Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0424100 |
| Transcript ID | LotjaGi1g1v0424100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WAT1-related protein; TAIR: AT1G75500.1 Walls Are Thin 1; Swiss-Prot: sp|Q94AP3|WAT1_ARATH Protein WALLS ARE THIN 1; TrEMBL-Plants: tr|A0A0S3RAT5|A0A0S3RAT5_PHAAN WAT1-related protein; Found in the gene: LotjaGi1g1v0424100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:91865638..91869946) extracted from Lotus japonicus Gifu genome v1.2.
GGGAGACAAGCAAAAACATTTGAAGGGTACCAACAGTTATTGTGGGTCATCCCCATTGCTTCTATACTCTCTCTTCACAA TATTTATACCCTCACTCTTCTATCTCCTCTTCATTCCTCCCTTAACCAATTAACTAGACTAGCATCTAGCTAGCTAGACC TCAATTATTTGCTTAATTAGGTCGAATCCAATGGCTGATTCTGCAGGCTCAGCCTCTTCCGGCAGAATGTGGTGCTCTGT CCCTGAACGGCTTCAGCTGCATGGAGCCATGCTGGCCCTGCAATTTGGCTATGCTGGCTTCCATGTTGTCTCAAGAGCTG CCCTTAACATGGGCATTAGCAAACTTGTTTTCCCAGTCTACAGAAACATCATTGCTTTACTTCTTCTCCTTCCTTTTGCT TACTTCTTGGAAAAGTTAGTGCTACATCCTCTAACAAATCAATTCATATATACAATTGACACACATAAAGTGGACAAAAT TGCTAATGTTAGCAACAGTTTGCTTGATTAATTTGCAACTAATGTTAATTTCTTTCACTTTTGTCCAGGAAAGAGAGGCC TGCAATCACTTTAAACTTCCTCTTCCAGTTCTTTCTTCTGGCCCTTGTCGGGTATGTTCCATTTTTACACCACATACAAT TAAAATTAGATCATTGAAAAGAGAGATGAAATTGCTAAAAGCTCAAGGGAGACATTCTGTTTTGTCTTTTTTCAAAAAAT AAATAAATAAAAAAGATTTGATGCTGAGAACCACAAGGTGAAGAAGCTATCTTAAGTAGATGGTCATGGTCCTTATAATT TATATTAATTTTGCATTGCACATACAGGATTACAGCAAACCAAGGTTTCTACTTGCTTGGGTTGGACAACACATCCCCAA CCTTTGCATCGGCCATACAGAACTCTGTCCCAGCCATCACATTTCTCATGGCAGCTATACTCAGGCAAGCCCTTTATTAC TAAATTACTTGTTCTTCAGCCGTTAACTAGGTTATACATGCCTCAGTCTCCATGTACGATAACATTTTTGAAAATTCTTC TACAACCGATTCTCAAGCTAAAATCAATTTCGCATGAAAAAAATTATCGGACTACCTTTTGGGTGCGTGCATGCCGGAAT TGATTTCAGGAAAAAAAAAATGATTCAAACATACTGTCAGATAGTTATAACATGTTTGGTTCACTTTAGAATCACTTATG TTTTGTTAGAAGCTTTATGATAGTTTCAGATTAAACATGTTTCGAATTATGTGAAAATCGTGAAACCAAACACTCATCAT GATTCTAAGCATGTATAGTGACTTTTATTATGTGCAAATTTTGAAAGCAAATGTCCACTTACATAAATTAGAATTACAAT TTCAGGATAGAGCAAGTGCGGTTAAACCGAAAAGATGGGATAGCCAAGGTGGCGGGAACGGTGTTCTGTGTTATCGGGGC AAGTGTGATCACACTCTACAAGGGTCCAACCATATACAGCCCGGTTCCACCTCTCAACAGCATCATCACCCCACATCCAC AGACACAGTTACTTGGCTCAGTCTCACTCTCACTAGGAGATGCTAATGGCAAAAATTGGACCCTTGGATGCCTCTACCTC ATCGGACACTGCTTGTCGTGGTCCGGTTGGCTTGTCCTGCAAGCGCCCATCCTTAAGAAGTACCCGGCACGCCTCTCTGT CACTTCCTATACATGTTTCTTTGGACTCATCCAATTCCTTGTTATTGCTTTGATTGTTGAAAGAGATGCTCAAGCTTGGA TCTTCCATTCTGGTGGAGAAGTTTTCACTATTTTGTATGCGGTTAGTATAACTACTTATCATACTAATAACATATTTGAA TCAATTTTTTTTTGTAGTTGATTTTGACATGCAAAAACTACTTTCAGAAGCTTTTCTTCAAAATTAATTTTGACTACATA ATTAAAATTGTAGATGAGGTCATTGTAATTTGTAAATAAATGTTCGGATATTAAAGTTCATTCACATTGTACTATGATAT GTGAACACACGAGATGTTCCCAGCCTAACTTCATAGGGGAATGAAGAAAGCTGGTCACCTTCTAATAAAAATAAAGTTCT TAAAGTAGACACAGTTTGGCTATAGCTGTTTATGCATATGCGTCTAAGATGTGATATGATATGTATTATGGAAGTTGTTA AGCAATAATGTAGTGAGTGAGATATAATGGTAGGCGTGTGTTTGTGCGTGTGTTGTTGACAATGAAATATACGTGAGAGA GGAGAATTGATGAACTTTTTAAAATTGAGTTTGAAAATTAATTTTATAATGTAAACATTGCATGCAGGGAGTGGTGGCAT CTGGAATTGCCTTCGCTGTACAGATATGGTGCATTGACAGAGGTGGCCCTGTGTTTGTGGCGGTGTATCAACCTGTTCAG ACTCTTGTTGTCGCTATTATGGCTTCCCTTGCTTTAGGCGAAGAGTTCTACTTGGGAGGGTAATGAGTCCTATATATCCA CCTTAATTATCCTCTTAATTTTCTCTCTTTTTTCTTAATTCTAGTTGTTTACTTTTTAATCTCCTTTTTTCACATAATTA TCTCCACTCACTTAATTAAAATTTAATTTTCCCTGCTTGATAACTTTGACTATCCACTTATAATTAACTTTATATATAAA GCTAATAATATTGAGAAGCATCCAAGAGATGAAGGGTACTCTTTCTTGCACCATTTTGAAAACGACAAATGAAAAACCAC TAAATTAAACAGCAAGGAAGCTAGAGATAAGGCAAGGTTTGAACCCTTTCAGTGAGGACTGACGCAAATGCGAAAGGCTA TGACACACGAATGAACACCTTTTTTTTTCTTTTAATGATTAATTCCACCTTCATGGGTTAAAAAATGCTTTAAAAGATTA CTTTTTTCTTGTTTTGCACTTTTTTGCTTTACACTACTTTTTATTTCAAAAGAGAAAAAGAATTGCTTAAAATTTGATTG ATAAATGCCTTTATTGGTGGATGCCAATTTGAGATCCACTCTTTTGTCAAAATTCACACTCATTTTTTTCATTATTTTTT CATCCATCTTTTAATTTGAAGATTATTCATGTACATCCTAGTGAAAAAGTAAGAGAAGAAAGAGATAATATATGCAATAT ATTATAGATGAAAATGAATTTCAAGTAAGGTTTCCTTAATTTAACCGTTAATATGAGTCGTTTGATTATGATCCATTGGT TCAAATTTAAAACATGTATACTGTTTAATCTTGATGAGAAAATCTGAATCAATCAATCTTAATTAGACAATTCAGATTTC TTGATCCCGTGAATGCAGAGTGTGTCTGCATATCAAACTCAAAAGCATTTATATTTTTCTCTGGAATATGAGGTGTTGAC AAACTTTTTACTTTATATATGATGTTATAGGATCATTGGGGCAATATTGATCGTTGTGGGACTATACCTAGTCTTGTGGG GTAAAAACGCAGAGAGGAAGTTTGCTATGGAACATGCAGCGATCATGTCCACTCCGGAGCATAGCAGCATCAGATCCGCA AGTCATGCCAAAACATCACTTACTCAGCCTCTTCTCCCTTCATCAACGGAAAATGTCTAATCATGAAAATCATAGCTAAT AACTTCAATCTGGTTGAGCAAGCATTTTCTTGGACAGTGAAAAGAAAGTAACAAGAGAAGATCAGAAAAAAACGATATCA GTTATACATTACTACTACCCTATGTCAGGAAGCTTGTGTGTGCATGTATGAAAGGGTTTTCATCTTGTCCTGCTTTTGGT TTCTGGTTAATTGATTCAGATGCTTTCTTACTAGGACATTAGATTAAGGTTTATTTTATGGGAATGTTTAGAATGATCGA TACATGTGATCACTTCTGAAATCCCATTGTGCTTTAATTATATGTTAATTAATGGTTTGATTTACAAAAAGAGATTATTT AAGCTATGGTCAATACTGTCGATGCTAGAGATCATTATGACATGGGTGATGGGTGGGAAGGTAATTAGGTGACAGAGACT GTCATGATTTTTCAGACGTGAATTGTTAAATTGTTTCAAAAGCTGGACAAGCATGAAGGTTGTGATAAGTCATAATTGTC ATGCTCAAATGGGATCATCATTTCGGTTGGATTTGATCAATATGATCTCTAATTTTCCATCATTGCTCAAGTTTGAAGAC GACTACTTAATGAGGTGTATGCTGGTATAATCCCAAGCACAAATAACTACACCCACTAGTAGATGTCTCAAATGATAATG TTGAGACAAAACAAGTCTCACGTGGAATAAATTAAGGGGATAACGATGGATTTTGTTAAAATTTAAAAC
CDS sequence (LotjaGi1g1v0424100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGATTCTGCAGGCTCAGCCTCTTCCGGCAGAATGTGGTGCTCTGTCCCTGAACGGCTTCAGCTGCATGGAGCCAT GCTGGCCCTGCAATTTGGCTATGCTGGCTTCCATGTTGTCTCAAGAGCTGCCCTTAACATGGGCATTAGCAAACTTGTTT TCCCAGTCTACAGAAACATCATTGCTTTACTTCTTCTCCTTCCTTTTGCTTACTTCTTGGAAAAGAAAGAGAGGCCTGCA ATCACTTTAAACTTCCTCTTCCAGTTCTTTCTTCTGGCCCTTGTCGGGATTACAGCAAACCAAGGTTTCTACTTGCTTGG GTTGGACAACACATCCCCAACCTTTGCATCGGCCATACAGAACTCTGTCCCAGCCATCACATTTCTCATGGCAGCTATAC TCAGGATAGAGCAAGTGCGGTTAAACCGAAAAGATGGGATAGCCAAGGTGGCGGGAACGGTGTTCTGTGTTATCGGGGCA AGTGTGATCACACTCTACAAGGGTCCAACCATATACAGCCCGGTTCCACCTCTCAACAGCATCATCACCCCACATCCACA GACACAGTTACTTGGCTCAGTCTCACTCTCACTAGGAGATGCTAATGGCAAAAATTGGACCCTTGGATGCCTCTACCTCA TCGGACACTGCTTGTCGTGGTCCGGTTGGCTTGTCCTGCAAGCGCCCATCCTTAAGAAGTACCCGGCACGCCTCTCTGTC ACTTCCTATACATGTTTCTTTGGACTCATCCAATTCCTTGTTATTGCTTTGATTGTTGAAAGAGATGCTCAAGCTTGGAT CTTCCATTCTGGTGGAGAAGTTTTCACTATTTTGTATGCGGGAGTGGTGGCATCTGGAATTGCCTTCGCTGTACAGATAT GGTGCATTGACAGAGGTGGCCCTGTGTTTGTGGCGGTGTATCAACCTGTTCAGACTCTTGTTGTCGCTATTATGGCTTCC CTTGCTTTAGGCGAAGAGTTCTACTTGGGAGGGATCATTGGGGCAATATTGATCGTTGTGGGACTATACCTAGTCTTGTG GGGTAAAAACGCAGAGAGGAAGTTTGCTATGGAACATGCAGCGATCATGTCCACTCCGGAGCATAGCAGCATCAGATCCG CAAGTCATGCCAAAACATCACTTACTCAGCCTCTTCTCCCTTCATCAACGGAAAATGTCTAA
Protein sequence (LotjaGi1g1v0424100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MADSAGSASSGRMWCSVPERLQLHGAMLALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIALLLLLPFAYFLEKKERPA ITLNFLFQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAAILRIEQVRLNRKDGIAKVAGTVFCVIGA SVITLYKGPTIYSPVPPLNSIITPHPQTQLLGSVSLSLGDANGKNWTLGCLYLIGHCLSWSGWLVLQAPILKKYPARLSV TSYTCFFGLIQFLVIALIVERDAQAWIFHSGGEVFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMAS LALGEEFYLGGIIGAILIVVGLYLVLWGKNAERKFAMEHAAIMSTPEHSSIRSASHAKTSLTQPLLPSSTENV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 20 | 20 | - | – | |
| PANTHER | 14 | 371 | 358 | 2.6E-213 | ||
| PANTHER | 14 | 371 | 358 | 2.6E-213 | – | |
| Phobius | 21 | 40 | 20 | - | – | |
| Pfam | 28 | 164 | 137 | 1.1E-13 | ||
| Phobius | 41 | 51 | 11 | - | – | |
| Phobius | 52 | 73 | 22 | - | – | |
| TMHMM | 54 | 73 | 20 | - | – | |
| SUPERFAMILY | 57 | 167 | 111 | 6.02E-11 | – | |
| Phobius | 74 | 84 | 11 | - | – | |
| TMHMM | 80 | 102 | 23 | - | – | |
| Phobius | 85 | 103 | 19 | - | – | |
| Phobius | 104 | 114 | 11 | - | – | |
| TMHMM | 112 | 134 | 23 | - | – | |
| Phobius | 115 | 134 | 20 | - | – | |
| Phobius | 135 | 145 | 11 | - | – | |
| Phobius | 146 | 166 | 21 | - | – | |
| TMHMM | 147 | 166 | 20 | - | – | |
| Phobius | 167 | 205 | 39 | - | – | |
| TMHMM | 205 | 227 | 23 | - | – | |
| Phobius | 206 | 226 | 21 | - | – | |
| Pfam | 208 | 346 | 139 | 1.9E-16 | ||
| Phobius | 227 | 237 | 11 | - | – | |
| Phobius | 238 | 259 | 22 | - | – | |
| TMHMM | 240 | 259 | 20 | - | – | |
| SUPERFAMILY | 249 | 350 | 102 | 6.15E-11 | – | |
| Phobius | 260 | 273 | 14 | - | – | |
| Phobius | 274 | 295 | 22 | - | – | |
| TMHMM | 274 | 296 | 23 | - | – | |
| Phobius | 296 | 301 | 6 | - | – | |
| TMHMM | 301 | 323 | 23 | - | – | |
| Phobius | 302 | 321 | 20 | - | – | |
| Phobius | 322 | 326 | 5 | - | – | |
| Phobius | 327 | 347 | 21 | - | – | |
| TMHMM | 328 | 347 | 20 | - | – | |
| Phobius | 348 | 393 | 46 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0424100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…