCAGGGTGAA GCGTTGTTCCAGACTCATGAAAACTTAGAGCATCTGGCAATGATGGAGAGAGTCCTGGGACCTCTACCAGAGCACATGGT TCGAAGATCTAAGTAAGTAATAGATTTATTGAATGCTCTCTAAATTTGTCTTTCCAATACACAAAATTGGTTTGAGATCT ATAGTGAGTCTTCCTAGTTATGAATCATCTACTGGGAATAGCCAAGAGCTGACTAATTTTAATTGAGCATACGATATTTA TGTAGTGACATATTTTCCACTTGCTTGACATTATGTAGTAGGGGTGCAGAAAAGTATTTCAAGCGTGGATCCCGACTAAA ATGGCCTGAAGGAGCTGTTTCAAGGGAGAGCATAAATGCTGTGAAGAGGCTTGGCCATCTTAAGGTTTGTTGAGTTCCCT CTTATCAATCAGGAGTTGCTGGGTAGAATCTTCAATCAATCAATGTTTTCTTTGGGGTTTTTAAATTATAGTGACCAATT GTTCTTCATGCAGGATATTGTATCACGTCATGTAGATTCGTCCAGGTTTTTGTTAACTGACTTGTTGCATGGCTTATTAA CATATGATCCCACAGAACGTCTAACTGCTCGCCAAGCCCTTGATCATCCCTTCTTTAGGGATCCAACTTAA
CDS sequence (LotjaGi1g1v0398400.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCATGAACTACACCTAATCCACACAGACCTGAAGCCAGAAAATATACTTCTTGTTTCTTCTGAATATGTAAAGCTCCC TAGTCGCAAGAGGCTTTCCTCAGATGAAACACAATTCAGGTGCTTGCCCAAATCTAGTGCTATTAAGCTGATTGATTTTG GTAGTACTGCATGTGATAATCAGAACCATAGCTCCATTGTTTCTACAAGGCATTACAGAGCCCCGGAGATTATTTTAGGT CTAGGGTGGTCATACCCATGTGATTTGTGGAGTATTGGATGTATCCTCATTGAACTATGCACGGGTGAAGCGTTGTTCCA GACTCATGAAAACTTAGAGCATCTGGCAATGATGGAGAGAGTCCTGGGACCTCTACCAGAGCACATGGTTCGAAGATCTA ATAGGGGTGCAGAAAAGTATTTCAAGCGTGGATCCCGACTAAAATGGCCTGAAGGAGCTGTTTCAAGGGAGAGCATAAAT GCTGTGAAGAGGCTTGGCCATCTTAAGGATATTGTATCACGTCATGTAGATTCGTCCAGGTTTTTGTTAACTGACTTGTT GCATGGCTTATTAACATATGATCCCACAGAACGTCTAACTGCTCGCCAAGCCCTTGATCATCCCTTCTTTAGGGATCCAA CTTAA
Protein sequence (LotjaGi1g1v0398400.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MHELHLIHTDLKPENILLVSSEYVKLPSRKRLSSDETQFRCLPKSSAIKLIDFGSTACDNQNHSSIVSTRHYRAPEIILG LGWSYPCDLWSIGCILIELCTGEALFQTHENLEHLAMMERVLGPLPEHMVRRSNRGAEKYFKRGSRLKWPEGAVSRESIN AVKRLGHLKDIVSRHVDSSRFLLTDLLHGLLTYDPTERLTARQALDHPFFRDPT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 211 | 211 | 6.1E-108 | – | |
| PANTHER | 1 | 211 | 211 | 6.1E-108 | – | |
| Gene3D | 1 | 209 | 209 | 1.6E-63 | – | |
| SMART | 1 | 210 | 210 | 1.3E-9 | ||
| ProSiteProfiles | 1 | 210 | 210 | 25.997 | ||
| Pfam | 1 | 210 | 210 | 8.9E-31 | ||
| SUPERFAMILY | 1 | 212 | 212 | 5.74E-44 | ||
| ProSitePatterns | 6 | 18 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0398400.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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