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LotjaGi1g1v0398700.1

Overview

Field Value
Gene ID LotjaGi1g1v0398700
Transcript ID LotjaGi1g1v0398700.1
Lotus japonicus genome version Gifu v1.2
Description Hemoglobin-like protein; TAIR: AT4G32690.1 hemoglobin 3; Swiss-Prot: sp|Q67XG0|GLB3_ARATH Two-on-two hemoglobin-3; TrEMBL-Plants: tr|A0A0L9TDT4|A0A0L9TDT4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0398700
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:88532496..88538077) extracted from Lotus japonicus Gifu genome v1.2.

CTTTCTTTTTTAATTCCCACTTATTCTTAGCTCATAACCAATAGATGATGATATTGGATCATGTATAATAAGACCGTGCA ATCCACGCTAACCCACAAACTCTGTATATGCTCTCTGCTTTGCAAAACAAACTTCAAAGATGCAGAGTCTTCAACACAAG GCCTCTGAATGGAGTGGAGTTCTCACATCCAACGCTTTCGCCATCGATGACACCAATCTTTTTGAAAAGCTCGGCCTTCA AACCTTCATCAGCCTCTCTACCAATTTCTACAACAGGTCCCATGTGTTTCTTTTCTTAACTTTGATTGTTGTATCATTGT ATACCCTGCATCTAATTGAGATTTTAAATCATCTATTTGTTTTTGTTTTGTTATTGATTCTTGACAATTTGAGTTGAGGT ATAGGGTGTATGATGATGAGGAAGAGTGGTTTCATTTAATATTTGCGAATTCTGACAAGCAAATAGCAATTCAAAACCAG TATGAGTTCTTGGTGCAGAGAATGGGAGGCCCTCCCCTGTATTCTCAGAGAAGAGGTGATCGAGCTTACACACTTGTAAA TTTTTCAGTCAAAATTAGATTTATGGAAATTAAATTAAATTAAATCTTAGGCGCAAAAAAACGACAAATAGGATCCATTG ATATTCGGTCGTTGTCGCTTTAATTCGTCTGATGTTATGTTTGGTTATGTTTTTGGTTCACAAAATTTAGAAAAGAAATT AGAAATAGGATCACAAAATTTAGAAATTAAATTAAACATTTGGTTATGTTTCTGGATATGATAGGGCATCCTGCACTAAT TGCTCGACATCGAGCATTTCCGGTGACACATGAAGCTGCAGAGAGGTGGTTACATCACATGCAACAAGCAGTGGACACTA GTTCAGATATAGATGATGACTCCAAGATCAAATTGATGAATTTCTTCAGGTTCATTTTCCTCCTTAATTATTGGATTCAT GATAATAAACGTTCATATATAACAATTAACAACCTTGCTTTTCAGGCACACTGCATATTTTATTGTGGCCGGGATTGAGC TCAAGAATCAAAACTTTCAGATGCCATGCAAGAATGCACCCAGTCCATGTAAAAACTTCTAGCATTATTGAATGATAGCA AAGAAGAATGAGAAAATAATTGTTTAAATGCACTATAAATTTGATGACCAACAAAAATATTTGTTAACAAATAAACTACC ACTGTTCACGGTTATGCTTCAGTTTTCTTTTACCGGTTTTGCATGGTCATCTCTTTCTTAGAAACTTTATGGCGAAGTAC ATCTAAAATTGTTCCAAACTTCTGAAATACATTACTTTCTTAATGAATTACTTTCTCAAGGTTAAAAACTTCAAAAATAT TTCATTGATCTTCTCATCTTCAGCTTGTTCTACTTTTTCCTCTATACACATTAACCAAACAACTTAGACTACTTGCAATG AGGTAGTTAAATGGGTGTTGAATGACTCCAATGGGATGTTGAAAATAGTGTTCAATGTTAAACATGTTGAATAAATTCAA AATGTTGAATGAATAGTGATTTGGTCTCACTCAGTACACATGGCAAAATCTCATTAGTTGTTGTAATTTCCAGATTCTTA TCTCATCCTAATTATTTGGGGTCAATTATTTCATAGTAAATTAATTTTTTATTTAATTTTTTTTCACCAAAATTCATCAT TTTTTTGTCTATAAATAGAGACTTGGTTCATTTGATTTGGACACAGAAAAAAAAACGACATTTTTCCCTCTTGTTTTTCT ATTTAGCCTCCAATAAACTCTTGTTTTAATTAGTGTATTGTATTGCATTTTAAGTTTTTTGTAATTTCACTTGTTTTAAT AATGACTATCCCTATATGTCATCTTTTTTGACTTGCAAGAAAAAATTAATTAAGAATATAAAATTACTAAACTAGAAAGA AAAAAAAAGTAACTCTAAATTATTTTAATTTAATTTAAATCGATAATTGTTATTAATATATAATCACAAAAACAAAAAAC ATAAAAGAAAGTAAAGAATATGAAATAAAAGTGGTGGGGTAGGGTGTTGAATTTTATTAAACAAAACCATTGTAGTGAGT AAAAGTTGAATGAGTGTTGAATTATTAGGTAAAAGAGAGAGAAGATGAGGTGGAGTGTAAAAAGTGAAAAAGTAGGGTGT TGAATGGATTCAACCATTGTACGTAGTCTTAGACGATTTAAGTTTAACTATATCTGATATTCAATTTAGATGAGAAGAAA CTAACCCTGTATCAGATCTCATAGGTCTTGATTCCAACTAGTCAAGCAAGTGGATCTTAGAAAAAATTGAGGAAATAATA GAACCTACAAAACCTGCTTAAAACCATAGCAAATGGAGATGAAACTCTATATTAACCTGCATTATGGAGTCGGTTGTGTA AGCCTATAAATAGGCAATCCCGCAATGTATCTAATTGAGCAGCAAACTTAGTTTGCTACCTTCTACCAACTCGAATCATC TTCATCTAATAAACCACTTTTTATATCAATGCATCTAGAGCCACACAGCTCATTTCCAGTTTATATCCTTTCTAACTATT TTAAATTCTAACACTCTAGAATATACCATATCTTCATTAGTGCCTATAAGCAAAACTAGTATAATACAAAAGAAACAAAA TCGCTGTTACTAATTAAATTAAATATCAGGATTAACTTAAATTCATATTCCACTCTGTATAAATTAAACAAAGACCAAAC AGAACTTGGAAGGTACAGAAATGGGAGCAAGACAAATGTCTGTTCAGGAAAAGGTCCTACACTCCTAGAACAAGCTAGCT TTGGGGTGTGGGTGTGTGTGTCTTCTTAATTTAGGGGTTTACCACAGTAGTTTTTTACCTTTTAAAAGGAGTACGTTAGC AAGTTAAAACTATAAATTGCTAATATATATATAATATATTCAAAAGTGTGGACTGCTAATGTGCTCGTTCTAAAAACCAA ATGGGAGATGTTATACAAGCTATTTCATTCATATAAGCTTTATCTGATTCTTACCTATAGCACTAGCACATAACCCTAAC AATTCAGTAGTCCAATTTCTCAAATTTTGGTGTGCAACAAGGGTATCCCTCAGCCAACAAAGAGAGATTGATCCATTTCA AGTCATGAAGACCAGTGAAGTGGACTTCCCAACAAAGCCTACCAATATTCTATATACTCAAATTAGGCAAACGCACAAAA AAATAAATCAAGATACTAAGAGTGAAAGATGAACTTTTTCCTTAGCTATTAAAAGTGAAGGACAGACTAACATGATTTTT AATTCCTTAGCAGAAACGGTCAATCTCCTCGATAAGGTCTAGCACGGCCTCCCGGTAGTCATACTCCGAGGATTGGTCGA TGGATGACTGCGGAGGAGGGGATTGGACGGGGGTTGGGAGGGATGCGAAGGTTCTGAGCCGGAAAGCTCTGACCTCCGAT ACGTCGAGGGGAACTCCGCCGGGCTCGGAGGGTTCTTCTTAGCATCGGGGTGACGCCGGAGTAGGGTTCCGGGGGGGATT TCTGGTGCGACGCTTAGGAGACATGATGAAGAAGGTAGTGGGAAACTGAAAAATTTGAAAAACTAAATGCAGAGGACGGG GAAAAGGGACTCACCGGGAAACAAAGTGAACAGAGGGTAGAGGTAAGGATAGATTGCAACGACGCTGGAACGGTGGCTTG CCGGAGGTTTGCAGGAAGAGATTAGAGATGAGAGAAGTGGAGGTTTGGAAAGTGGTAAATGATGAAGGTAGAGGGTTTTT ATAGGCACGGGGTGACTGTTGGCATGGGGCGCGTGCGGTTCGCATGGGGATGATGAAAGGGCAGGCCTCATGATGACGGT GCAATGATGGTCTCGAGTGGATGCGACGTGTTGGAGAAAGCGAACAACGCATTTAAGGCAAGATGTAGGATTTGATTGGC CCGAGTCCTATGATTTGGCCTTTAATGTGACTTGATGTGACGATTCGAAAAGGGTTCTTGATATTTCAAAGATACGCTGA CTCTTTAATTTCTCTCTCATCGCTGATTCATTGAGGCGACCAAACTCACCACAATCGCCGGTTAATGATGGCGGCCAAGG GCACGTGGAGTTGTAGATACATAGGCATGTGGACTCGTCGACTTGCGACTTGAAGGCGCTTGCCCTATATCTTCTCGCGC CCGTGACCCAAGATATCTTTTTACCTGTGGACTTGTGGGTTGAGGACGCTCGGTCTTTATTTTCTCACGCCATGTTGGCG ACTTAGATTTCTACATACATGATGAATAAGTGTTAGGCAGTTGTAGTTTTTCTTAATGACACACTTAGCTCTCATACTTC GAGCTCGGTGTCTTGTGGAATTGTGGACTAGGCGAACCCTTAGAGGGGCAACGCCCAGGGTCCTGCCCGCCTCGTGGAGG GTCCCTAGGCCAGTAGGTTGGACCTCGTTCAGCTAGGCCCATTAAGGACATTCGCACACGGAGGCCTAACCCCGCCTCGA TAAATAGGTAGTGGTTACCAATTGTAAGAGACTTTTGCTCATTTAATCAATAGCAAATAGGGGTATAAATCCATAGGAAA TCCTTTATAAAAATCTGCAGGAAAAAATTGTATGTATATGTGGGACGGTAGGATCTAAAATAAATTTGAAGGAAAATTCA CATAAATAAAACGGCAGGAATATTCAAGGAAAAAATCTGCAGGTAAATCCAAAGATACCATTTATTGCTGATTTTCTTGT GGCTTTTTAATACAAAAGAGATTACTTGTTAATTTTCCTGTAGATACTTTCTGCAAATATTTTTTGAGAAAAAGTTCATA GGAAATTTTAACATTTCTTACGATTTTTCTTTCACATTTAAAATTCGCAGGAAAAACGTATATTCTGTAGGAAAATCTAT AAGAATTTCTATGGAAAAAATCCGCAGGAAAAATCGGAAGGAATTTAGCATTTTTTTAGTAGTGAGCGTTTCAGTTACAG TATCCCTTGTCAACCATGGCAAACCATGGCCATCAAGCTCCACGCCCCCAGCTGCCCCTGCCATTTGTTCGCACCCGGGG TGTAACAATCCCCGGTTTCAGGGAAAGCCATATTGTCAAGAACACGACCCGCACCTGCAGAAATCTGCACGCCCCTAGCT GGCTAACATGCCAGCCGCACTTGTATCAGGCAGCTGTGGTTTGCACCCAGAGGGGGTGCAGACGTTACTGTGTATTGCTC TGATTATCGTTGTACCCACTCACCGCGTTGTAACACCCTGCGCCAGGACCCTCAACAATTCTGCCTCTATCACCGTGAGC TAGAGAAGCAGCATGTTGCTGCCCGTCGAGCTAGAGAGGTCGCAGAGATCTTGCTGGAGATGGCGGGTCTTGCACGCTCA TTGAACTTAGGATTTTGATGTTTTTTTAGTTCTATTTTTCTTTTGCTGATATTGAGCAAAACTATTTTTTTTGCTGGCAT TGAGCAAACTCTCACATAACACGGATTACAATATTTGTAGTTGGCTTTGCTTGAATTTGTTTTTAGTTCAGATGATGTGC CCTTTGATGAGGATTAATATTGTTTGGATATTAATGAAAGTGATGTGGTTCTTGCAACTAAA
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0398700.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCAGAGTCTTCAACACAAGGCCTCTGAATGGAGTGGAGTTCTCACATCCAACGCTTTCGCCATCGATGACACCAATCT TTTTGAAAAGCTCGGCCTTCAAACCTTCATCAGCCTCTCTACCAATTTCTACAACAGGGTGTATGATGATGAGGAAGAGT GGTTTCATTTAATATTTGCGAATTCTGACAAGCAAATAGCAATTCAAAACCAGTATGAGTTCTTGGTGCAGAGAATGGGA GGCCCTCCCCTGTATTCTCAGAGAAGAGGGCATCCTGCACTAATTGCTCGACATCGAGCATTTCCGGTGACACATGAAGC TGCAGAGAGGTGGTTACATCACATGCAACAAGCAGTGGACACTAGTTCAGATATAGATGATGACTCCAAGATCAAATTGA TGAATTTCTTCAGGCACACTGCATATTTTATTGTGGCCGGGATTGAGCTCAAGAATCAAAACTTTCAGATGCCATGCAAG AATGCACCCAGTCCATGTAAAAACTTCTAG
Download CDS Sequence

Protein sequence (LotjaGi1g1v0398700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MQSLQHKASEWSGVLTSNAFAIDDTNLFEKLGLQTFISLSTNFYNRVYDDEEEWFHLIFANSDKQIAIQNQYEFLVQRMG GPPLYSQRRGHPALIARHRAFPVTHEAAERWLHHMQQAVDTSSDIDDDSKIKLMNFFRHTAYFIVAGIELKNQNFQMPCK NAPSPCKNF
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR47366
1 164 164 8.9E-92 –
Gene3D
G3DSA:1.10.490.10
1 151 151 1.5E-48
IPR012292
Pfam
PF01152
26 142 117 1.4E-41
IPR001486
SUPERFAMILY
SSF46458
26 145 120 4.8E-26
IPR009050
CDD
cd08917
28 146 119 1.76796E-54 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0019825
Molecular function Oxygen binding Interacting selectively and non-covalently with oxygen (O2).
Subterm of
GO:0020037
Molecular function Heme binding Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0398700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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