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LotjaGi1g1v0412400.1

Overview

Field Value
Gene ID LotjaGi1g1v0412400
Transcript ID LotjaGi1g1v0412400.1
Lotus japonicus genome version Gifu v1.2
Description Xylulose kinase-like protein; TAIR: AT5G49650.1 xylulose kinase-2; Swiss-Prot: sp|Q5R830|XYLB_PONAB Xylulose kinase; TrEMBL-Plants: tr|I3SF17|I3SF17_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0412400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:90369140..90373685) extracted from Lotus japonicus Gifu genome v1.2.

CGGGCTCTATGAATCTATTTTATAACATCCATTGAATATATTTTGAAACCAGATGAATTAGTTAAGTTTGTTACTAATTT ACTAGAGATAGAGAAGAGCTCATCATCATTAGATAACCTAACCCAATTTTTTATCTTTATCCAAATAATACTTAGCTGTT TTGTTCTTATCCGATCCAAAATCATCGCTTTAAAACTTGATTATAAATTATAATTATAAATAACACAAGTAAAATTTTAA CCCCTTCATCTCCTCTCACATTTCGAAAATTCAGCATCAGCACTGAACTCAAGCGGTTTCTCTCCAATGGCCGAATTCTC TCTTCCTCCGGACTCGTACTTCCTCGGATTCGACAGTTCAACCCAGTAAGTTTCCATCTTTCAGCAATCGCATCGCTATT TTCAGTTTCAATTTCATGCAATTAAATTAAAAAAAGTTTGAATTTTTATTAAAAAGATTGAATTTTGATCCCTTTGAAGG TCGTTGAAGGCAACCGTTTTGAACTCCAACCTCACCATTGTTGCGTCTGAGCTTGTTCACTTCGATTCTGACTTGCCCCA TTACAAAACCAAAGATGGGGTGTACAGAGATCCTTCTGGCAATGGCAGAATCGTTTCACCCACATTGATGTGGGTGGAAG CTCTTGACCTCATGTTTCAGAAGCTATCAAATTCAAATTTTGATTTTTCTAAGGTTGCTGCTGTTTCTGGGAGTGGACAG CAGCATGGTAGTGTTTACTGGAAGAAGGGTAGTTCTCAGATTTTGTCTTCATTGGATGCTAAGAAGCCATTGTTAGGTCA GCTTGAAAGTGCTTTTTCCATTAAGGAGTCCCCAATTTGGATGGATTGTAGCACTACTAAACAGTGTAGGGAAATAGAGA GTGCTTGTGGGGGAGCATTGGAGCTTGCTCGAGTCACGGGGTCGCGTGCTTATGAAAGGTTTACTGGCCCCCAGATTAAG AAAATATTTGAGACTCAGCCTGAAGTTTATGATAGCACTGAAAGGATCTCGCTTGTTAGCTCATTCATGGCATCTCTTTT GATTGGGGCTTATGCTGCTATTGATCATTCTGATGGTGGAGGCATGAATTTGATGGACATAAAGAAGAAGACTTGGTCTA AAGTAGCACTTGAGGTTTATAATGCTCTTTACTTCCCTAAACTCCTATTGAATTGGTTTTTGGTTTTTGATGCACCTCCA AGTGGGGTTATGGGTTTAGTGCCTTGTATTATTCCTAAGTTTCTGTTCAGCCAATATATATTTGAATCCTAATAAGGGTT GTTGCAGGCAACTGCCCCTGGTTTGGAGTCAAAGCTTGGAGACCTAGCCCCTGCATATGCTGTTGCTGGGAAAATTGCTC CATATTTTGTAGAGAGGTTTGTTTTTTTTTGTCTCTCATAGTCTCATGCAATACAAGAAAACTCAAGAAAGCTTATCAGT TTCCAATGAATTTTATATTTCTCAGACAAGATTTGTAATGTACTGACATAGAACCTAGGAAGAGAGAGCCAAATAAATAT TATCTGATGGACTTGATGTTTAATTGTACAATGAGATATTGCCCTATTTGAAATTTGAAATGATTATGAACACATTGTTT CTCAAATATTTTGTCACCCATATTGCAACAATTGCCAACAATTGCAGGCTTCTAAGTATCTCATACTCGATTAGTAAAAT ATGATGCAAGTTATTTATATGGTAGCTATTTGCAATAAGTTTGGACATATGTTATATATAAGGATATGAAATTGCGTCAC AACTACCTACTAACTGAAGTGGTCTATCTTCTCCATGGGAAATTGAGTGTACAGGAAAATCTTCTATAAATTCCCATATA AAACTGCTATGGTTTTTTATCTATTTATCTGTTGCATGAGCTACATTATAATACTTGGATTGATGGCTGAAGTGTATTTC TTTGGTCTTAGGTATAACTTTAATAAGGATTGCTCGGTTGTTCAGTGGTCAGGAGACAATCCTAACAGTGTGGCAGGTGT CAGAATTTCTTCATTAACATATTCCACAATTTATCTCTAATTTTGTACATTCTTTTGGATAATCGAAAACTTAATTCCTG TTGTGTTGTTGCTGCCATCTTCATGTCAATGACTTTTTTATAGCCCTTTATACAATCTATATTTTTTCCTGCTCATCTAA AAAGTTAATCATTTTGGATCTGCAGGATTGACCCTAAATATTCCAGGGGATCTTGCCATCAGTCTCGGCACTAGTGACAC TGTAAGTTTAATATATGCAATGTTAAGTTGCCTTACCTCTATTAGTCTGCTCTAATTTATTAGTGGTTAACCTAGGAGAT GACAGTAGCTGCAGATGTTGTCAATGGAAGAATACAAACTATTTTATCATTAAATCCCATTATATGCTCTACATATTAGT TTAGAAGTTCCTTTTCAATGTAAGTTGACACATTCGCATTTGCTTATAAACATTGGGCCTTTTCTCTCAGGTATTTATGA TCACTAAAGATACAAATCCAGGATTAGAGGGACATGTCTTCCCTAATCCAGTTGATGCAGAAGGTTACATGGTTATGTTA GTATACAAAAATGGGTCCCTTACCCGAGAAGGTATTGTTGCCATCATTCTTATCTGCACATGTATTCTTTGTTTGCATAC ACAATGCATGTATGGTTCTTGCAGTTTCTAACACTGGCCCTATTTCATATTTCAGATGTGCGCAATCGTTATGCAGAGAA ATCTTGGGACGTTTTCAATAAATTTCTGCAGCAAACACAGCCTTTAAATGGTAGGTTTCACAAAACTCCTCTTATGTATC CAATCTCTGATCTAACATTGCTTTTATTGTTAATAGGTGGAAAGTTAGGTTTCTACTACAAGGAGCATGAAATTCTTCCT CCTCTTCCAGGTGGCTGTTTAACTTGCCCACTACTAAATCACTTGTACTGAATATTAATCGGCTTTGCTTATGTTGTTGC TAAGAGTTTTTTTTATGGTCCCAGTTGGTTTCCACCGCTACGCTATAGAAAATTTCTCGGGCGCACTGGATGCAATGAAG GAACAGGAAGTTGAAGAGTTTGATCCTCCATCTGAGGTTAGAAAATGCATGATAATCCATTGAGGTAGTTCCTATAAAAT AGAACTTTCTTTTGAGCAAGAGTCTAAATTACAGGTCCGGGCGTTAATTGAGGGCCAATTTCTCTCAATGCGAGCTCATG CTGAAAGATTTGGCATGCCTTCTCCTCCAAAGCGAATCATAGCCACTGGTGGAGCTTCGGCAAATCATGACATCCTTAGC TCCATAGCTTCGATTTTTGGCTGTGATGTATATACAGTTCAAAGACCTGGTAAGCAAAATTTGGCAATCTCAGCATGAGA CACTATTAATGATGACAAAGTTTGTTTAACCCACTTACATACATGTTACCCTGTTACATTTGATACCTCTGAATTTTGTC TTATCCCTTTTGTAGATTCTTGTAATGAAATATGAAGAAATAATATCTTTCCTTTTCAAACCTGAAGTTATTGTGTTTTA AGTGTATACTACATTTCGGTGAAACAATGTAGCTATAGTTTTTCCTTTTTCTAAACGAATGTGTTAGTATCATTATGTGT CTTTTTATCCAATAGCTTATGCTTTTGGGATAGTTGGTTCATGATATATTAGAGCTTCTATGACTAAGTCGTCTAAAGTT TGGTCATTGTTTTTCCCATTAGTCTAATGAAAAGTTAAATTTCAGCACTTGGTAGGTCATACATCATAAGTGGACTATAT TCATATTCGCCTGCAGCTTCTTTTTCTTATTCATGAAAACAAATGATTTTGTTGATATCTTTATTTGAAGGTGATAGATA GACTCAACTAAATAAATAAATAAAAAATCTTCAACTTGTAACAGATTCAGCTTCTCTTGGAGCTGCATTGAGAGCTGCTC ATGGATGGCTCTGCAACAAGAAGGGAGGGTTTTTACCCATATCAGATATGTACATGGACAAATTGGAGAAAACTTCTCTG AGCTGCAAACTTTCCGTTCATGCTGGGGATCAAGAACTGGTTAACAAATATGCTGCTTACATGAAAAAGAGAATTGAGAT AGAGAATCGTCTCGTCCAAAAGCTTGGACGCTGTTGAAATACCTATGTTGCTATTTTTATTTTTTTACTCTAACAGACAT AACTTTTACCTTGAGCTCACTGAATAAAATAAAGTGATGCCAAAAGTTTAAGCATTACTTTCAAGTATGGAAGTTTCAAA ATAATTACAAATTTATCTTATTTATAGCTCTAGCTCTAACGAATTTGGATTCACTAAAGATAAGGAATTCGCAAGGCTGA ACATCTTAAACTTATTTCTGCCATATATGATCAAATGGTTCAGATTCCTTGTGTGAATGTATGATTGTCATGTCTACAAG GAACCGAAATCAAGCCGTAACACTGGACAGATACATGGCACATGTCCTCCTAAATTTTAGAATTTTTCTATTATGAGTAG TGGTTTCTCAATTATGCCTTATAATGTTGTAAACTTGTCCCCTCCTTCACATGGATGTGTTTCTTG
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0412400.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCCGAATTCTCTCTTCCTCCGGACTCGTACTTCCTCGGATTCGACAGTTCAACCCAGTCGTTGAAGGCAACCGTTTT GAACTCCAACCTCACCATTGTTGCGTCTGAGCTTGTTCACTTCGATTCTGACTTGCCCCATTACAAAACCAAAGATGGGG TGTACAGAGATCCTTCTGGCAATGGCAGAATCGTTTCACCCACATTGATGTGGGTGGAAGCTCTTGACCTCATGTTTCAG AAGCTATCAAATTCAAATTTTGATTTTTCTAAGGTTGCTGCTGTTTCTGGGAGTGGACAGCAGCATGGTAGTGTTTACTG GAAGAAGGGTAGTTCTCAGATTTTGTCTTCATTGGATGCTAAGAAGCCATTGTTAGGTCAGCTTGAAAGTGCTTTTTCCA TTAAGGAGTCCCCAATTTGGATGGATTGTAGCACTACTAAACAGTGTAGGGAAATAGAGAGTGCTTGTGGGGGAGCATTG GAGCTTGCTCGAGTCACGGGGTCGCGTGCTTATGAAAGGTTTACTGGCCCCCAGATTAAGAAAATATTTGAGACTCAGCC TGAAGTTTATGATAGCACTGAAAGGATCTCGCTTGTTAGCTCATTCATGGCATCTCTTTTGATTGGGGCTTATGCTGCTA TTGATCATTCTGATGGTGGAGGCATGAATTTGATGGACATAAAGAAGAAGACTTGGTCTAAAGTAGCACTTGAGGCAACT GCCCCTGGTTTGGAGTCAAAGCTTGGAGACCTAGCCCCTGCATATGCTGTTGCTGGGAAAATTGCTCCATATTTTGTAGA GAGGTATAACTTTAATAAGGATTGCTCGGTTGTTCAGTGGTCAGGAGACAATCCTAACAGTGTGGCAGGATTGACCCTAA ATATTCCAGGGGATCTTGCCATCAGTCTCGGCACTAGTGACACTGTATTTATGATCACTAAAGATACAAATCCAGGATTA GAGGGACATGTCTTCCCTAATCCAGTTGATGCAGAAGGTTACATGGTTATGTTAGTATACAAAAATGGGTCCCTTACCCG AGAAGATGTGCGCAATCGTTATGCAGAGAAATCTTGGGACGTTTTCAATAAATTTCTGCAGCAAACACAGCCTTTAAATG GTGGAAAGTTAGGTTTCTACTACAAGGAGCATGAAATTCTTCCTCCTCTTCCAGTTGGTTTCCACCGCTACGCTATAGAA AATTTCTCGGGCGCACTGGATGCAATGAAGGAACAGGAAGTTGAAGAGTTTGATCCTCCATCTGAGGTCCGGGCGTTAAT TGAGGGCCAATTTCTCTCAATGCGAGCTCATGCTGAAAGATTTGGCATGCCTTCTCCTCCAAAGCGAATCATAGCCACTG GTGGAGCTTCGGCAAATCATGACATCCTTAGCTCCATAGCTTCGATTTTTGGCTGTGATGTATATACAGTTCAAAGACCT GATTCAGCTTCTCTTGGAGCTGCATTGAGAGCTGCTCATGGATGGCTCTGCAACAAGAAGGGAGGGTTTTTACCCATATC AGATATGTACATGGACAAATTGGAGAAAACTTCTCTGAGCTGCAAACTTTCCGTTCATGCTGGGGATCAAGAACTGGTTA ACAAATATGCTGCTTACATGAAAAAGAGAATTGAGATAGAGAATCGTCTCGTCCAAAAGCTTGGACGCTGTTGA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0412400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAEFSLPPDSYFLGFDSSTQSLKATVLNSNLTIVASELVHFDSDLPHYKTKDGVYRDPSGNGRIVSPTLMWVEALDLMFQ KLSNSNFDFSKVAAVSGSGQQHGSVYWKKGSSQILSSLDAKKPLLGQLESAFSIKESPIWMDCSTTKQCREIESACGGAL ELARVTGSRAYERFTGPQIKKIFETQPEVYDSTERISLVSSFMASLLIGAYAAIDHSDGGGMNLMDIKKKTWSKVALEAT APGLESKLGDLAPAYAVAGKIAPYFVERYNFNKDCSVVQWSGDNPNSVAGLTLNIPGDLAISLGTSDTVFMITKDTNPGL EGHVFPNPVDAEGYMVMLVYKNGSLTREDVRNRYAEKSWDVFNKFLQQTQPLNGGKLGFYYKEHEILPPLPVGFHRYAIE NFSGALDAMKEQEVEEFDPPSEVRALIEGQFLSMRAHAERFGMPSPPKRIIATGGASANHDILSSIASIFGCDVYTVQRP DSASLGAALRAAHGWLCNKKGGFLPISDMYMDKLEKTSLSCKLSVHAGDQELVNKYAAYMKKRIEIENRLVQKLGRC
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10196:SF88
6 556 551 0.0 –
PANTHER
PTHR10196
6 556 551 0.0 –
PIRSF
PIRSF000538
9 118 110 0.0014
IPR000577
CDD
cd07776
11 493 483 0.0
IPR042024
Pfam
PF00370
11 114 104 2.1E-6
IPR018484
SUPERFAMILY
SSF53067
11 290 280 8.63E-39
IPR043129
Gene3D
G3DSA:3.30.420.40
13 508 496 6.9E-206 –
PIRSF
PIRSF000538
129 502 374 9.0E-38
IPR000577
Pfam
PF00370
139 287 149 1.2E-13
IPR018484
Gene3D
G3DSA:3.30.420.40
292 477 186 6.9E-206 –
SUPERFAMILY
SSF53067
296 495 200 1.3E-22
IPR043129
Pfam
PF02782
300 494 195 4.2E-26
IPR018485

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004856
Molecular function Xylulokinase activity Catalysis of the reaction: D-xylulose + ATP = D-xylulose 5-phosphate + ADP + 2 H(+).
Subterm of
GO:0005975
Biological process Carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
Subterm of
GO:0016773
Molecular function Phosphotransferase activity, alcohol group as acceptor Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor).
Subterm of
GO:0042732
Biological process D-xylose metabolic process The chemical reactions and pathways involving D-xylose, a naturally occurring plant polysaccharide.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0412400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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