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LotjaGi1g1v0428200.1

Overview

Field Value
Gene ID LotjaGi1g1v0428200
Transcript ID LotjaGi1g1v0428200.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Diphthine synthase-like protein; TAIR: AT4G31790.1 Tetrapyrrole (Corrin/Porphyrin) Methylase; Swiss-Prot: sp|O81769|DPH5_ARATH Probable diphthine methyl ester synthase; TrEMBL-Plants: tr|A0A0R4J642|A0A0R4J642_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0428200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:92279528..92285298) extracted from Lotus japonicus Gifu genome v1.2.

TCTTCATCTCCTTTCTTCATAGGGAATGTTTCCAGATCTGCCTCCGTCCCAAGCCGCCATCTTTGCACCATCAAGATCCA CCTTCTCCTCCTTCACCCCCAAATTCCTCCCTTCATTTCACGTTCACATAGAAAAAAGTAAAAAGGAACCACCTTCTCCT CCTTCACCCCCAATCGCTGTCCACGTCGTTCCCCTTTTCATGGGCCGCCGGAGACGTCGTCGACACCTCCCGCCTCGCCG TCATGGGCCTCTCCTTCGCCCTCGAAGAGAGTGAATCAGATGGGAACGCTCTAACGTTGTTGATGCCCAGAGCTAGAAGA AAGCTTCGATCCCAACCACCACTTCTTCTTACTGTATTCAAGCAAGATCTGGGTTTCCCCATTTTTGAATCTGGGTTGTT CTTCCACCCACCTACAGAAAGATCAGAGGAGAGATGAGAGTGGATAACATGTTCCAGATCTTTTTTGTTGGTGATGTTAT GCTCCAGATCTGATGGAGGCTGTGTTTATCAGATCTATTATGTTGGTGGTGGTGACAAATTTGGTGATGGAAGTCATGTC CATCCACGTTAATTTTAAAAAATCTGAACATGATTATAAAATTGAAGAATTTTGGTGATTTATGAGTTTAGGTGTGAAGG CTAGATCAGGTCTTTTTTTTTTCCAGAAGTTGTTGTTCTTCCATGTGGTCATGTCTTCCACAGCACATGTTTACTTTCAG AGCTCATTGATCCTCCTCTATGCCTTAGCCACGTTCTCCGTAGAAATTGGTGATGGGTTTGGGGTTAGGCTATCTAAATT TATAATCTGGGGTCAAATTAATAAATCTATTTACAATTAATTAAAATAGAGAAAAACCGGTTCACTCATCAAAATGGGTT AAACCGGCCTTGTGTAAAGTTGCACAAGGAAAAAACTTGTGCATATTAGGGGATACATCACCCTCAACCATTTGTTTCAT GGAGAGATTCATCAATTTGAAACAAGATTATCACTGTTTCAGCGGAACTGACCTTAGGTTTTATATTTGTAAGTGGCTCT GTTACTTTGTGATACAAACGAGGTGGGACTAAGAACCAATATCAAATGGACCAAATCTAAACCATTTTGCCATAATGTCC TTCCTCTTTGTTACTGTTAACAGTGAACGAGCGGTATTTGAAATCGCGGCGGCGGCGGAAGCAAGTGCAAGTGCCGCAGA AGGAGCAGTCTGCAGCGGAAGCAACGGCAGCATCAGGGTCAATAGAAGATGTTGTACATAATCGGTTTAGGGTTAGGAGA CGAGCGAGACATCACACTGAAAGGATTGGAAGCAGTGAAAAAATGCGACAAGGTTTACATGGAAGCCTACACTTCCCTCC TCTCCTTCGGTCTCTCCACCACCGCGCTCGAGAATCTCTACGGTAAACCCATCGCTCTTGCCGACAGAGAGTTCGTTGAG GAAAAAGCCGACGAGTTCCTCTCCGAAGCTCGCCATGCCGATGTCGCTTTCCTCGTTGTTGGGGACCCTTTTGGGGCTAC CACTCATGCTGATCTCGTTGTTCGAGCGAAGAAGATGGGGATTGATGTGAAAACTGTGCATAATGCTTCAGTGATGAATG CGATTGGGATTTGTGGTCTTCAGCTTTATCGTTATGGGGAGACTGTTTCTATTCCGTTTTTCACTGATACTTGGAGACCT GATAGCTTCTATGAGAAGATTCAGGGGAATCGAAGCATGGGTCTGCACACTCTTTGCTTGTTAGGTTAGCTTGCTTGTTC TTGCTTTCATTGACTTAACTTTGACTAAATTTATTGTCTTCTTGCAATAATTGATGAGAATGTTTTAGTGAAATAATTGT TCAATTGATTGATTCTGAAGCTGATAAGAACGCATCAGAGGAAATGCTGCCCTTTTCTTAAGAATACGGGAATAATAACT TTCAATTTGGTATGGTTGCAGATATTCGGGTGAAGGAGCCTACACTGGAATCTCTGTGCAGGTTGGATTTCAAAGTGTTT TTTGTTTTTCTGTTTTTGCTAATGCAGATTTTAAGGAAACCATTTAGTATGGGTTGCTGAATTTCCCTGGCGATGTTTTT TCTTTGTTCTTATTATATGCTTTTATCTGTATGTCTGTTCTTTGATTCTATTAATGTTTTGCGGTCATTTCAGGGGAAGA AAAGTCTATGAGCCACCCCGATATATGACTGTAAACACAGCCATTGAGCAGCTGTTGGAGATTGGGCAAGCACGTGAAGA ATCTGGTGAGTTCGTTGAGCATTTACATCACTATAGGCATAAATTTCAAACATAAGATTGGTGTCTTGGTTGTACTAGTA TCCAAAGTTATAAACCTTTGAAATTTGATATGGACTTTACTTTATTTGCCGGAGACATGTTATGAAAATTGGTATGTTAT CAAACAGTGGAAGTTCCTCCACCATAAAGGATGAAAATTAAATGATATGTCTTCCTTGTATGTTGAAGATTCAGTACTGC TATCAAACAATTTATCTTCAGTTTTCTCGCCAAATTCATGGCAATTTGTAGCTATTTAATAAGGTTGTCACAAACTTGAT TGGTTGACTTGTAAGAGTTTACCTAAGAAAAAAATAATATTTAAAACACCTGTTATAATGTGTGTGTGCGCGCACGCGTA TGTGTGACTCTCACATTACAAACATTTAACATTTAACATTCTAAGTTCTTAGTAATGGATACCACAATAATGAAGTGTTA AATAGCGTGGAAGCGACCAATAAATCAAAACAAGATTAGTTCATAGCTCTATAACAAACAAAGCATTATAATTCCAAATT TACGGATAAATTCACGAATCATAAGATAGGTTAGTAACTCTGTAGAGCATAATAAGTTCCAAATTGATGTACAAATTGTC AAATCACAAGGTTAACTGAAGAGTGAAAGGTGATTAGACTAGGTTCATCTAGCTGGAGCTGGGTCAGCTCCACAGAGCTA GATTTCACTTGTCATACCTGTGGGCTTCTTTGCCTCATCAGCCTGGTTTCATGTTAACCTTGTCGTAATGAATTTGTTCG TGCCAACTGGTTCATGACTTGGTTCATGTAGGCAGCTATAGGGTTGAGACTCATTACAGCTGCGTTCACATCTTTTTCTG CAAATGCTTCATGCTGGGATGTTGCATGAAATTGTGAAGCCGAGTGCTACAACTGTGATGTTAAGTTTTTGTGCACAATG ACCCTTTATTATTTAATTTCTGCAATTTTTGCTTAAAAAAAAAGAGGAAACATTGTTGATTCGGGCATTTCGGGGAGAAT AACCATTTGGTTGCAGACTCCTTCAATTATTTTCAAACTCACTATTCTATGTGAGTTTATAAGAGTCCATGTGAGCCTGA ATTGACTAAAAAATGAGTCAATAATGAGTTAACTTGAGTTTTTTTACCTAGAAACCGTAAAGTCGTAAACTCAGTTGACA ATTGCGGTTTAGTGTATAGATATAGACGTCAAAGCACTTAATCATCTCAGAGAATTTTTGTTGTGTTCAGAGAGTTCAGA AATTGCAAGATAGTATTAAGGAGTATTAGTCTATTAGAGCCCATAAAACATGAAATCCTTCTCAGTCCAAAGGTGTACAC AGTTCTTATTGGCTACACAAATTTTGCTTTTGTCATATACTTTAAGGGTTGTTGGCTTGTGCTGGATGAACTAGTTCGAG TCTTAGAAATCATTGTCAAATATACTTAATTGTATATTTACTTTTAGCTATTGCCATAGTTTCACAAAATCATTGCTTGT ATCCTAATTTTGACATTTTTACTGTAATATATAGCCCAGGGTTGTCAATAGCGCGCGATAGCGGCGCGGAGGTTGGGCGC GACGCAGGAGGCTGTAGCGGCGCGGAAATCGCGTCGCGGTGGTAGCGGGGGCGATCGCGGCCGAAATCGCGCCTGGTTGA GCGCGATGGCGGCGCGAGGAAGAAAGAGAGATGGAAACCCTAATTTCAGGGCAAAAACCCGAAATTGCCCCCAGTTTTAA ACATTAGGTTAAAAAATTTAAGGGCATTTTGGAGTTTTCCCATCTTTAATGAAACGCTGTGTTTCATCATGTGCAGTGAA AAACCCTACTCTGCGAAGGAAAAGCCCAAATTGCCCCCAGATCTAAACAATCCTTTGAAATTTTAAGGGCATTTTGGGGG TTTCGCACCATTAATTGAAACGCAGCGTTTTGTCTTTCTTCAACCTTCAGCCTCTGCAATCTTCTCCCTTTTTTTTCACG ATGAAACCTGCGATTCCAGCCTCCTTCCTCCTTCTTCCTCCTCCTTCCAGCCTCCTTCTTCCTCCTCCTTCTTCAGCGTA GCGGCCATAGCGCTACACGCTATAGCGCTATAGCGTTTTTTGGCCTTGCCGCTACGCGACGCTATCCGCCATTGACAACA CTGATATAGCCTTGTACTCTAGATTGTTGGCAAGTTAAAATGCTTTGGTTTCAAAGGTTGTTTAGGCCGTTGATATTGAA AACACGAGCATTCAGAAATGATAAGTAATTGAAAGCATTTAATGGAACGTATTAAATAATCCTTTACCAGTGTCCTTAGG GCACTATTAGCAGGACCCTCTATAATTCTGGGCCTTATAATTTTATTTTCATATTTTTCATATTCATGTATTTGTGGATC ATAGATATGTGCGTGTTATAGTATTTGCTGGTCAGGAGCCATCTTCACTGTGATAAGTGTGTGTTTGTATCCTTCACATA TGGTCTGGCTTTTATTTCTAACAACAAAACAACACCTTTTTTTTGCAGCATACACTGAAGATACTGAGTGTGTTGGGTTT GCTCGTCTTGGAAGTGAAGATCAGATGATAGTGGCTGGAACAATGAAGCAGCTGCAGTTGGTTGACTTTGGAGCACCTTT ACATTGCCTTGTCATAACAGGGAAGACCCATCCCTTGGAAGAAGAAATGCTGGATTTTTACAGATGCAGGACGTAGTGTG GTCTTTAGAACAGCAGCTCCATTTTGATTCAGAAAAGACTTGTTTGTTTGTGTTGAAGTAGCCCTAATATCTTGTTCTTC TGTGTAATTTTTTCCTCGTCAATCTGAGCCTAAGTTAGTAAAAAGATAATGTCCTCTTGTAGTATCAATCAATACTCATT CCTGCACTCACTCAAATTACAACACACTTTTTCATCTCCCTGCTGTCATTGTTAAATTTTCTGGGGACTGAGGATTTTCA TCAGAGACCCTCGTAGGCAAAAACACCCTAGAATCAAGCATGGGAAGAGGGGTTGAGAACCACATTGTATTGCAGTTTCT CATGCTTACCGTGGCCCTGGATCTGCTGATAAGAGAATTACAGTATGTTTGGAAGCTCATCCAAGAATCATGTTGAAGCC AAAATTGTGGTGAACAAAGGCTACTTTCCTCAGCTTCTGTAACTGTAGAATCGATTCTGCTTATCTTTTATAAGTCTGCA CTTAAGGTGTGGAAGAGTTTCAAGTAGAAAACAGCCCCTTGTGGCGAAATACAACTTTAGAGATCTATTCACAAAGAATA TTCTTGTTTAGCTACTGTTTTGTTCTTGAGATAAATATTTGGCTTTAGGTCGGGAAAAATATGACATTAGTTTGAACCAA AATTGAAGGTGTGGGGATGCTTTGAAGACCTGTGATGAAATTGTCCGCAAAGTTTTGATGGTATACTTGTGTAGCCCAAG CGTTGCACAGCTTGGGTAAGGCGCACCCTGCCAATTGCCAAATCAAGTTTAAATTTTGCTCTTTATTGTTGGCTTTTTAT AAGTAATTTTC 

CDS sequence (LotjaGi1g1v0428200.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTTGTACATAATCGGTTTAGGGTTAGGAGACGAGCGAGACATCACACTGAAAGGATTGGAAGCAGTGAAAAAATGCGA CAAGGTTTACATGGAAGCCTACACTTCCCTCCTCTCCTTCGGTCTCTCCACCACCGCGCTCGAGAATCTCTACGGTAAAC CCATCGCTCTTGCCGACAGAGAGTTCGTTGAGGAAAAAGCCGACGAGTTCCTCTCCGAAGCTCGCCATGCCGATGTCGCT TTCCTCGTTGTTGGGGACCCTTTTGGGGCTACCACTCATGCTGATCTCGTTGTTCGAGCGAAGAAGATGGGGATTGATGT GAAAACTGTGCATAATGCTTCAGTGATGAATGCGATTGGGATTTGTGGTCTTCAGCTTTATCGTTATGGGGAGACTGTTT CTATTCCGTTTTTCACTGATACTTGGAGACCTGATAGCTTCTATGAGAAGATTCAGGGGAATCGAAGCATGGGTCTGCAC ACTCTTTGCTTGTTAGATATTCGGGTGAAGGAGCCTACACTGGAATCTCTGTGCAGGGGAAGAAAAGTCTATGAGCCACC CCGATATATGACTGTAAACACAGCCATTGAGCAGCTGTTGGAGATTGGGCAAGCACGTGAAGAATCTGCATACACTGAAG ATACTGAGTGTGTTGGGTTTGCTCGTCTTGGAAGTGAAGATCAGATGATAGTGGCTGGAACAATGAAGCAGCTGCAGTTG GTTGACTTTGGAGCACCTTTACATTGCCTTGTCATAACAGGGAAGACCCATCCCTTGGAAGAAGAAATGCTGGATTTTTA CAGATGCAGGACGTAG 

Protein sequence (LotjaGi1g1v0428200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MLYIIGLGLGDERDITLKGLEAVKKCDKVYMEAYTSLLSFGLSTTALENLYGKPIALADREFVEEKADEFLSEARHADVA FLVVGDPFGATTHADLVVRAKKMGIDVKTVHNASVMNAIGICGLQLYRYGETVSIPFFTDTWRPDSFYEKIQGNRSMGLH TLCLLDIRVKEPTLESLCRGRKVYEPPRYMTVNTAIEQLLEIGQAREESAYTEDTECVGFARLGSEDQMIVAGTMKQLQL VDFGAPLHCLVITGKTHPLEEEMLDFYRCRT 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 270 270 1.6E-140
Gene3D 1 113 113 1.1E-45
CDD 1 256 256 8.9943E-143
Hamap 1 270 270 27.628
PANTHER 1 270 270 1.6E-140
PIRSF 1 271 271 1.8E-106
TIGRFAM 1 265 265 8.5E-100
Pfam 1 238 238 1.6E-24
SUPERFAMILY 1 267 267 1.18E-65
Gene3D 114 271 158 4.4E-72

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Diphthine synthase activity Catalysis of the reaction: S-adenosyl-L-methionine + 2-(3-carboxy-3-aminopropyl)-L-histidine = S-adenosyl-L-homocysteine + 2-(3-carboxy-3-(methylammonio)propyl)-L-histidine.
Molecular function Methyltransferase activity Catalysis of the transfer of a methyl group to an acceptor molecule.
Biological process Peptidyl-diphthamide biosynthetic process from peptidyl-histidine The modification of peptidyl-histidine to 2'-(3-carboxamido-3-(trimethylammonio)propyl)-L-histidine, known as diphthamide, found in translation elongation factor EF-2. The process occurs in eukaryotes and archaea but not eubacteria.

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0428200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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