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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0403700 |
| Transcript ID | LotjaGi1g1v0403700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein nrt1 ptr family 1.2; TAIR: AT1G52190.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q9M817|PTR6_ARATH Protein NRT1/ PTR FAMILY 1.2; TrEMBL-Plants: tr|A0A0B2PRK2|A0A0B2PRK2_GLYSO Putative peptide transporter; Found in the gene: LotjaGi1g1v0403700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:89262179..89267106) extracted from Lotus japonicus Gifu genome v1.2.
TCGGCAATGTACCTGAAACGGGTTCGTGGCACCTAAAGTTAAGAACTTAAAAGGTGAACAATGTTTTCTCACCTCAATTC TATCTAGTGGGTTCATGAGTTCCTCAAAAGTAAATTCATGATAAGGTAAGTATCATACTATTAACTGAGTTATTTTTTTA ACTTTTTAAACTAAATAATTACTATTAATAGTATGATGACTTATTTATCATCATCACTTTAGAAGAGCTAAATGTAACTT GAGTGAGATAGATAAACATATTTTTTGGTAGATAGAAAGAAATTATGATTATGAAAGGGAAAAATGAATAAGAAGAAGAA ACAATTAAGAATGTCATAATAGTACAAAATAAATTAAATGTAAATCTATCAAAGTTAGTGGATTAATTGTCGTTGCACTA CTCCAAAGATTGAAATATGAATTGTGGCCACTGGTCAGAGCATGAAAGCTAAAAACTTTGTTAAAGTTTTATAATCATTT TGCTTTAAAAAGCATTTCATGAACAATTATTTCTTTGAATTTAACTAGACATGAACCCGCATGAGAAGCCTTTAACTTTT TTAAGAAACAAAGATAATATTATTCAGAATATTATAGCATAAGATAAGTTTAATTTACTACATGACATTGAAATTTCTTG TAGTAATATTTGGATTAACTATAGAAATATCATTATATAAGAATATAATTATATTAATTAAATTTAATTCTCCTTAAAAT TTTATATATGTAAGAATATACTAGTAATTTTTTTAGAAATACATTATCAAATGAAAATTAATTTGTCCCCGAAGAATAAC TTAAGTAATAAGAGCCGATGGGCATATAGGTTAGGGAGGAGATATCCATATATCAACCTTAGAGACTGGAGGGCTGTAGT TTATCTCTGGAGGTATGTAGTTTATCTTTTCAATGTAATTAAAAAAATGAAAATTAATTTGATAAATGAAAATTTGCCGT TCCATTGGCTTATTAAAAGCTAGTAATATGTCAAATTTATGATGGAAGAACAAATGGTAGTGTAATTAAATGGAAAGTTA TCACAAAAATTAAAGAAATAAATAGGGCAGGTACGTACGTAGGGAAAGATAGAAATATCAAGGGGTTCAACTACATGGTT TTTTTAATAGGCAAATGTGACTAGTTGTTAGTAAATTAATTAGTTCATTTTCAAGATTCGAACCCTTCACCATTCACCCT TTATTTCCCTCTCCCTAATTTTTATGTCTCCTAACTCTTACCACACTGCTTCAACTACATGTGATATTAGAAAATTGCTA TGCTGAAACAATTGAGTTCATTGGTTAAACAAGATACCCATGTTATAATTTAACTTTTATATATATATAGTTAAAAAAAA TAATACTACCTCCTCCCCGTTCCACAAAGATTAGCCATGTGTCAATTAGAATAATAACTGAACTAACTAAACTAATTTTC CTTATGAAGATTGCACATGAATCACGGCCACATAAAAAAGCAACCGTATTAGAAGTGTATTCCTTAAGCAAGATTACAAA TGGTGGGAAAGGTGTCTCTTGCTTGCATCATTGGAATCTGCCTGCAGAAGATTACAAGAGCAACGTGTATGATTCTTCAA GAAGCAGGTTTGCTCATTTTACCTTTTTCTGAGTCATCATATTCATATGTGACTCGCTGCTGTACTGTTCAGGACTTCAT CAGTTCACCACCACACTCATCTTCTTGTGTCTCTGCAGGTGAGAATGGAGAATGTGATAGAGGAACCACTTCTGAACAAG CACAACTCCAATGTCAAGGGTGGCTTCAGAACCATACCTTTCATCATAGGTAATAATGAGATATGTATAGGAGATCTAAG TCACCCTATATTTTTAATTTGATAATATAATGCTGATTACAAAGTTTCCTAGTTATATATAACATATATTTCCTAATCTG AGTAGAGATTAGTTTCTCTTAGACCCATATTCACTTACAGTGCTTCATCAAGATGGATCCTCTGCAGCTATTTTCTCTGC AGCTCACTGCTGCAAATTCTAGGACTTTGATTTTTACATTAAATGGTTCAGATTGATTTGTTAAAAGTTGAACTGGTCGA CAGTTTAAAGCATCATATTTGCTGTTGCAGAGGCTGCAGGGGCAGCAGAGGATCCAAATTTGTGCTTCATAGTAAATTGT TCAACTTTACTAATCTGTATATGAATGTTGTTGTGGCAGCAAATGAGGCATGTGAGAGGCTTGCGAGTCTTGGGCTAATG CCTAACATGATATTGTACTTGACCAAAGTGTATGGCATGCAAACTGCTGAAGCAAGCAATTTCCTGTTACTTTGGTCGGC CGCCACAAATTTCATACCCCTCATTGGTGCTTTCCTGGCAGACTCCTATGTCGGTCGGTATCCCATGATTGGTTTTGGAT CTATTGCTAGTCTACTGGTAATTTTCTTTCATTCTTTAGAACATGCTCCCTCACGCGAGCCAACTGGCTTGAAGTGTGGA TAATGTACATACTCGCCTACCATGTGCTGAAAGTCAACTTTTGGGTTCCTATTCTAGACCACTTTGATCATAGAGACTCT GATACCATGTCAAAATCGTACTCTAGACCACTTGATCATATATATAGACTCTGATTCCATATTAAGAACTAGTTATCCGA AGAGCTTAAGCTTTATGAATGGTTTTTATATTATATTTCTAACACTGGGATTGTGCAGGGAATGGTTCTTCTATGGCTAA CAACTCTATTTCCAACATCAAGGCCAATATGTAACCAATTTGCCAACAGTTGCAGTTCCCCTACAACTATACAACTTTTG ATCTTGCATTCTTCTTTTGCCCTAATGTCCATTGGAGCGGGAGGCATAAGATCATCTTCCTTAGCCTTTGGTATAGACCA GTTAAGTAAAAGGGACAAAGATGCAGGAATCAAAGAGAGCTACCTCAGCTGGTACTATGCTGCTGTGTCCGTGTCATCGC TGCTAGGTTTAAGTGTTGTTGTCTATATACAAGATAACATGGGGTGGAAAGTGGGATTTGGAGTTCCTGTTATCCTAATG TTTATAGCCACTGTCTCATTTTTCTTAGCAACACCATTTTATGTAATGCTGGAAGCTAAAAGGAACATCCTAAGTGGGTT AGCTCAGGTCTTTGTAGCTTCTTACAGAAATAGACTTCTGCAGTTACCACAGGAGGACAAGAATGGTATCTACCACCATG AGAAGGATTCCATTCTCCAAGTGCCAACTGACAAATTAAGGTTTGTTTTGCTTCTTTTGTCTCATTTATCATGCTTTGGA TATCACTAACTACGTGTTTGGTCAGCATTGTCATAATTGATTTTGGTAAAATTGATTACACTAAAAGTGAGTTAAGATGA ACTGATTTACATTTGGAAAAATTATGGGAAAATTTATTTCTATAACGTAATGTTGTGAAATTTCAAAATTGATTATGTCC ATGGAAGAAGCTACTCTCTATAGCTTCCTTTTCTGCAAAATTGATTAACACACCTAGAAGTGATTATGGTCAATGATAAT TGATTCAAATGCCCCCAAAAGTGGAACCAAATTGTTAAGAGAAAAAGTTCACTCACTATTGTTATGTAGCTGGAATACTT GTTTCACACTTTCAGTGAGCTCACGATATTAGTTTGGTGGATCATGTGCCAGCCAAGTATGAACATACTGGTTGTTAGCT AATAGTCATGAATATGTTAACATTAAATTGAAAACCTATGCATATATATGCCATATTTGATTTCTAGTTCATTAAAACTT GGATTATATACTGCGAAGTGTTCTTGTTATAAATCAAGAGCAGAGGCTTAAGATGAAACTTTATTGCCTAGGTTTCTCAA CAAAGCATGCATAATTGGAAATCCCCTACAAGATCTAACACCCAATGGAAGAGCTTTGAATCCTTGGAATCTTTGTACAG TAGATCAAGTGGAAGACCTCAAGGCACTTCTAAAGATAATCCCAATCTGGACAACAGGAATCATGTTAACTGTGAATGTC AGTCAGGGTTCATTTCTGGTACTACAGGCATCCTCTATGGACCGCCACATTACTTCAAATTTTCAAGTTCCTGCAGCTTC CTTTGCAACATTTATGATTTTATCTTTAATACTTTGGGTTATACTTTATAATCAAGTTTTGGTCCCTGTGGCATCGAGGA TAAAAGGGCGCCAAACACTCCTAGGTACGAAACAGAAAATGGGGGTAGGTCTTTTTTCTTGCTGCATATCAATTGCATCA CTAGCCGTTGTTGAGAGCGTTAGACGCAAAATTGCTATTGAGCAAGGCTACTCAGAACAACCTCAGGCTGTGGTGAACAT GTCTGCTATGTGGCTCTTGCCGCGCGAAATCCTCGATGGATTGGCTGAGGCAGCGAATGTGATCGGACAGATTGAGTTTT TTCTCACTGAGCTTCCTCAATCTATGTCTAGCGTGGCTTCGACTCTTGGTGGACTTGGGATGTCAGTGGGAAGTTTGGTA GCAAGTTTTGTTCTGAGTGCTGTTGATTCTGTTACTGGAGGCAGGGGAAATGAAAGTTGGCTTTCAAGCAACATAAACAA GGGTCACTATGACTACTATTATGGCATCATTTGTGCTTTGAGCATTGTAAATTTTGTGTATTTTCTTTACTGTAGTAAAT CTTATGGTCCTTGTAAGGAAAGAGGAAAGTAAAATCTTAGATATAAAATCTTAGATACAGGTGATGTTAATGTTCTTGAG ATCTTCTAAGTTCCTATTTGATACATGACAGAGTAGGCCCAGAATGAAAGTAGTACCTGGATATGATTGATAACTAGATT GTTGATTGTACTAGATTCACATCTTATACTGTTAGTATTAAGAAAGGAACAGTTGTTTCGTGTATTCATGATATTGTAAA AAAAACTTTTATCAACTTTACTCCTGCTCCCTGTAAGTTAATTTGCTA
CDS sequence (LotjaGi1g1v0403700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAATGTGATAGAGGAACCACTTCTGAACAAGCACAACTCCAATGTCAAGGGTGGCTTCAGAACCATACCTTTCAT CATAGCAAATGAGGCATGTGAGAGGCTTGCGAGTCTTGGGCTAATGCCTAACATGATATTGTACTTGACCAAAGTGTATG GCATGCAAACTGCTGAAGCAAGCAATTTCCTGTTACTTTGGTCGGCCGCCACAAATTTCATACCCCTCATTGGTGCTTTC CTGGCAGACTCCTATGTCGGTCGGTATCCCATGATTGGTTTTGGATCTATTGCTAGTCTACTGGGAATGGTTCTTCTATG GCTAACAACTCTATTTCCAACATCAAGGCCAATATGTAACCAATTTGCCAACAGTTGCAGTTCCCCTACAACTATACAAC TTTTGATCTTGCATTCTTCTTTTGCCCTAATGTCCATTGGAGCGGGAGGCATAAGATCATCTTCCTTAGCCTTTGGTATA GACCAGTTAAGTAAAAGGGACAAAGATGCAGGAATCAAAGAGAGCTACCTCAGCTGGTACTATGCTGCTGTGTCCGTGTC ATCGCTGCTAGGTTTAAGTGTTGTTGTCTATATACAAGATAACATGGGGTGGAAAGTGGGATTTGGAGTTCCTGTTATCC TAATGTTTATAGCCACTGTCTCATTTTTCTTAGCAACACCATTTTATGTAATGCTGGAAGCTAAAAGGAACATCCTAAGT GGGTTAGCTCAGGTCTTTGTAGCTTCTTACAGAAATAGACTTCTGCAGTTACCACAGGAGGACAAGAATGGTATCTACCA CCATGAGAAGGATTCCATTCTCCAAGTGCCAACTGACAAATTAAGGTTTCTCAACAAAGCATGCATAATTGGAAATCCCC TACAAGATCTAACACCCAATGGAAGAGCTTTGAATCCTTGGAATCTTTGTACAGTAGATCAAGTGGAAGACCTCAAGGCA CTTCTAAAGATAATCCCAATCTGGACAACAGGAATCATGTTAACTGTGAATGTCAGTCAGGGTTCATTTCTGGTACTACA GGCATCCTCTATGGACCGCCACATTACTTCAAATTTTCAAGTTCCTGCAGCTTCCTTTGCAACATTTATGATTTTATCTT TAATACTTTGGGTTATACTTTATAATCAAGTTTTGGTCCCTGTGGCATCGAGGATAAAAGGGCGCCAAACACTCCTAGGT ACGAAACAGAAAATGGGGGTAGGTCTTTTTTCTTGCTGCATATCAATTGCATCACTAGCCGTTGTTGAGAGCGTTAGACG CAAAATTGCTATTGAGCAAGGCTACTCAGAACAACCTCAGGCTGTGGTGAACATGTCTGCTATGTGGCTCTTGCCGCGCG AAATCCTCGATGGATTGGCTGAGGCAGCGAATGTGATCGGACAGATTGAGTTTTTTCTCACTGAGCTTCCTCAATCTATG TCTAGCGTGGCTTCGACTCTTGGTGGACTTGGGATGTCAGTGGGAAGTTTGGTAGCAAGTTTTGTTCTGAGTGCTGTTGA TTCTGTTACTGGAGGCAGGGGAAATGAAAGTTGGCTTTCAAGCAACATAAACAAGGGTCACTATGACTACTATTATGGCA TCATTTGTGCTTTGAGCATTGTAAATTTTGTGTATTTTCTTTACTGTAGTAAATCTTATGGTCCTTGTAAGGAAAGAGGA AAGTAA
Protein sequence (LotjaGi1g1v0403700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MENVIEEPLLNKHNSNVKGGFRTIPFIIANEACERLASLGLMPNMILYLTKVYGMQTAEASNFLLLWSAATNFIPLIGAF LADSYVGRYPMIGFGSIASLLGMVLLWLTTLFPTSRPICNQFANSCSSPTTIQLLILHSSFALMSIGAGGIRSSSLAFGI DQLSKRDKDAGIKESYLSWYYAAVSVSSLLGLSVVVYIQDNMGWKVGFGVPVILMFIATVSFFLATPFYVMLEAKRNILS GLAQVFVASYRNRLLQLPQEDKNGIYHHEKDSILQVPTDKLRFLNKACIIGNPLQDLTPNGRALNPWNLCTVDQVEDLKA LLKIIPIWTTGIMLTVNVSQGSFLVLQASSMDRHITSNFQVPAASFATFMILSLILWVILYNQVLVPVASRIKGRQTLLG TKQKMGVGLFSCCISIASLAVVESVRRKIAIEQGYSEQPQAVVNMSAMWLLPREILDGLAEAANVIGQIEFFLTELPQSM SSVASTLGGLGMSVGSLVASFVLSAVDSVTGGRGNESWLSSNINKGHYDYYYGIICALSIVNFVYFLYCSKSYGPCKERG K
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 62 | 62 | - | – | |
| PANTHER | 12 | 558 | 547 | 5.7E-263 | – | |
| PANTHER | 12 | 558 | 547 | 5.7E-263 | ||
| CDD | 24 | 553 | 530 | 0.0 | – | |
| SUPERFAMILY | 39 | 550 | 512 | 1.92E-18 | ||
| TMHMM | 60 | 82 | 23 | - | – | |
| Phobius | 63 | 82 | 20 | - | – | |
| Phobius | 83 | 88 | 6 | - | – | |
| Phobius | 89 | 112 | 24 | - | – | |
| TMHMM | 92 | 114 | 23 | - | – | |
| Pfam | 92 | 517 | 426 | 4.3E-66 | ||
| Phobius | 113 | 131 | 19 | - | – | |
| Phobius | 132 | 158 | 27 | - | – | |
| TMHMM | 134 | 156 | 23 | - | – | |
| Phobius | 159 | 178 | 20 | - | – | |
| TMHMM | 176 | 198 | 23 | - | – | |
| Phobius | 179 | 198 | 20 | - | – | |
| Phobius | 199 | 209 | 11 | - | – | |
| Phobius | 210 | 232 | 23 | - | – | |
| TMHMM | 210 | 232 | 23 | - | – | |
| Phobius | 233 | 360 | 128 | - | – | |
| TMHMM | 324 | 346 | 23 | - | – | |
| TMHMM | 359 | 381 | 23 | - | – | |
| Phobius | 361 | 385 | 25 | - | – | |
| Phobius | 386 | 404 | 19 | - | – | |
| TMHMM | 405 | 422 | 18 | - | – | |
| Phobius | 405 | 422 | 18 | - | – | |
| Phobius | 423 | 486 | 64 | - | – | |
| TMHMM | 483 | 505 | 23 | - | – | |
| Phobius | 487 | 510 | 24 | - | – | |
| Phobius | 511 | 529 | 19 | - | – | |
| TMHMM | 530 | 549 | 20 | - | – | |
| Phobius | 530 | 549 | 20 | - | – | |
| Phobius | 550 | 561 | 12 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0403700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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