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LotjaGi1g1v0436200.3

Overview

Field Value
Gene ID LotjaGi1g1v0436200
Transcript ID LotjaGi1g1v0436200.3
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Catalase; TAIR: AT4G35090.3 catalase 2; Swiss-Prot: sp|O48561|CATA4_SOYBN Catalase-4; TrEMBL-Plants: tr|A0PG71|A0PG71_LOTJA Catalase; Found in the gene: LotjaGi1g1v0436200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:93052338..93056442) extracted from Lotus japonicus Gifu genome v1.2.

GTGATGATGATGCAGCACCGGCCATCTAGCGCCTTCAACTCTCCCTTCTGGACAACCAATTCCGGTGCTCCTGTATGGAA CAACAACAACTCTATGACTGTTGGAGTTAGAGGTATATATCATCTTAACCATCTTTCTCTAATTCCAGGGTCTTGGTTGT GTAGGGAAGGATTTGAACTGTGATGATGTTGTTCTACTTTCTATTGGGATGAGCTTGCTATTTAACGTAATTTGATATGA ATTTGGAGGGATATCATTTTGTTAATCAGCTATCACTGTTGTTAATTATTATAACCTGCTGAATGTTCAGATTGTAAAAC CAAGCGGCACATTTATATTTTGTTGCTTCACTCATATTAGAGAAAAATATATATGTTCATGCATACTTTGGTCTTTTCTT CCATTTATCTATGATAAGCAGTGTTGTGCGGATACCGCGGTATAGCATAGCGCCCTTAGCGTTCTAAGGGCTCATTGCTA CCGTCTGCGGTAACTGTTGTTTGATGCTATTTTCTGCTCTAAGGGCTAGACATAACAGATTTTTGTTTTTCCACGATCCG CGATTAACAAACTGGTGATAAGCAGAAAATAAAAACCCTTTTCTGAGCTTGTGTGAGAGAGGAGTATCTTGGTCAATTTG GTTTCCTTTTGTTGTTACCTTGGATTTTTTTGGTGCTGGAGGGGAGGGGCTTTTCTGTCTGTCTCTTGTAAAGTTCAGAG TGAGTGGGTGAATACTATTTAATCAGAAGTTTTATATTATTTTACCTCCTTTTGGCAGGTCCTATTCTCCTTGAGGATTA TCATCTTGTGGAAAAGCTTGCAAACTTTGATAGGGAAAGGATCCCAGAACGTGTTGTCCATGCTAGGGGAGCTAGTGCAA AGGGTTTCTTTGAAGTCACACATGATGTTTCTCACCTGACATGTGCAGATTTCCTTCGAGCCCCTGGAGTTCAGACACCT ATCATTCTCCGTTTCTCGACTGTCATTCATGAGCGTGGTAGCCCTGAAACCTTGAGGGATCCTCGTGGTTTTGCTGTGAA GTTTTACACCAGAGAGGTAGACATTTATAACTACATAGCATTAGCTTCTGGTGACTGAGTACAATTTCTGTTTTATTCTG TTTTAGTTGCTGAAATGCTGGCTTTTATTTTTCTAGTTTCAACACAAACCATACAAGTCTAAAATTCCTAATTCCTATTA CAATTTAACTCCAAATATAGCATGTACAGCAAACAATTTTGTCTAGATATTGAGTTATAGCCTTATAGGATTACCTGGGA AGGATGAAGAAGATACATCCACTATTTGGTTGAGTCTAGCACATTCTAGTGAGGGAGAGAAGCTACCTCATTCCACAACA GTTTCTCTGTGTAAATATAATATTATGGACTATATGGACTAATCTCTCATCATAGTAAGCTCATACACATAACCAATAAT ATTGATTACTTAAGTTGGTCTGAACAAAATCAACTATATGTTTTAATTTGACATCTTGTTAATCTGGATTTTATAAATGT TATATGAATTATACTAGCTCATATAACAAATTTAACAATTCAGACCTCTGTCACTGTTTCTTGACTTCCATTCATGAGCA CGGTATCCCTGAAACCTTGAGGACCTTTGACGTTTTTATCTGAAGTTTTGCACCAGAGAGATGAAGATTTGTGAGGCATA TAGCATAATTTAAAATTATCTTCCTGTGACTGAATACAGTTACTGACTTACTGTATTAGTTTAAAGTTGTCTTTTATCTC TTCTAAAGTGGTTCCCACTGTAACTGAGGATGCTCATTAAGTTGCTGAAATGTTAATAATTTATTTAAAAAAAAAGAGGT GATTATGGTAGTGGTTGCAGTCTAGTGCTGTACATGATTCCCGTTTTTACATTGTGAACACAGGGTAACTTTGACCTTGT GGGAAACAACTTCCCTGTCTTCTTCGTACGTGATGGCATGAAATTTCCAGATATGGTCCATGCTCTGAAGCCCAATCCCA AGTCTCACATCCAGGAGAATTGGAGAATCCTTGACTTCTTCTCCCACTTTCCAGAAAGCCTTCATATGTTCACCTTTCTA TTTGATGATGTGGGTGTTCCACAAGATTATAGGCACATGGATGGTTTTGGAGTTAATACATATACCCTGATCAACAAGGC TGGGAAAGTAGTGTACGTGAAATTTCACTGGAAGCCCACATGTGGTGTTAAGTGTCTATTGGAGGAAGAGGCCATTAAGG TGGGAGGATCCAACCACAGCCATGCCACTCAAGACCTTTATGAGTCAATTGCTGCTGGTAACTATCCTGAGTGGAAACTG TTCATTCAAACCATAGATCCTGATCATGAAGACAGATTTGATTTTGACCCACTTGATGTAACTAAGACTTGGCCTGAGGA CATTATACCCCTGCAGCCCGTTGGTCGCATGGTCTTGAATAAGAACATAGATAATTTCTTTGCTGAGAATGAACAACTTG CATTTTGCCCTGCCATTGTGGTACCTGGTATATCTTACTCAGATGATAAGATGCTTCAAACCAGGATTTTCTCTTATGCT GATTCACAGAGGCACAGACTTGGACCAAATTATCTGCAACTTCCTGCCAATGCTCCCAAGTGTGCTCACCACAACAATCA CCATGAGGGTTTCATGAATTTCATGCACAGGGATGAAGAGGTAAATCAAAGTTTTCATTCTTTTATTTTCATGTTGATGT TTTGTATAATAAGCTGGTTGTCATGATAACTACCTAGTGCTGTTGAATTATTTATACACATGCTGACTTGGTCTTAATCC TGAGTATGGAATTGCATGCTATACTCTAGTTGGAACTTTCTATTTAGCAATGTACTTTAGTTGGAACTTGGAAATATTTT TTTCCTTTTGACTGAGTGCTGCCTATTTATAGGTCAATTACTTCCCTTCGAGGTATGATCCTGTTCGACATGCAGAAAGG TACCCCATTCCTCCTGCAATCTGCACTGGAAGCCGCGAACGGGTTAGTTCTGTTGAATAGCTTAATATGAAAATGCTTAA TATAGTGTGACTAAATCTTCCAGCCCTCAGCTTCAATTTAGATTGCATTACTTCATTTCAATGGTTATTTGTCTCAGAAA CCTCTGCATTTTAGAATTCTAAACAAATTTTCTTGAAGATTCAATGAGAGCATTAGATAAAACATATATTTATTGATGAT GGGTAATTGGTGTTTTAAAACTTCTGCCATCATAGTAAACTCCAACCATTTTTGCAGAGGCTCCCCTTCTTAAAAGCATA TCTTTCTTTGACATTCTTTTCTAATCTATTTAGTAAGATAAAAAAATTAAGCAAGTACAGTTGAAAGACGTTGTCCCGCA ATTAGTAAAACATTCTTTTCTAATCTATTTAATGAGAGTATTAGATAAAACATACATTTATTGACATGATCTATACGGGA GCAAAGACATTGTCCCGCTACATCAGTTAAATATTTCCTAGTTGTTAATGAAGTTAGGCAGCATTTAGTACAAAGTTTAA GTAGTTATAATTTTTAACATCAATTTTGGATAGAAGAGATAGATTCATCATTAAATCGGTTATAAAACAAATGTATAAGA TTTTAAAAAACAGTAAATAGCAGAAAAATATATGAAATGCTGCCTGTATTAGGGAAGTAATGTGTCAATGTCTCTTCTCT AAATGCAGTGTGCAATTGAGAAGGAGAACAACTTCAAGCAGCCTGGAGAGAGATACCGATCTTTTGCGCCTGACAGGTTC CTTTATGAACTACTGATATGATCAATATGAATATGTATGGGATGTCTAACGTTGGTTCTCTCTTCTGTTTCTTGACTTAT TTGCAGGCAAGATAGATTTGTCCGCCGATGGGTTGATGCTTTATCTGACCCACGTGTCACCCATGAAATCCGCTCCACCT GGATATCATACTGGTCTCAGGTAAGATTTGGACATGCTATTTTATCACTACAAGAACTATAGTATCTAGTGTAAATGAAT CTGCTCTTGTGTGCTAATATGTTCTTTGTTGGCGTTGCTACGCAGGCTGATCGTTCTCTTGGGCAAAAGATAGCATCTCA TTTGAACTTGAGGCCAAGCATTTAA
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0436200.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGATGATGCAGCACCGGCCATCTAGCGCCTTCAACTCTCCCTTCTGGACAACCAATTCCGGTGCTCCTGTATGGAACAA CAACAACTCTATGACTGTTGGAGTTAGAGGTCCTATTCTCCTTGAGGATTATCATCTTGTGGAAAAGCTTGCAAACTTTG ATAGGGAAAGGATCCCAGAACGTGTTGTCCATGCTAGGGGAGCTAGTGCAAAGGGTTTCTTTGAAGTCACACATGATGTT TCTCACCTGACATGTGCAGATTTCCTTCGAGCCCCTGGAGTTCAGACACCTATCATTCTCCGTTTCTCGACTGTCATTCA TGAGCGTGGTAGCCCTGAAACCTTGAGGGATCCTCGTGGTTTTGCTGTGAAGTTTTACACCAGAGAGGGTAACTTTGACC TTGTGGGAAACAACTTCCCTGTCTTCTTCGTACGTGATGGCATGAAATTTCCAGATATGGTCCATGCTCTGAAGCCCAAT CCCAAGTCTCACATCCAGGAGAATTGGAGAATCCTTGACTTCTTCTCCCACTTTCCAGAAAGCCTTCATATGTTCACCTT TCTATTTGATGATGTGGGTGTTCCACAAGATTATAGGCACATGGATGGTTTTGGAGTTAATACATATACCCTGATCAACA AGGCTGGGAAAGTAGTGTACGTGAAATTTCACTGGAAGCCCACATGTGGTGTTAAGTGTCTATTGGAGGAAGAGGCCATT AAGGTGGGAGGATCCAACCACAGCCATGCCACTCAAGACCTTTATGAGTCAATTGCTGCTGGTAACTATCCTGAGTGGAA ACTGTTCATTCAAACCATAGATCCTGATCATGAAGACAGATTTGATTTTGACCCACTTGATGTAACTAAGACTTGGCCTG AGGACATTATACCCCTGCAGCCCGTTGGTCGCATGGTCTTGAATAAGAACATAGATAATTTCTTTGCTGAGAATGAACAA CTTGCATTTTGCCCTGCCATTGTGGTACCTGGTATATCTTACTCAGATGATAAGATGCTTCAAACCAGGATTTTCTCTTA TGCTGATTCACAGAGGCACAGACTTGGACCAAATTATCTGCAACTTCCTGCCAATGCTCCCAAGTGTGCTCACCACAACA ATCACCATGAGGGTTTCATGAATTTCATGCACAGGGATGAAGAGGTCAATTACTTCCCTTCGAGGTATGATCCTGTTCGA CATGCAGAAAGGTACCCCATTCCTCCTGCAATCTGCACTGGAAGCCGCGAACGGTGTGCAATTGAGAAGGAGAACAACTT CAAGCAGCCTGGAGAGAGATACCGATCTTTTGCGCCTGACAGGCAAGATAGATTTGTCCGCCGATGGGTTGATGCTTTAT CTGACCCACGTGTCACCCATGAAATCCGCTCCACCTGGATATCATACTGGTCTCAGGCTGATCGTTCTCTTGGGCAAAAG ATAGCATCTCATTTGAACTTGAGGCCAAGCATTTAA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0436200.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MMMQHRPSSAFNSPFWTTNSGAPVWNNNNSMTVGVRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDV SHLTCADFLRAPGVQTPIILRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPN PKSHIQENWRILDFFSHFPESLHMFTFLFDDVGVPQDYRHMDGFGVNTYTLINKAGKVVYVKFHWKPTCGVKCLLEEEAI KVGGSNHSHATQDLYESIAAGNYPEWKLFIQTIDPDHEDRFDFDPLDVTKTWPEDIIPLQPVGRMVLNKNIDNFFAENEQ LAFCPAIVVPGISYSDDKMLQTRIFSYADSQRHRLGPNYLQLPANAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRYDPVR HAERYPIPPAICTGSRERCAIEKENNFKQPGERYRSFAPDRQDRFVRRWVDALSDPRVTHEIRSTWISYWSQADRSLGQK IASHLNLRPSI
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11465:SF41
4 491 488 0.0 –
PIRSF
PIRSF038928
4 490 487 5.7E-180
IPR024711
PANTHER
PTHR11465
4 491 488 0.0
IPR018028
Gene3D
G3DSA:2.40.180.10
11 490 480 2.7E-209
IPR037060
SUPERFAMILY
SSF56634
12 488 477 6.41E-208
IPR020835
ProSiteProfiles
PS51402
13 491 479 75.106
IPR018028
CDD
cd08154
15 483 469 0.0 –
SMART
SM01060
17 400 384 3.9E-247
IPR011614
Pfam
PF00199
17 397 381 1.4E-174
IPR011614
PRINTS
PR00067
30 53 24 1.3E-80
IPR018028
ProSitePatterns
PS00438
53 69 17 -
IPR024708
PRINTS
PR00067
93 111 19 1.3E-80
IPR018028
PRINTS
PR00067
114 131 18 1.3E-80
IPR018028
PRINTS
PR00067
133 151 19 1.3E-80
IPR018028
PRINTS
PR00067
298 325 28 1.3E-80
IPR018028
PRINTS
PR00067
330 356 27 1.3E-80
IPR018028
ProSitePatterns
PS00437
343 351 9 -
IPR002226
Pfam
PF06628
422 485 64 3.4E-17
IPR010582

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004096
Molecular function Catalase activity Catalysis of the reaction: 2 hydrogen peroxide = O2 + 2 H2O.
Subterm of
GO:0006979
Biological process Response to oxidative stress Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
Subterm of
GO:0020037
Molecular function Heme binding Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0436200.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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