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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0428200 |
| Transcript ID | LotjaGi1g1v0428200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Diphthine synthase-like protein; TAIR: AT4G31790.1 Tetrapyrrole (Corrin/Porphyrin) Methylase; Swiss-Prot: sp|O81769|DPH5_ARATH Probable diphthine methyl ester synthase; TrEMBL-Plants: tr|A0A0R4J642|A0A0R4J642_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0428200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:92280331..92284050) extracted from Lotus japonicus Gifu genome v1.2.
ATGTTGTACATAATCGGTTTAGGGTTAGGAGACGAGCGAGACATCACACTGAAAGGATTGGAAGCAGTGAAAAAATGCGA CAAGGTTTACATGGAAGCCTACACTTCCCTCCTCTCCTTCGGTCTCTCCACCACCGCGCTCGAGAATCTCTACGGTAAAC CCATCGCTCTTGCCGACAGAGAGTTCGTTGAGGAAAAAGCCGACGAGTTCCTCTCCGAAGCTCGCCATGCCGATGTCGCT TTCCTCGTTGTTGGGGACCCTTTTGGGGCTACCACTCATGCTGATCTCGTTGTTCGAGCGAAGAAGATGGGGATTGATGT GAAAACTGTGCATAATGCTTCAGTGATGAATGCGATTGGGATTTGTGGTCTTCAGCTTTATCGTTATGGGGAGACTGTTT CTATTCCGTTTTTCACTGATACTTGGAGACCTGATAGCTTCTATGAGAAGATTCAGGGGAATCGAAGCATGGGTCTGCAC ACTCTTTGCTTGTTAGGTTAGCTTGCTTGTTCTTGCTTTCATTGACTTAACTTTGACTAAATTTATTGTCTTCTTGCAAT AATTGATGAGAATGTTTTAGTGAAATAATTGTTCAATTGATTGATTCTGAAGCTGATAAGAACGCATCAGAGGAAATGCT GCCCTTTTCTTAAGAATACGGGAATAATAACTTTCAATTTGGTATGGTTGCAGATATTCGGGTGAAGGAGCCTACACTGG AATCTCTGTGCAGGTTGGATTTCAAAGTGTTTTTTGTTTTTCTGTTTTTGCTAATGCAGATTTTAAGGAAACCATTTAGT ATGGGTTGCTGAATTTCCCTGGCGATGTTTTTTCTTTGTTCTTATTATATGCTTTTATCTGTATGTCTGTTCTTTGATTC TATTAATGTTTTGCGGTCATTTCAGGGGAAGAAAAGTCTATGAGCCACCCCGATATATGACTGTAAACACAGCCATTGAG CAGCTGTTGGAGATTGGGCAAGCACGTGAAGAATCTGGTGAGTTCGTTGAGCATTTACATCACTATAGGCATAAATTTCA AACATAAGATTGGTGTCTTGGTTGTACTAGTATCCAAAGTTATAAACCTTTGAAATTTGATATGGACTTTACTTTATTTG CCGGAGACATGTTATGAAAATTGGTATGTTATCAAACAGTGGAAGTTCCTCCACCATAAAGGATGAAAATTAAATGATAT GTCTTCCTTGTATGTTGAAGATTCAGTACTGCTATCAAACAATTTATCTTCAGTTTTCTCGCCAAATTCATGGCAATTTG TAGCTATTTAATAAGGTTGTCACAAACTTGATTGGTTGACTTGTAAGAGTTTACCTAAGAAAAAAATAATATTTAAAACA CCTGTTATAATGTGTGTGTGCGCGCACGCGTATGTGTGACTCTCACATTACAAACATTTAACATTTAACATTCTAAGTTC TTAGTAATGGATACCACAATAATGAAGTGTTAAATAGCGTGGAAGCGACCAATAAATCAAAACAAGATTAGTTCATAGCT CTATAACAAACAAAGCATTATAATTCCAAATTTACGGATAAATTCACGAATCATAAGATAGGTTAGTAACTCTGTAGAGC ATAATAAGTTCCAAATTGATGTACAAATTGTCAAATCACAAGGTTAACTGAAGAGTGAAAGGTGATTAGACTAGGTTCAT CTAGCTGGAGCTGGGTCAGCTCCACAGAGCTAGATTTCACTTGTCATACCTGTGGGCTTCTTTGCCTCATCAGCCTGGTT TCATGTTAACCTTGTCGTAATGAATTTGTTCGTGCCAACTGGTTCATGACTTGGTTCATGTAGGCAGCTATAGGGTTGAG ACTCATTACAGCTGCGTTCACATCTTTTTCTGCAAATGCTTCATGCTGGGATGTTGCATGAAATTGTGAAGCCGAGTGCT ACAACTGTGATGTTAAGTTTTTGTGCACAATGACCCTTTATTATTTAATTTCTGCAATTTTTGCTTAAAAAAAAAGAGGA AACATTGTTGATTCGGGCATTTCGGGGAGAATAACCATTTGGTTGCAGACTCCTTCAATTATTTTCAAACTCACTATTCT ATGTGAGTTTATAAGAGTCCATGTGAGCCTGAATTGACTAAAAAATGAGTCAATAATGAGTTAACTTGAGTTTTTTTACC TAGAAACCGTAAAGTCGTAAACTCAGTTGACAATTGCGGTTTAGTGTATAGATATAGACGTCAAAGCACTTAATCATCTC AGAGAATTTTTGTTGTGTTCAGAGAGTTCAGAAATTGCAAGATAGTATTAAGGAGTATTAGTCTATTAGAGCCCATAAAA CATGAAATCCTTCTCAGTCCAAAGGTGTACACAGTTCTTATTGGCTACACAAATTTTGCTTTTGTCATATACTTTAAGGG TTGTTGGCTTGTGCTGGATGAACTAGTTCGAGTCTTAGAAATCATTGTCAAATATACTTAATTGTATATTTACTTTTAGC TATTGCCATAGTTTCACAAAATCATTGCTTGTATCCTAATTTTGACATTTTTACTGTAATATATAGCCCAGGGTTGTCAA TAGCGCGCGATAGCGGCGCGGAGGTTGGGCGCGACGCAGGAGGCTGTAGCGGCGCGGAAATCGCGTCGCGGTGGTAGCGG GGGCGATCGCGGCCGAAATCGCGCCTGGTTGAGCGCGATGGCGGCGCGAGGAAGAAAGAGAGATGGAAACCCTAATTTCA GGGCAAAAACCCGAAATTGCCCCCAGTTTTAAACATTAGGTTAAAAAATTTAAGGGCATTTTGGAGTTTTCCCATCTTTA ATGAAACGCTGTGTTTCATCATGTGCAGTGAAAAACCCTACTCTGCGAAGGAAAAGCCCAAATTGCCCCCAGATCTAAAC AATCCTTTGAAATTTTAAGGGCATTTTGGGGGTTTCGCACCATTAATTGAAACGCAGCGTTTTGTCTTTCTTCAACCTTC AGCCTCTGCAATCTTCTCCCTTTTTTTTCACGATGAAACCTGCGATTCCAGCCTCCTTCCTCCTTCTTCCTCCTCCTTCC AGCCTCCTTCTTCCTCCTCCTTCTTCAGCGTAGCGGCCATAGCGCTACACGCTATAGCGCTATAGCGTTTTTTGGCCTTG CCGCTACGCGACGCTATCCGCCATTGACAACACTGATATAGCCTTGTACTCTAGATTGTTGGCAAGTTAAAATGCTTTGG TTTCAAAGGTTGTTTAGGCCGTTGATATTGAAAACACGAGCATTCAGAAATGATAAGTAATTGAAAGCATTTAATGGAAC GTATTAAATAATCCTTTACCAGTGTCCTTAGGGCACTATTAGCAGGACCCTCTATAATTCTGGGCCTTATAATTTTATTT TCATATTTTTCATATTCATGTATTTGTGGATCATAGATATGTGCGTGTTATAGTATTTGCTGGTCAGGAGCCATCTTCAC TGTGATAAGTGTGTGTTTGTATCCTTCACATATGGTCTGGCTTTTATTTCTAACAACAAAACAACACCTTTTTTTTGCAG CATACACTGAAGATACTGAGTGTGTTGGGTTTGCTCGTCTTGGAAGTGAAGATCAGATGATAGTGGCTGGAACAATGAAG CAGCTGCAGTTGGTTGACTTTGGAGCACCTTTACATTGCCTTGTCATAACAGGGAAGACCCATCCCTTGGAAGAAGAAAT GCTGGATTTTTACAGATGCAGGACGTAGTGTGGTCTTTAG
CDS sequence (LotjaGi1g1v0428200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGTACATAATCGGTTTAGGGTTAGGAGACGAGCGAGACATCACACTGAAAGGATTGGAAGCAGTGAAAAAATGCGA CAAGGTTTACATGGAAGCCTACACTTCCCTCCTCTCCTTCGGTCTCTCCACCACCGCGCTCGAGAATCTCTACGGTAAAC CCATCGCTCTTGCCGACAGAGAGTTCGTTGAGGAAAAAGCCGACGAGTTCCTCTCCGAAGCTCGCCATGCCGATGTCGCT TTCCTCGTTGTTGGGGACCCTTTTGGGGCTACCACTCATGCTGATCTCGTTGTTCGAGCGAAGAAGATGGGGATTGATGT GAAAACTGTGCATAATGCTTCAGTGATGAATGCGATTGGGATTTGTGGTCTTCAGCTTTATCGTTATGGGGAGACTGTTT CTATTCCGTTTTTCACTGATACTTGGAGACCTGATAGCTTCTATGAGAAGATTCAGGGGAATCGAAGCATGGGTCTGCAC ACTCTTTGCTTGTTAGATATTCGGGTGAAGGAGCCTACACTGGAATCTCTGTGCAGGGGAAGAAAAGTCTATGAGCCACC CCGATATATGACTGTAAACACAGCCATTGAGCAGCTGTTGGAGATTGGGCAACCCAGGGTTGTCAATACATACACTGAAG ATACTGAGTGTGTTGGGTTTGCTCGTCTTGGAAGTGAAGATCAGATGATAGTGGCTGGAACAATGAAGCAGCTGCAGTTG GTTGACTTTGGAGCACCTTTACATTGCCTTGTCATAACAGGGAAGACCCATCCCTTGGAAGAAGAAATGCTGGATTTTTA CAGATGCAGGACGTAG
Protein sequence (LotjaGi1g1v0428200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLYIIGLGLGDERDITLKGLEAVKKCDKVYMEAYTSLLSFGLSTTALENLYGKPIALADREFVEEKADEFLSEARHADVA FLVVGDPFGATTHADLVVRAKKMGIDVKTVHNASVMNAIGICGLQLYRYGETVSIPFFTDTWRPDSFYEKIQGNRSMGLH TLCLLDIRVKEPTLESLCRGRKVYEPPRYMTVNTAIEQLLEIGQPRVVNTYTEDTECVGFARLGSEDQMIVAGTMKQLQL VDFGAPLHCLVITGKTHPLEEEMLDFYRCRT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 270 | 270 | 9.1E-139 | – | |
| Gene3D | 1 | 113 | 113 | 1.1E-45 | ||
| CDD | 1 | 256 | 256 | 1.22043E-141 | ||
| PANTHER | 1 | 270 | 270 | 9.1E-139 | ||
| PIRSF | 1 | 271 | 271 | 2.1E-105 | ||
| TIGRFAM | 1 | 265 | 265 | 2.0E-98 | ||
| Hamap | 1 | 270 | 270 | 27.454 | ||
| Pfam | 1 | 238 | 238 | 1.5E-23 | ||
| SUPERFAMILY | 1 | 267 | 267 | 6.41E-65 | ||
| Gene3D | 114 | 271 | 158 | 9.7E-71 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Diphthine synthase activity | Catalysis of the reaction: S-adenosyl-L-methionine + 2-(3-carboxy-3-aminopropyl)-L-histidine = S-adenosyl-L-homocysteine + 2-(3-carboxy-3-(methylammonio)propyl)-L-histidine. | ||
| Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. | ||
| Biological process | Peptidyl-diphthamide biosynthetic process from peptidyl-histidine | The modification of peptidyl-histidine to 2'-(3-carboxamido-3-(trimethylammonio)propyl)-L-histidine, known as diphthamide, found in translation elongation factor EF-2. The process occurs in eukaryotes and archaea but not eubacteria. |
Expression pattern of LotjaGi1g1v0428200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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