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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0435000 |
| Transcript ID | LotjaGi1g1v0435000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transducin/WD-like repeat-protein; TAIR: AT1G20540.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q6NPN9|DWA2_ARATH WD repeat-containing protein DWA2; TrEMBL-Plants: tr|I1JSW6|I1JSW6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0435000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:92941332..92947533) extracted from Lotus japonicus Gifu genome v1.2.
GAAAGCCCGTTGGAACTACTGTGGATCCCTCTCACAATACCATCTGCAAGCCCACAACATAGCTTCAGAAAAAAGAAAGA AAAAAAACTAGCTACAGCAAGCACGAGCTAGCAGAAGCAAAGACGCATTGCCATTCTGGGTTGAACTCTTCGGGCATTGA GTGTGGCGTAGTAGAATCAGCAGCGTCCTTGTAGCAAGCAAGAGCAATGCAAGCTGCTTCATCAGGAATCGGATACGGTC TAAAATATCAGGTCAATTTCACAACAACCAATCATCATTCCCAGTTTCCAATGATCTAACATTCTAACTATTCCAATTTC TTTCATTCTCTAATTCGATACCAGGCTAGATGCATATCGGATGTAAAAGCAGACACAGATCACACTAGCTTCCTCGCCGG CACTCTCAGCCTCAAAGAAGAAAATGAGGTACATAGTCTAGTTTTCGTTGTTAATTTCTCATGGAAGCTTCATAGAATTT GATCTGAATTGGCAAACAGTGAATCGTTATATTATCATATCACTACAGGTTCATCTGATTAGGCTTTCGTCGAGTGGAAC TGAACTGTTCTGTGAGGGATTGTTTTCGCACCCGAACGAGATCTGGGACCTTGTTTCCTGCCCTTTTGATCAGCGAATCT TCTCAACCGTCTACTCTAATGGTTGGTAATCATGTCCACCTGCATTTGTTTGTGAATTATTTTTAGTCATATTATTGAGA TTGCGATAGCTTGTGCTTCTTGTGCATCATTTTAACACTCCTAGTTAGATAGAAAGACTTGTGTTGCTGATGGATGATGG TGTTGATGTTCATATAAAAAGGCGAATCGTATGGAGCAGCTATATGGCAGATCCCGGAGTTATATGGCGAGTTAAATTCC CCTCAGCTAGAGAGAATCACATCGCTTGACACTGATGCTTCTAAGATTAAATGGTGAGTTTGCAGCTCCCTTATGCAGAT TTATTCGATTCGGACTCCGGTCGGCTTTATAATAGCTTCTATTATATGTTATCGCATTGCCAAGAGTTTAGGTTGGTGTC AGAAGATGTTTTGATGAAATTTATGTGGAGAAACATAGTTAAATTTAAATGTTGTTTTTAAGCAAGGTATAATTTCCCTA GTTTACATCATTGGATTACACTTTTGGCTATCTCATCGAATCCGCTGCTTATATAATTTAATGACTTTACTGTTTACTAT TTGGTCATTACACAATTTGAAATTTGATGCATTGATTTATTTGGTCTTTCTTACTAAATATTCACCACTGAACAGCATTC TTTGGTGGCCATCTGGAAGGCATGATAAATTGATCAGCATTAATGAGGAAAACTTGTGCTTGTGGAATTTGGATGTTTCC AAGAAAACTGCACAGGTAAGAAACTCATAGCGTAGAAAAAAGATTCATAGAGGCATACAAATGCATATTGGTTTGAAATC ACATGTTATTCCTACTCATGTTACCATCCTTTGTCATAGTAAACTAATAAATTAATCCTTACGAGGAGGAGTAAAACATT ATGATTCTCATCATGTTATTTGAGTGAGGGACATTATAGAGAATGAAGGGTTGAAGATGAGTGAAGATATTGGTAAAGAG ATCCCCCCCCAAACAAATGTTAATCTGTGATGCTTCAGTCTGTGGTGAAAATGACTAAGAAATTGATTACGCACTGCCCA CTATGAATTTAATTTTGTTCCTTAAGAGTGATTGCGAGCTTAAATGCAAGTCAAACACAACACAGTTTAATCTTAAGTTG TGTAAAATAACATTGCATGTAACTGTAATTCACAACTTTAGGGCTTACGATCTGTGTTGGGATGTTGACATTCATAGGCT TTTGTGATCACGGTCAATACTATTCATAAATGCCAGAGTTTATGTTGATTTTGGCTTAGTCGTCCTCCCCCTCTCAACGC GTATGAACGAAAAAATTTCCAGGTACAATCTAAAGATTCAGCTGGTGTGCTGCACAAGTTATCAGGAGGGGCATGGGATC CGCATGATGTGAATTCTGTTGCTGCAACTTGTGAATCATATCTCCAGTTTTGGGATGTCAGAACAATGAAGTATGTATTA TCCATAATGTCATTTATTCTTTTACAGGTTTATTACATGATAATATTCTACCATGGTGGAATTGGACACAAATGTGATAT TAGGATTGCATGTTTTTTTTGTCCTTGAGGAAAGATGTTGTTTTTTTTTTTTGAACTTTGAATCATACAGTCATATGATA TGATATTCGGGACCTGATCCATCATTCAGTGTTCCTTAATCTTGACAAGTCTATGCATTTGCAACTATGTTCTTCATTCT GGATATAAACTACTTGTTTCATTTAAAGTTCGGAATTGGAGGTGCTGGGAGACGGATATATTCCCTGCAGCCAACTAGTT CTTAGGTTAATTGGTATCCTTGTGGTTTCTTGTCTTCTAATAGGATTCTTTAAATTACAGGAAGACTAATTCAATTGAGT GTTCCCATGTATGCGGTGTTGATTACGATCCTTGCAAGAAGCACATACTTGTAAGAGTTGAACTTCTTCATTGTATTGAT ATGTGTGTTTTTACCTTCCTTTGAAAATGATTTTATAACCTGTGTCTGAGATAATTTGTTAGAATATATTTCTGAAATTC ACATATGATTTTGCATCGATTGTCAACATTGGTTGCTGACATTCAATTACATTACAGAGTGGATGGCTCTTTTTCCTTTT GTTTTCCTAGTGTTAAAATACTTTATTTTGCATGGCATGATTTTTCTAAATTTAATTACACATTGAATTTACAGCAGCGA CTGTCTTATCAGATGGCGGTATTCTACCACCTTTTGTTTATTCTGGCTAAATTGAATTGGTGTTTTGTACAGGTTACTGC AGAACATGAGTCTGGGATACATGTTTGGGATCTAAGAAATCCGAAAGTTCCCCTCCAAGAGCTTCCAGGACATACACATT GGTACCTATCATGTACAGTATTGCAAAACTGCTTTTGATTTTTGGCTATATTTCCAGACCAGAACGCTACTGTGCTACAA TTTCCAATCAATCCCCTATGAAAAAAAGGAAAAAAATTAAATTAATAAAGAAAAGCAGAGGGGGGGGGGGGGGGAACAAC TGCTGCTTTATTTCATTCCATCATTTATGATGATTGATTGATGCACAATAAGCGACTGTTTTATTTCATTAGAATATCCT TTATTTTTTTTTCAGACATCTGATTAGCAATATGTATTTCTTGTAATGCCAGGACATGGAGTGTCAAGTGTAACCCAGAG TATGATGGAATGATCCTGGTTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATACACATGGATG AGGTTCATCTAAAATGAGCTTTTTTTTAGATTGAGCAAGTTTGGGTGTATCTACTACCCTTAATTTATTTCAAATTGCAT CTTCATGGTAACATATTTGAGTGTGGATTTACCCTTACTTGCTCAATTTAGCGATAAGATTTATTTGAAGGAGCTTTTTT CACATGCTCACACGCTTCTGCGCTCACTTGGAAAAACACAAACACAAAAACAAGCACACTTGATGACTTTTGTTGCTAGT GTTCATTTGTTGGTGTGTGAAAGGTGGTCTGTATTCTAAATATTCATGTTATGGGGCTGTTTAGTTATGTGTCATGAAAT GTCGACATTACAGAGTGCGGGTACAGATTCAGCTGTTAACTTGTGGCTTGCTTCTACAAACCTTGATGAGTTAACAACTG AAAGGTCAGTTTCTTATCTTATATGTTTATACAATTTTTATATGACCGCTTATATTTTTTATTCATCTATGCTTGCATTT TTGGCAGTCAAGCAGATTCGTCTTCCCGTTGGGTTGATCCATTACTTAATACATACAGTGATTATGAAGACAGCATTTAT GGTAAGAGCTGCAAAATTTTTAATCTTTGATCATCGTAGACTTTTACTTAGCAATTTTTAATTCATTTACAGGGCTCACA TGGAGTTCTCGTGAACCATGGATCTTTGCATCATTATCTTATGATGGCAGGGTAAGACCACAAGCCAATCTTTATGTTTA TATTTCTAGGAACCATTTTTTTAAGGGAAATAATTGCTCCATCTCCTCAATAGCTCTTACAGAACCAGTAAGTAGCCAAT AACAGCGATTATTTTCCGAAAGTAAATTAATCTAAAAAATACACCCTTATTCCCAATGTTAGTTGAAATAAATTTGCTTC CTGAAAAAATACTTATTTAAGATTAAACTTTTTATAATGCCTACATTACATTGCCTAGCTTCATCATGCTTATTATATTG TGCTTATGTCTATGGTCTTCACCGCCAGTTAGCCCAACATCCAGCATGCTATGACCCCAAAAATTTTAGTTCTGTCTGAC CTGAATTTATAGCACTATGAACAAATAGTACTGAAGTTCAAGGGGCTAGTCTTTCTCACTTTCTTATATCATACTGTTGC AAGCTTCAATTAGGTAATGAATTTCCTTTTAGCTGAGGTGCCAATAGGTGCATGTGGTCATGAGATCAGACTACTTAGTC AAACACTTGAACTTATGAAGGAAAGTAATTCCCTTTTTTATGATTTTCCCTCTGATTAGGGCTACAGTATAACATTCTAA ATCAATGGCTTTGTCTAAACCGAGATAATTATTTGATGGTCTTCTTGTGCAACTTGTCTACAGTAATCAATAGTCATCTT GTTAATTTGACATTTATTTTTAAAAACAGGTTGTTGTGGAATCCGTTAAGCCTTTCATCTCCAAAAAATGAAGTTCCACA CCTATTCCTTTGTTGCTACCATTTGTCATCTTCTCGTGTATGTCGGTACTTTCTGCCTCTCGGGTCTTGAGATACATAGT CCTTGGAAAACCCAACATGTAACCGTTGGTGGGTTTGATGTGGCTGAATAGTTTAAATGTTTGAATATGCAAGGCATCTT TGATCAGGAATCATTGATAGTTCACAAATCAACATTTTTTTTAATCTTTTGACATTGAAATCATTTCTAGGTTGAACTAT GTTTCTAGCCTTGGTTAGACAATACACATCCTTTTTGTGTAATTCATGGAGTCATTGTGTAATCTATGGAACTGCAAGCT CTTTCTGTATAAACTTAATTTTCTTCTAACATATTTAACTTTAAGTTCATTCGTATTATACTTAACTGGTACAGAAAATT CAATCAGATTATAGTTAATCAGTTTCTTCAATAGATTTCCCTTGTGGAACCTTCTATTCCTATAAAGTTGGATTTGCATG ACCTCAAAGGCAGTGTCATGAGTTTAAGAGCAGCTAGTGGATTAAAGTGGGTGGCTGAGGAAATGGGAAGAGTATAGGAG GCCTGTGTTGATTTTGCCTTGCCTTGCCCTGCCCTGTTCATATGGGACCCCTCTTCAAAATGGATATAGTGGGTCTGAGA GATCTCACTTCCTAGCTGACCTGTTTTCCCCTGCCACTTAAAGGGCTTCATAACCACGAGTTTTGTGTCACATTTTCATA CCACGTCAGCGCGCATTCATTTTGAGTCAGCTTCTCTTTATCCACAAATTCTAATTCCAATTGTCAACAGGTGCTTTGAC GTGTCCTCGTGGCATATTTGAAGGACACGTGCAAGGGCAACCTTAACAAAGTGTGGAAGGGAAAGGTGCGAGCATTTCTG AGTGACTAGACAAAGTGTGGAAGGTTGGGTTGTGGATAAGATGAGAGGACTTTTTTGCTTTCCAACGGGATTTGAGTCTA CTTTTCTTTTCTGTCGTGTCGGTGTATCCTGCGAATATTTGATTCTCTAGATTCTTCTGATTAAAAATTGAAAATTTATA TGATATGTGGATAATGATATATACACACCTCATATGTTATACACTTCATTTTCACCTATTTTTATTTCTATCTTTCTCCT CTTATCATTTATCATATCTTATACTTTCTCTCTCTTATTTTTTCTTTTCTTCCTATCTCTCTCATCCTCCACCTCTTTCC ACCTCATAGATGAGGTGTGGACAAATAATTGTCCATGATATGTTGATGGGCGTGTGATGCGGCATGCTTGGATGGAAAAT GTTCTTCCACATACCAATTTCACCCCATCCAATCGATAGATCAAAAATAGAAGAGGAGAAGTGAAGAATGAAGATATAAT GAGTTATATTAAGGAAAAAGATACGATAGGATATAAAGAGAA
CDS sequence (LotjaGi1g1v0435000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAAGCTGCTTCATCAGGAATCGGATACGGTCTAAAATATCAGGCTAGATGCATATCGGATGTAAAAGCAGACACAGA TCACACTAGCTTCCTCGCCGGCACTCTCAGCCTCAAAGAAGAAAATGAGGTTCATCTGATTAGGCTTTCGTCGAGTGGAA CTGAACTGTTCTGTGAGGGATTGTTTTCGCACCCGAACGAGATCTGGGACCTTGTTTCCTGCCCTTTTGATCAGCGAATC TTCTCAACCGTCTACTCTAATGGCGAATCGTATGGAGCAGCTATATGGCAGATCCCGGAGTTATATGGCGAGTTAAATTC CCCTCAGCTAGAGAGAATCACATCGCTTGACACTGATGCTTCTAAGATTAAATGCATTCTTTGGTGGCCATCTGGAAGGC ATGATAAATTGATCAGCATTAATGAGGAAAACTTGTGCTTGTGGAATTTGGATGTTTCCAAGAAAACTGCACAGGTACAA TCTAAAGATTCAGCTGGTGTGCTGCACAAGTTATCAGGAGGGGCATGGGATCCGCATGATGTGAATTCTGTTGCTGCAAC TTGTGAATCATATCTCCAGTTTTGGGATGTCAGAACAATGAAGAAGACTAATTCAATTGAGTGTTCCCATGTATGCGGTG TTGATTACGATCCTTGCAAGAAGCACATACTTGTTACTGCAGAACATGAGTCTGGGATACATGTTTGGGATCTAAGAAAT CCGAAAGTTCCCCTCCAAGAGCTTCCAGGACATACACATTGGACATGGAGTGTCAAGTGTAACCCAGAGTATGATGGAAT GATCCTGAGTGCGGGTACAGATTCAGCTGTTAACTTGTGGCTTGCTTCTACAAACCTTGATGAGTTAACAACTGAAAGTC AAGCAGATTCGTCTTCCCGTTGGGTTGATCCATTACTTAATACATACAGTGATTATGAAGACAGCATTTATGGGCTCACA TGGAGTTCTCGTGAACCATGGATCTTTGCATCATTATCTTATGATGGCAGGGTTGTTGTGGAATCCGTTAAGCCTTTCAT CTCCAAAAAATGA
Protein sequence (LotjaGi1g1v0435000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQAASSGIGYGLKYQARCISDVKADTDHTSFLAGTLSLKEENEVHLIRLSSSGTELFCEGLFSHPNEIWDLVSCPFDQRI FSTVYSNGESYGAAIWQIPELYGELNSPQLERITSLDTDASKIKCILWWPSGRHDKLISINEENLCLWNLDVSKKTAQVQ SKDSAGVLHKLSGGAWDPHDVNSVAATCESYLQFWDVRTMKKTNSIECSHVCGVDYDPCKKHILVTAEHESGIHVWDLRN PKVPLQELPGHTHWTWSVKCNPEYDGMILSAGTDSAVNLWLASTNLDELTTESQADSSSRWVDPLLNTYSDYEDSIYGLT WSSREPWIFASLSYDGRVVVESVKPFISKK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 349 | 349 | 1.7E-186 | – | |
| PANTHER | 1 | 349 | 349 | 1.7E-186 | ||
| Gene3D | 14 | 349 | 336 | 6.6E-43 | ||
| SUPERFAMILY | 18 | 340 | 323 | 4.76E-28 | ||
| SMART | 55 | 97 | 43 | 350.0 | ||
| SMART | 109 | 149 | 41 | 68.0 | ||
| ProSiteProfiles | 164 | 290 | 127 | 11.708 | ||
| SMART | 199 | 237 | 39 | 13.0 | ||
| SMART | 241 | 281 | 41 | 0.0025 | ||
| ProSiteProfiles | 248 | 280 | 33 | 9.005 | ||
| SMART | 302 | 342 | 41 | 6.3 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0435000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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