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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0413300 |
| Transcript ID | LotjaGi1g1v0413300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glycosyltransferases; TAIR: AT1G27600.1 Nucleotide-diphospho-sugar transferases superfamily protein; Swiss-Prot: sp|Q9SXC4|IRX9H_ARATH Probable beta-1,4-xylosyltransferase IRX9H; TrEMBL-Plants: tr|Q50HW5|Q50HW5_LOTJA Glycosyltransferases; Found in the gene: LotjaGi1g1v0413300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:90519023..90523993) extracted from Lotus japonicus Gifu genome v1.2.
AATGCCAGAACTCACAACCTTAAACTCTCAACTCTCATCACAACACTAGATCTCTCATTCCATTGCTTCTCGATCTTTCT TCAATGCTCTTCCTCTTTTCACTCATTTAATTTACCGTGCGGTTGCGGTTAATTAACCAATCAATGGCGTCATTCCGGCG AACCCTTTCGCCGGCGTATCACGACCGCCAGCACCTCAACGGCGCCGCCCTATCAGCCTCCTCGTCACCTTCTCACAAGG CTCCATCATCCAACACCAAGTACTCAGCTCTTGCGGCGGCGTTCCGGCGGGTGGTCGGTGATATCCTCATGCGGCGGAAC AGTCGGAAGGGGCAGTGGCGAAGGGCTGTATACAGGTGCGTGCTCTGTTTCTTCGTAGGGTTTTTGTTAGGGATGTTCCC TTTCGGTCATGTGGTGGTGGAAGAAGAAGACGAAAACAACGTTCCGGTGTCGTTTGAGATCAAGCCGCCGAACTCCGGCG AGATGAAGCGGTTTGTGATTGATCCGGTTGTGAGTTTGAGCGCTGAGAAGCAGAGCCAGAGTTTGGTGGCGGTTGAGCGG TTCGATTTCGTGCCGAGGAAGCTGCTGATTGTGGTCACGCCGACTTACAACCGTGGGTTTCAGTCTTACTTTTTGAATCG GTTGGGTCAGGTGCTGCGGTTGGTGCCGCCGCCGGTTCTGTGGGTGGTGGTGGAAATGAAGGCGGCTTCGTTGGAGACTG CGGAGGTGCTGAGGAAAACGGGTGTGATGTATAGGCATTTGGTGTGCCCTGAGAATTCCACTGATGTGAAGGACAGAGGG GTTCATCAGAGGAACACAGCGTTGGAGCACATTGAACGCCATAGGCTTGATGGGATTGTTTACTTTGCAGATGATGATAA TGTGTATTCTCTGGACTTGTTTGAGTCACTGAGAGACATAAGGTACTTGTTCTTCCTCCTATCAATCACTGCTGTTATTT GGTTTTTCTTTAGAATTTGTAATTTGAGTGTTTGCATTGATGTTTGCATCTGATTCATATTGTCTCGTGTGTATTTTTTG AGGTGTGGTTGTTGTGAGGGTTTTAAATTGTGGTTGCCGCGTAATTGCGGACAAATGCAGGTGATGCGACCGTTTTCAGG GACTCGAAAACCCATTATGTTGCGTCCGCATTTGCGGTTGCAGACCACAATTTGAAACCGTGGCTGTTGAGGACTAAGTT CTTGCCTTTTGTGTGTTGGCATTTTATATTCGTAATTTACCAATGTCTAAATGCGGTTGGCACACTTCCTTTTTTGGTGG CATTAGCTTTTAGGCTTAATTTCAGATGTAACGTCTAAAACTATGTGGCTGTGAGTGCGCGCTTTGGCCTCTGACTTATT TCTGTCCATGTTCTTGTGCGAATTTCATGACAACAAGTTTGTCACTAATTTGTAGAGTAATCCCCTGTCTTTGTTCATGA AAATATTTGTGTTCTTGGGAAGAATTAACATGATAGACAATTCTTGGTTCATTAGGGTCCAAGGTGTGTGTGTGTGGGGG GGGGGGGTTATGCGTTCTCAACAAGGCTAATGTGTTTGTGTAAGTTTGCTTTAAAGTTAGAAAGAAAGTAAACAGGTGTC TATAAAATGAAACAACAGAGCCTCATTCATGTTTATTCCTTGTAATGTGTTTTTCCGTTATTTTATTTTGGGAAACTGAT AACGTGGTGTAACGTAATTTGAGTCCAAATGAGTCCTTTGTCGTCAAATTTCGTAGTGACAGACTCTTGATTGGTATCGG TTTGATTTTAATAATTACATGGCAAGATTTGTATCTTTTGTTACTTCAGCTTGTTGATGGCTTAGAGTTAGAGTGTTTGG GTTACCGTTACGGCGTTACCTCTTCTGTTGTCTTACATCTTTCACATTAGAAGTGGATAACACGATTTCCTAAGATTAAA ATGGATGAAAATGTGGAAGCATCATTTTGTATCCATTGAGAAAAACACACATCCTAGTTATGAGAATGTTTTTACCTACA CAGCCTTATTCCAATTACTTAAAAAAATATATTGTTAACCAGTGTTGTTAAATAGCGGATATTGCAGCATTAGCGCTTTG AGGGCTCACCGCTAACCGCTATTTGCTACTATTTTCCGCTCTGAGGGCTTGACATAGAGGACTTTTGGCTTTCCGCTATT TTCTGCGATCCGCGATTAACCGCACTGTCGTTAACTTAGTTTGACTGTGTATTTTCCCCTTTATATAAATATATATATTT TTTCTCCATTTCCTTTTTAATTTGTTAAAAATAGAATATGAAGTAAACCACTCTATCATTTTTGTTATTGTTATTAATAA CGTATCAATTGAAATATGGAAACCAAAACCAAAAAATATATTTTCCCTTACGTGGGTAAATTAAAGTTTAGGAGGGAGGG AGGTTGCTTCATTCTAAGGTCAGGGCATGCCTCACAAGCTTCAACAAGGGTTCTTAGCAGTTCTAAAAGATAACCTACCA ATGAAGGATCATCTATTGGAATTAAACCCAAGACATTTCAGTAAAATACTATCTACCAGTTGAGCCAACCATTGTTTGCA ATTACATTTTCTCTTTGATTGTTATATTTTCACTGCATAATAGAATCGATTTTTTCTTGGGAAATACCTCTTTCATGATT AGATGAATATGGGTATTTGAACTTGTTATTCTTCAGTTTTCTGTGAGTTGTGTATATCTGTTTTCTGCATGTGCAAGTAT AATATGATGTTTCCATGTGAACTGCCCTGTCTTGCAAACGATCATGTACATCATTAAACTCTTACATGTTTGGTTCTGCC TAGGGATGGCAATGGGTCTTACCCGCAAAAATTACCCACAATGGGTAGGGTAAAAACCCGCAAAATGGGTATGGGGATGG GCATGGGTAAATACCCGCAAAAATAGTGGGTACGGGTGTGGGTATGGGTACTATAGTACCCAACCCGCCCCATACCCGCA CACACATATTACACTCATAATTAGTAGTATATTAGTAAACTTGAAGTATAACTTTCTAACTTCTTTTAAAAAATAAAAAA ACGTCTTTATATTTTTAAATATATATTGTAAATTTATTCTCACTTATTTTTAAAACAAGTTAGTAACCTATAACTTTATG AGTTTTATAACAAATCTAAAATTATAAATTTAAAGCTTAACTTCCTCATTTATTTTTTTTCGGAAAAATATACTTATTAG AATGATTTTACTTGCTAAATATTTGGATGGTTGTTCATATTTTTAATAAATGTTTTTTATTTTATAATACCTGTTATATT TTGATTTTCTATTAAAAAATTATGAAAGTTAAATTTTGCTTAACTAAATTGCGGGTAACGGACACGGGTACGGGCAAATA GGTACCCAGAGGGTACGGGGACGGGTACTTAGGTTGATACCCACGCGGGTATGGGGACGGGTACGGGTACTTTTTGAAAA CACGGGTATGGGGATGGGTACCATATTACCCTACCCAGACCCTACCCATTGCCATCCCTAGTTCTGCCTTTATAAATTGT GCCCTTACTTTTACCTTTATTTCCCTCTGTTCTAATGTTGAACACGTTTTATAGTCGCTTTGGAACTTGGCCCGTCGCCA TGCTTGCACCGAGCAAGAACAAGGCTGTTTTGGAGGGTCCCGTATGTAATGCAAGTCAAGTGATTGGATGGCATACAAAT GAGAAAAGTAAGAGGCTTCGCAGATTTCATGTGGACATGTCTGGATTTGCATTTAACAGCACAATCTTGTGGGATCCAAA GCGATGGCAACGCCCTACTTCAAACCCTATAAGACAATTAGACACCGTGAAGGAGGGTTTTCAAGTATGCATCCTATGAT TTACTCTTCAATTTCCCCTCCCTTTTAATATGTTCAGTTATCCTTGCTGTTGTGTATTATTTTGCTCCTTAATATCATCT ATAATTCCTATAATCAGTAAACTAATATTATCTTTGGTTTGACAGGAGACTAGCTTTATAGAACAATTGGTGGAAGATGA GAGTCAAATGGAAGCTTCACCTCATGGTTGTTTGAAAATAATGAATTGGCATCTCCATTTGGGTGCTCGTGATATAGATT ATCCAAAGGGCTGGATGCTTCAGAAAAACCTAGATGCTGTCATACCCATCAAGTAATCCTGAGTGTGTGATAGGTATGGT CTGATTTGTAATGTAGCATATAGAATCTTATTTGTAATTCTTTAGCAAATGCAGAAAGCCGCTCACCTCCAAATTCTCAT ATTTATAGAAAATAGAATGTTGTTGTTAACTAGAGAAATTTGCACCTTTGTAAAATCATCTCTCATCCTCAACCTCCCTC CAAAACTTGCTTTGGGCCTTGCAACAACTTGAAACTCATGTAGTTTAAGAAAGCTTTGATGGATTTGTACCTTAAATCTC GTGGCAGGCTAAATTAACTTAGCTTTTGTTCATGACAGTTTGCCCATATTTGGTATTGGCTCATCAGTGAATAGATGGGT GCATCAGTTTGCCACCACCATTGGAACCAGTACATTATATTGCCGGGCAATACCCGAACAGGTTACTACTGATGGTTTCC TGAATTCTCTTGCACAAATTTGTTTGCAGGGGCAAATTTTTGGTGTTGTAAATTATGCTTGCGTTATTTCTCTGATTTAT AGATAGAAAAGTAGATAAAAGGCATGTCTTGTTCGGTTACCAATGCAGAGGCTAATTTGATTGCTACCAATACTGTTTCT GATTTAGGCCTTGAATGAAAATCTGCGGAAGTTAATATACCAAATATACTCCAATCTTATTGTTCTTCACTTCGTTCAGT CTATACTTCTCTTTGGTTACTTGCATATTTTTTATGAGCGCGGAACAACAAAAACTCTTTTTAACACTCTTCAACACACT GTTTTTTTTTTAAAGAAGTATGTTTTTTGAAAAGTGAATTGTCGTACAGTGTAATACTCGCAAAGTAGTTGGATGCACAA GTATGAAGTAC
CDS sequence (LotjaGi1g1v0413300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGTCATTCCGGCGAACCCTTTCGCCGGCGTATCACGACCGCCAGCACCTCAACGGCGCCGCCCTATCAGCCTCCTC GTCACCTTCTCACAAGGCTCCATCATCCAACACCAAGTACTCAGCTCTTGCGGCGGCGTTCCGGCGGGTGGTCGGTGATA TCCTCATGCGGCGGAACAGTCGGAAGGGGCAGTGGCGAAGGGCTGTATACAGGTGCGTGCTCTGTTTCTTCGTAGGGTTT TTGTTAGGGATGTTCCCTTTCGGTCATGTGGTGGTGGAAGAAGAAGACGAAAACAACGTTCCGGTGTCGTTTGAGATCAA GCCGCCGAACTCCGGCGAGATGAAGCGGTTTGTGATTGATCCGGTTGTGAGTTTGAGCGCTGAGAAGCAGAGCCAGAGTT TGGTGGCGGTTGAGCGGTTCGATTTCGTGCCGAGGAAGCTGCTGATTGTGGTCACGCCGACTTACAACCGTGGGTTTCAG TCTTACTTTTTGAATCGGTTGGGTCAGGTGCTGCGGTTGGTGCCGCCGCCGGTTCTGTGGGTGGTGGTGGAAATGAAGGC GGCTTCGTTGGAGACTGCGGAGGTGCTGAGGAAAACGGGTGTGATGTATAGGCATTTGGTGTGCCCTGAGAATTCCACTG ATGTGAAGGACAGAGGGGTTCATCAGAGGAACACAGCGTTGGAGCACATTGAACGCCATAGGCTTGATGGGATTGTTTAC TTTGCAGATGATGATAATGTGTATTCTCTGGACTTGTTTGAGTCACTGAGAGACATAAGTCGCTTTGGAACTTGGCCCGT CGCCATGCTTGCACCGAGCAAGAACAAGGCTGTTTTGGAGGGTCCCGTATGTAATGCAAGTCAAGTGATTGGATGGCATA CAAATGAGAAAAGTAAGAGGCTTCGCAGATTTCATGTGGACATGTCTGGATTTGCATTTAACAGCACAATCTTGTGGGAT CCAAAGCGATGGCAACGCCCTACTTCAAACCCTATAAGACAATTAGACACCGTGAAGGAGGGTTTTCAAGAGACTAGCTT TATAGAACAATTGGTGGAAGATGAGAGTCAAATGGAAGCTTCACCTCATGGTTGTTTGAAAATAATGAATTGGCATCTCC ATTTGGGTGCTCGTGATATAGATTATCCAAAGGGCTGGATGCTTCAGAAAAACCTAGATGCTGTCATACCCATCAAGTAA
Protein sequence (LotjaGi1g1v0413300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASFRRTLSPAYHDRQHLNGAALSASSSPSHKAPSSNTKYSALAAAFRRVVGDILMRRNSRKGQWRRAVYRCVLCFFVGF LLGMFPFGHVVVEEEDENNVPVSFEIKPPNSGEMKRFVIDPVVSLSAEKQSQSLVAVERFDFVPRKLLIVVTPTYNRGFQ SYFLNRLGQVLRLVPPPVLWVVVEMKAASLETAEVLRKTGVMYRHLVCPENSTDVKDRGVHQRNTALEHIERHRLDGIVY FADDDNVYSLDLFESLRDISRFGTWPVAMLAPSKNKAVLEGPVCNASQVIGWHTNEKSKRLRRFHVDMSGFAFNSTILWD PKRWQRPTSNPIRQLDTVKEGFQETSFIEQLVEDESQMEASPHGCLKIMNWHLHLGARDIDYPKGWMLQKNLDAVIPIK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 67 | 67 | - | – | |
| PANTHER | 1 | 397 | 397 | 1.6E-190 | – | |
| PANTHER | 1 | 397 | 397 | 1.6E-190 | ||
| TMHMM | 68 | 90 | 23 | - | – | |
| Phobius | 68 | 92 | 25 | - | – | |
| Phobius | 93 | 399 | 307 | - | – | |
| Gene3D | 145 | 388 | 244 | 2.6E-85 | ||
| CDD | 146 | 375 | 230 | 7.94364E-100 | ||
| SUPERFAMILY | 147 | 392 | 246 | 8.78E-84 | ||
| Pfam | 167 | 374 | 208 | 1.0E-72 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity | Catalysis of the reaction: UDP-glucuronate + 3-beta-D-galactosyl-4-beta-D-galactosyl-O-beta-D-xylosylprotein = UDP + 3-beta-D-glucuronosyl-3-beta-D-galactosyl-4-beta-D-galactosyl-O-beta-D-xylosylprotein. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi1g1v0413300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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