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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0401200 |
| Transcript ID | LotjaGi1g1v0401200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | TOM1-like protein 2; TAIR: AT4G32760.1 ENTH/VHS/GAT family protein; Swiss-Prot: sp|Q68FJ8|TM1L2_XENLA TOM1-like protein 2; TrEMBL-Plants: tr|A0A0B2PRM5|A0A0B2PRM5_GLYSO TOM1-like protein 2; Found in the gene: LotjaGi1g1v0401200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:88926102..88932667) extracted from Lotus japonicus Gifu genome v1.2.
GAGATATTGAGATGAGATGAGATTGAGATATTGAGATGAGATGAGATATTGAGATTCTACCCTTTCAATTTTTCTTCCTC AACGGAATTCAATTTAGCATCTTCGTGGTGGAAAGAGAGAGAGAGAGAGACAGATAGAGAGAGAGAGAGAGAGAGAGAGA CCGTTACTTTTCATCTCATCTCTGCTGTATCGCCGGAATTGCAGTTCGATCTCGCCGGAAAACTACCGATCCTCTCGTCG CCGCCGAGCAGCGATGGTGAATCCCTTGGTGGAGCGTGCCACAAGCGACATGCTCATCGGTCCTGACTGGGCTTTGAACA TCGAGATCTGTGATATACTCAATCGTGACCCTGCGTATGCATTCATTCTACCTTCCAATTCTCCATTCTCTTTACCTCTA ATCATGTGCAATTTCTTCATCTTCCTTTCCGTTTGGTATTTCGATCGAATAGTTCTCTGGTTTTCACTTTTTCTGGCAAA AATATGAACAAAATTCAACGGCTGAGGTTTTTGGTTTTGATGCTATGTTATGAATGAATTCTGATTTTGAGTTATAGAGT GGAATTAGTGTCTATAGCTGAATATTGCTCTTCGATGTTGTGATTTTACTTTTGCATAGCCAATTGAAGTAAAAGCAAAA ACTAGGAATGAGAAATCTCGAGCTGGGTTCAGAGTTGGATTGGACCTTGGTTTCACTCTTTGACTTGGTGATCGGGGGTT CAGTAATGGTTTACAACAGTGTTGTCAAACAGCGGCGCTATAGCGTAGCGCTCTGAGGGCTCACTGCTATTCGCTATTTG GAGTTATTTACCACTTTGAGGGCTTGACATAATCGATTTTTAGCTTTCCGTTATTTTCCGTGATCTGATTAACAACACTG GTTTACAAGGATTATTTGATTAGTTAGAGAATAGGTATAGTGGATGGCTATTATGGATTCTGCAAATTTGCCCCTTCAGT GGCCACTTTAACTTTCAAGTGGGAGTAGATTTTCTCGAATAAAATTTACACATGACATGTCATATAATAGTTTAGTCTAT CTCTTTCGTTATCATAGTCGTAAACTTTGATGAAGCTCTATTTAGTGGATGCTTGGAAATTCTTTTACAATTGATTTGAG CGAGAATCAATTGTGGGGAGAAACTTCTGCGCGCTGGTTTCAGAATCGATTGTGAGGCAATAGAATAAACGTGCTATTAT TTGTTGCTTAGGAAGAGCTAGACACCATTTTGACATAGTCCTTACATAGTCATCTTAGAAGATTCATTCTCGTCGCGAGT TCCCTTTTATTATGGAACATCATGGCCTTCTAGGAACTAATGGTTCTGTGTTTGTGCCCATTCAATCATGTTATGAAATT TTTAAAACCCATATTGTTTATATCTTTTGCTATTGGGAGAAGTGGGTGGTGTATCTCAATGAATATAGATTTGGAACTGG TTTTCTCTCTCTTTTCTAATGAATATAAATGTTTAACTGGAATTTTATGTATAATTTTGGATTTTTGCTTCTTGGTTTGT ACTTCCAGAGTTTGAGAATTCGGTTTGGTTATTTATTTCAGGCAATCAAAGGATGTTGTTAAAGGCTTAAAGAAGCGGAT TGGAAGTAGAAGTTCTAAAGTTCAACTTCTTGCACTAACTGTAAGCTCAGATACTTCATTGTAAACTTTTTCAACTCAGT TCTTAAAATTGTTCAAGCTGCTTTTTTATTTAAGGTTTCTCTCCGTTTAAATAAAATGGACATTCCACTTAAAATTATCA TAAATATGGAGAGACATTGATTTCCGTTGCAATTCATAGGCTATATGTGGTTGAGTTGAAGGGGGTTGCATCATTTTGTT AGATTTAAATTGCAAGCAATAAAAACCACCAAATTTGATTAAAACTGCAATTTCTGTGCTATGTTGTCTTAGTGTTAGGG TTTGTCTCAAGATACCTTGTAGCTGTTTAAATTAGGTTTGTTTGGATAAGGTAGTAAGAACTCTAGTTTGGATATAATGA ACATTTCTGTATCATCTTTAACAATTAGAAAAGCTGATTTGTTTTTTAATTGGTTGGGTATATTCTAGCTTCTTGAGACA ATCATAAAGAATTGTGGGGACATTGTCCACATGCATGTTGCAGAGAGAGATGTTCTTCATGAGATGGTGAAAATAGTAAA GAAGAAGGTATTCATATTTCTAAATGTTTTCATATCCTTCTTATTTTATGCCCGTTTTTATCGTGTAAAGTATGTTAATG ATATCTGTCATACCAATTGTAGCCTGATCCCCGTGTCAGAGAGAAGATAATGATTCTCATAGATACTTGGCAAGAAGCTT TTGGTGGGCCAAGAGCAAGATATCCACAATATTATGCTGCGTACCAGGAACTACTGGTATGTTTACTTAGTTATTTGCAT TGAGATATTTTATACCAAGTATTTCCTGTCCACTTTTCATCATGAGCTGGGAGGGAAACAGTTCATAAGAGAAGCCTTTA GCACGTTTCTTTCAGTCTTAATGCTCTCATCTTGAGAGTGAATGGTTGCTCTCAGAATATTTGCATAAACCTTTTTAAAT TTAATTTGTTTGTCTAGTTTTTTCTATAACGGATTTGTTTGTTCAGCATTCTGGGGCAGTATTCCCTCAGAGATCCGAGC AATCTGCACCTGTATTCACACCACTCCAAACACAACCATTAACATCATACCCTCAAAATATACGAGACTCTGATGCTCAG CCACACACAGCCGAGTCCTCGGCAGAGTCTGAGTTTCCAACGCTAAGGTACATTTCTAACTCATACTACCTTCAGATCTT TCTTTGATGGAATGTGTTAGTATACACAATTTTAGCATAGTCTAGTGTATAACTGTTAGATTATACAAAGTATCTTATAA TATCTTTATCTTATCCTAGAGTATCTTTAGATTATCTCCTCGGAATATCTTATAATAGCTATATCTTATCCCAGAGTGTC TTAGATTTTTTCTTAGCATTAGTTTCCATATTAGATTAAAAGTCTAATATTATTATAAATAAGAGTTAATAATATAACCA TTTTAGTTTAAGAGGCTAATATATCACATAATAATAAAATTATAAAACCATTTTATTCTTTCTCTTCTCTGAGGGAATAT TTGACAATCTTTATAAAACGCAGTGACACACTATTTGACAATCTTTATAAAATGCTTTTGTCTTGTGAATTTCACAGTGG TGCCACCAAACATAGATTTTCCCTGGTTTTTTAGTCGGGCACAAAATTTACCCAATAATAAACATTGTTTTAAAGAGTTT GTCTAATAGCACATTGCTAGCTTTTGTCTCACTATTATTATGATGATTGATGATGGTAAACCACAGGTAATTATGTGGTA CAGGTTACCATGGGTAGTTATGCGATGATTTGTTTAAATTGAACTTTCTGTTGCATTGCAGTTTGTCTGAAATTCAGAAC GCACGTGGTATTATGGATGTTCTTGCAGAAATGCTCAGTGCTATTGAGCCTGGTAACAAAGAAGTAAGTTGAACTTTCAA AATATAATGTAGATGAATAAAATATTATTTTGTGAAGCATAAGGCTTTTATCAATAAAGCTACTGATTCTGGTGAACATG TAAATTTCATGTATGACCTTTACTTCTATTTTCAGGGGCTTCGGCAGGAGGTTATTGTTGATTTAGTGGAGCAATGTCGA ACATACAAGCAGAGAGTGGTGCACCTCGTTAATTCAACATCGTAAGGCCAGATGTCCGTTTTCATGATATTATGAGATAA AAATGGCCATAATATCATATTCTTTACATGTTTGATTAGTTTAATTGTATTCTTAATAAATTTTCTTATTTAAATCCAAA GGAAAAAAGCCAAGTTATTATTTATGGTGTGTTCTTGTCTACTTTTCCAGGGATGAGTCGCTGCTATGCCAAGGACTAGC TCTGAATGATGATCTGCAGCGTGTACTGGCAAAACATGAATCCATTGCTTCAGGAACTCCTGGTCAAAATCATACTGAGA AACTGAATCCTGCACCTCCTGGAGCTCTTATAGATGTTGGTGGTCCCTTGGTTGATACTGGAGATACTAGTAAACAATCT GATGAGAGGTAGCCCACTGTCTATTGTTGCTCTATTGCTCTGCATTCATTGACATAGGATTAGGATGCTATCAGTCTTGC CCAATTAAAATTCAAAAAAATCATTTTCACCATATTGGAATCCATGTAATTCATTTATGTTTACTATTTTTTTTGACACA GTGAATTTTATAATTCATAATAAATTCTGACTATATGTGCCAACTGTATCCTGGAAACTTGTTTATATTGTTTCTAATGG ATGTTTTTGTTCCGTTAGGAATATAATTGAAAATGAATTTTTGGTCGTTGGCTTTAAAGATAAGGCTTTGCAAAGTTCTG TGCTGCTGTGCTATAATGCTATTATTTACATTTGCAATAGAATCAAGAAAGAGAGTCTATGGGTTCTTAGGTTTCTGTCA TTGTTCACATTTGCATGTGGGAGTGTTATTACTTATTTGCCACTATCAGAGAGTCTCTGTTTATGTATTTCACTTAATAC ACCAGTAATTTGTTGATGAATCTCTTGTTTTCGATGAACTGGGTCATAGGCTTAGTTTTTGTGGCAGACATGCATATTTT ATTGTTTCATTATGAAAATCCAGAATTTGATTGGTGGACCAAATCAATTCCAAGTTGACTTAACCTGTCTAGTACCTTTT GGATTTCTGGTTATATGGCTCCTCACTTAAATATCTTTTTGTAGGTCTCCTTCTGGTGCTGAAGGAGGGTCTCAAACATT GAATCAGTTATTGCTTCCTGCACCTCCTACATCAAATGGTTCAGCTCCCCCCATTAAGATTGATCCCAAATTGGACCTGC TCAGTGGTGACGACTATAACTCACCAAAAGCAGACAATTCACTTGCTCTCGTTCCTGTTGGACAACAACAGCCTGCAAGT CCTATGTCTCAGCAGAATGCCCTGGTTCTTTTTGATATGTTTTCAAATGGAAGCAATGCGCCTTCTGTCAATAACCAGCC AACTAATGTTGCTGTGCCGAACAGTCCATTAAGCCCCCAATTTCAACAGCAGCAAACTTTCATTTCTCAAGGTGTATACT ACCCCAATGGAAGTATGCCAAGTGTGGGGTCACCTCAGTTTGAGCAATCACCATATGCACAAAGCACTGGTCCTGCCTGG AATGGCCAGGCTGCACAGCAGCAACAGCCACCTTCACCAGTCAATGGTGAGCTTAATTCTTCTTTACATCTAATTCCTGT TTGTCTCAAATCCTTTGCAATTGCATTCTCTTCTGTTTAGTAGTCTCTTTAAGAAATTCTAGTTTCTGATCCCTGCTTTC GAGTTGGTTCATGGAAATTCATAGTTGTGCTCCCATATGTTGGACACTTCTGCATCGTTCACTTTCCCCTCCTTTTCCTG TTATACAGGTGCACAAAGTGGTGGGTCATTCCCACCACCACCCTGGGAAGCTCAAGCCGCAGAAAACGGTAGTCCGGTTG CCGGCAATCAATACCCACAACCACTGCAGGTCACTCAAATGGTTGTGACACATGTACAAGGTGCTCCCCTTCCTCAGGGA CCTCAAGCAATGGGGTATGACCAGGCTGTTGGAATGTACATGCAGCAACCAAATGCTAGCCATATGTCAGCAATGAATAA CCAAGTTCAAAGTAATCAATTTGGCATGCACCCTCAGTATGCTCAGGGTGTAGCAGCTTCTCCCTATATGGGTATGGTTC CACATCAAATGCAGAATGGTCCTGTGGCTCATCCCATGTATGCTCAACAGATGTATGGCAACCAATACATGGGAGGATAT GGCTATGGTCAACAACCACAACAAGGGGTTCAATATGTTGAGCAGCAAATGTATGGTTTATCTATGAGTGATGATAGAAA TTCCTCATATGTGCCACCGAAGAAGCCTTCCAAGCCAGAGGATAAGTTATTTGGAGACCTTGTTGACATGGCAAAAGTGA AACCAAAACCTACTCCCCCGTAGAACTGTGATTTGGTTTGCATTTTTCACTTGTTTGCCAACTCTTGTCCTCTTTTTTTT TTTCTTCTTTATTCTTTTCATTTTACTTTCACGTATATTATTATATGTATATTTTTTTGTTACTGTCCCATATTGTGTTG CTCGTCTGGAAATTGGTTTTAGATTATGTACATTTGTTATAGAGAAAACACTGAAACGTGAAAGTAAAAAACTTGGTTTG GCTAGAGCATACTATAGTGTTTGTCCAATTTGGGATAATAAAAGCTTCTTTCAGATTGAACTTTTAAAAAATTAGTGATA ATAAATTTATTCGACTTATTTCTCCTAAAATAACATATGTGCCGGAAATGCTTGATGAAAAATAAAGAAAATATGATGAA CTGTACTCATTCTTATTGGTTATATAATTAATAGATAGGCTTAAATACTCTGGAGGTCCCCGAAATTGTCTCCCGTACGA AAATAAGTTCCTAAATTTTTTTTTTCGATTTCGGATCCCTGGAAATTTTTTTTAATCAGAATAAGTCCCTACTCGTGTTT CCAGCT
CDS sequence (LotjaGi1g1v0401200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGAATCCCTTGGTGGAGCGTGCCACAAGCGACATGCTCATCGGTCCTGACTGGGCTTTGAACATCGAGATCTGTGA TATACTCAATCGTGACCCTGCGCAATCAAAGGATGTTGTTAAAGGCTTAAAGAAGCGGATTGGAAGTAGAAGTTCTAAAG TTCAACTTCTTGCACTAACTCTTCTTGAGACAATCATAAAGAATTGTGGGGACATTGTCCACATGCATGTTGCAGAGAGA GATGTTCTTCATGAGATGGTGAAAATAGTAAAGAAGAAGCCTGATCCCCGTGTCAGAGAGAAGATAATGATTCTCATAGA TACTTGGCAAGAAGCTTTTGGTGGGCCAAGAGCAAGATATCCACAATATTATGCTGCGTACCAGGAACTACTGCATTCTG GGGCAGTATTCCCTCAGAGATCCGAGCAATCTGCACCTGTATTCACACCACTCCAAACACAACCATTAACATCATACCCT CAAAATATACGAGACTCTGATGCTCAGCCACACACAGCCGAGTCCTCGGCAGAGTCTGAGTTTCCAACGCTAAGTTTGTC TGAAATTCAGAACGCACGTGGTATTATGGATGTTCTTGCAGAAATGCTCAGTGCTATTGAGCCTGGTAACAAAGAAGGGC TTCGGCAGGAGGTTATTGTTGATTTAGTGGAGCAATGTCGAACATACAAGCAGAGAGTGGTGCACCTCGTTAATTCAACA TCGGATGAGTCGCTGCTATGCCAAGGACTAGCTCTGAATGATGATCTGCAGCGTGTACTGGCAAAACATGAATCCATTGC TTCAGGAACTCCTGGTCAAAATCATACTGAGAAACTGAATCCTGCACCTCCTGGAGCTCTTATAGATGTTGGTGGTCCCT TGGTTGATACTGGAGATACTAGTAAACAATCTGATGAGAGGTCTCCTTCTGGTGCTGAAGGAGGGTCTCAAACATTGAAT CAGTTATTGCTTCCTGCACCTCCTACATCAAATGGTTCAGCTCCCCCCATTAAGATTGATCCCAAATTGGACCTGCTCAG TGGTGACGACTATAACTCACCAAAAGCAGACAATTCACTTGCTCTCGTTCCTGTTGGACAACAACAGCCTGCAAGTCCTA TGTCTCAGCAGAATGCCCTGGTTCTTTTTGATATGTTTTCAAATGGAAGCAATGCGCCTTCTGTCAATAACCAGCCAACT AATGTTGCTGTGCCGAACAGTCCATTAAGCCCCCAATTTCAACAGCAGCAAACTTTCATTTCTCAAGGTGTATACTACCC CAATGGAAGTATGCCAAGTGTGGGGTCACCTCAGTTTGAGCAATCACCATATGCACAAAGCACTGGTCCTGCCTGGAATG GCCAGGCTGCACAGCAGCAACAGCCACCTTCACCAGTCAATGGTGCACAAAGTGGTGGGTCATTCCCACCACCACCCTGG GAAGCTCAAGCCGCAGAAAACGGTAGTCCGGTTGCCGGCAATCAATACCCACAACCACTGCAGGTCACTCAAATGGTTGT GACACATGTACAAGGTGCTCCCCTTCCTCAGGGACCTCAAGCAATGGGGTATGACCAGGCTGTTGGAATGTACATGCAGC AACCAAATGCTAGCCATATGTCAGCAATGAATAACCAAGTTCAAAGTAATCAATTTGGCATGCACCCTCAGTATGCTCAG GGTGTAGCAGCTTCTCCCTATATGGGTATGGTTCCACATCAAATGCAGAATGGTCCTGTGGCTCATCCCATGTATGCTCA ACAGATGTATGGCAACCAATACATGGGAGGATATGGCTATGGTCAACAACCACAACAAGGGGTTCAATATGTTGAGCAGC AAATGTATGGTTTATCTATGAGTGATGATAGAAATTCCTCATATGTGCCACCGAAGAAGCCTTCCAAGCCAGAGGATAAG TTATTTGGAGACCTTGTTGACATGGCAAAAGTGAAACCAAAACCTACTCCCCCGTAG
Protein sequence (LotjaGi1g1v0401200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVNPLVERATSDMLIGPDWALNIEICDILNRDPAQSKDVVKGLKKRIGSRSSKVQLLALTLLETIIKNCGDIVHMHVAER DVLHEMVKIVKKKPDPRVREKIMILIDTWQEAFGGPRARYPQYYAAYQELLHSGAVFPQRSEQSAPVFTPLQTQPLTSYP QNIRDSDAQPHTAESSAESEFPTLSLSEIQNARGIMDVLAEMLSAIEPGNKEGLRQEVIVDLVEQCRTYKQRVVHLVNST SDESLLCQGLALNDDLQRVLAKHESIASGTPGQNHTEKLNPAPPGALIDVGGPLVDTGDTSKQSDERSPSGAEGGSQTLN QLLLPAPPTSNGSAPPIKIDPKLDLLSGDDYNSPKADNSLALVPVGQQQPASPMSQQNALVLFDMFSNGSNAPSVNNQPT NVAVPNSPLSPQFQQQQTFISQGVYYPNGSMPSVGSPQFEQSPYAQSTGPAWNGQAAQQQQPPSPVNGAQSGGSFPPPPW EAQAAENGSPVAGNQYPQPLQVTQMVVTHVQGAPLPQGPQAMGYDQAVGMYMQQPNASHMSAMNNQVQSNQFGMHPQYAQ GVAASPYMGMVPHQMQNGPVAHPMYAQQMYGNQYMGGYGYGQQPQQGVQYVEQQMYGLSMSDDRNSSYVPPKKPSKPEDK LFGDLVDMAKVKPKPTPP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 657 | 657 | 1.4E-287 | – | |
| PANTHER | 1 | 657 | 657 | 1.4E-287 | – | |
| CDD | 2 | 130 | 129 | 6.17691E-64 | – | |
| SMART | 2 | 134 | 133 | 2.8E-54 | ||
| Gene3D | 2 | 148 | 147 | 5.1E-49 | ||
| SUPERFAMILY | 3 | 138 | 136 | 1.83E-44 | ||
| Pfam | 4 | 123 | 120 | 7.3E-31 | ||
| ProSiteProfiles | 9 | 138 | 130 | 43.788 | ||
| SUPERFAMILY | 141 | 269 | 129 | 3.92E-28 | – | |
| MobiDBLite | 160 | 182 | 23 | - | – | |
| ProSiteProfiles | 180 | 268 | 89 | 17.271 | ||
| Gene3D | 180 | 276 | 97 | 1.5E-21 | ||
| CDD | 188 | 266 | 79 | 8.56182E-31 | – | |
| Pfam | 194 | 268 | 75 | 3.4E-17 | ||
| MobiDBLite | 265 | 340 | 76 | - | – | |
| MobiDBLite | 304 | 328 | 25 | - | – | |
| MobiDBLite | 431 | 496 | 66 | - | – | |
| MobiDBLite | 431 | 471 | 41 | - | – | |
| MobiDBLite | 621 | 658 | 38 | - | – | |
| MobiDBLite | 633 | 647 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Intracellular protein transport | The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. |
Expression pattern of LotjaGi1g1v0401200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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