Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0438700 |
| Transcript ID | LotjaGi1g1v0438700.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glycerol-3-phosphate acyltransferase; TAIR: AT2G38110.1 glycerol-3-phosphate acyltransferase 6; Swiss-Prot: sp|O80437|GPAT6_ARATH Glycerol-3-phosphate 2-O-acyltransferase 6; TrEMBL-Plants: tr|A0A1J7GE29|A0A1J7GE29_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0438700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:93368841..93372494) extracted from Lotus japonicus Gifu genome v1.2.
GGGTGTGTAGAAAGCTTGTTGCTATTTATAGTACATGTTCAATAAAAGTTCAAAGACATCACTATGTGTTCTCTCTCCTT CCCCTTTTAAAATCCCCCTCTTCCCCCTTGCTCCTCGTAACATTTTCTCCTGAGCTTCTGTTTTAAGAGCCATGGTCATG GGAGCCTTTGGCCATTTCAAACCAATCTCAAAATGCAGCACAGAAGAAAGATCAAACCAAACCGTGGCCTCAGACTTTGA TGGCACCCTTCTCGTGTCTCCAAGCGCCTTCCCTTACTACATGCTTGTTGCTATTGAAGCTGGTAGCTATCTAAGAGGAC TCCTCCTCTTAGCATCTGTCCCTTTTGTGTACTTCACCTGCCTTTTCATCTCTGAAACCGCGGCCGTCAAAACCTTGATC TTCATCACATTCGCCGGTTTGAAGATCAAGGATGTTGAGATGGTGACAGCATCGGTGCTGCCAAAGTTCTACGCGGAGGA CGTGCATCCGGAGACATGGAGAGTGTTCAACTCTTTCGGCAAGCGTTGCATTGTCACCACTAGCCCGAGGTTGATGGTGG AGCCTTTTGCTAAGTCCTTCTTGGGGGCTGATAAGGTGCTTGGGACAGAACTTGATGCAACAAAATCAGGGAGAGCAACT GGGTTTGCTAAGGAACCTGGATTGCTAGTTGGGGAGCACAAGAAAGAAGCTCTTGTCAAAGAATTTCAGTCTAACTTACC TGATTTGGGACTAGGGGACAGTGAAACTGATCATGACTTCATGTCAATTTGCAAGGTCAGTATGATTTATCTTTCTTTCA CAAGAATGTTATTATATATGATCTCATTTTGTTTGTAGCTTTAAATATTGAACATTTTTAGCTGTGATAGCAATTTGTGT TTTCATTCTTAACAACTTACTCGGTTGGTATAGCGGTTCATAGACACTTCATCCATTAAGCAATTGATTGAGGAATTAAA TCTCAACTCTAGTGAATAAAAAGAACCGTGCTGAAAGCTACTGAGCCGAATCACTACTCTCACCACCATCGAATGTGGAG ATACATTCGTTTAAGAAAACAACTTATTGTGTTTTGATAACTCTTTGTTACCATCTACTAATACAATTAATATGTCGCAA ATCCATAATAATAAGGTTGTACCTTGAGTAAAGGAAATATACATGAATATGATTACTCTATGATTAGATTAACTCAATGT TTCCATTTACCTTTGTTTCACTTTCTATTTCCGGATGAGGTTGCCAACTTTGAACATTTTGTGGACTGTTTCTTAGCTCA ATGAAGCTATAGTAGTTTTTTTTTTAATAAAAGTAATAAAGTTGAATATTTTTAGCATTGAATTCATGTTTGGTGCGAGT GTTAATGACCATGCCATGATATGTTGTTATCACCTGTGTTTGTGTGTCCCTATTCACTCGCGGCACAAGTAAACCCCTCT TCTTGTTTGTTTTGTTCCTTCTTTTTATTTTCATTTTACTTACTACCATCAACGCGCAAATGGTCCCTCACGTTCCATAC TCCATTAATGGATAGACATTGAGCTGTCATTGACTCATTGCTCTGCATTTGAGTTCTTTCTTCTCTCTCATGCATAATAA CCATTAACTACTTTTAGATACTAGTTATTATAAATCGTGCACACACCGAATTCAGTTTTTAGAATTGAAGGCTGTAAATT TCGATCAACTTCTCATGTTTAACCCACTTTGGACATAAAATCCAAGGCATTTGTTTTTTCTCATGTAAAAGATATGCAAT GTGAAAATATATATATCTGTAGACATATAAACAAACAGTGGCGACACACAGACATATACTTGTGGTGGTCTTGTAGTAAC AGTATATATGTCTAGGGTGTCGCAACTGTTTATTTGTCTTTCAATCATCATATCCGTATGTAATGGTGTAAAACATATGC CTCTCGGAAGATTGAAATCTTGTAACCTAAATTGTGTATCGTCTCATTCTCTATTTGAAAAATAAAATATTGACATGTAT CTATTAAAAATTAACGTGTATGTTTATAATTGTGCCACTCGTGTGTTTTCTAATTAACACGACAAAATTTTATTAATTAG ATAAAAAAAAATTGAGACACTGATCTTGAAATTAGATATTGTACCGAGTTGAATTAGAACTCAGCTACTTTTAAACACTA ATTACTATAAATCATGTGGACACTGAATTCAATCTCCAAATTAAAGGCTACAGTTGAACTCATGCCCTAACTTTTCTTAC ACTAACAATCTTGTCATGTTAATTAAAGAAATACATGATGAGTGGGCTCGTTAAATTTGATTGGTTGAATGGAGAATGAG ATACATTTGACACAATGAAGATTTCAACATGAACTTCTCATGTTTAAACCACTTTGAACATAAAATCCTAGCCATATTAT TTTGTTGTTTTTAAGCATATACATGTAAAAGATATGCAAAGGTGTAAAACATGTGTCTCTGCATAGCTTATCATCATTTA ATTAAAAAGCACAATCCTTTTGAGAAGCCATTAACTGAATTTTACCATGCAGGAAGCATATATTGTACCAAGGATTAAAT GTGAGGCACTACCAAGAAACAAGCTTCTAAGCCAAGTTATTTTTCATGAGGGTAGGTTTGCTCAAAGGCCAACTCCTCTA GCTGCACTTTTGACCTTCCTATGGCTGCCAATTAGTATCATGCTCTCTATTTTAAGGGTCTACCTTAACATCCCTTTGCC AGAAAAGATTGCATGGTACAACTACAAGCTCTTGGGAATCAGAGTCACTGTGAAGGGTACCCCTCCACCACCCCCAAAGA AAGGTCAAAAGGGGGTTCTTTTTGTTTGTAACCATAGGACAGTTTTAGACCCAGTTGTTACAGCAGTTGCACTAGGAAGA AAAATTAGCTGTGTCACATATAGTATCAGCAAATTCAGTGAAATAATTTCACCAATCAAAGCTGTGGCATTGTCAAGGGA CAGAGAGAAAGATGCAGCCAACATTAGGAGGTTGCTTGAAGAAGGGGACTTGGTGATTTGCCCTGAAGGCACAACTTGCA GAGAGCCATTCCTCTTGAGGTTCAGCGCGCTTTTCGCTGAGCTAACCGATAGGATTGTCCCGGTCGCGATTAACACGAAA CAAAGCGTGTTTTACGGAACAACGGCTCGCGGCCATAAATTGCTGGACCCTTATTTTGTGTTTATGAATCCCATGCCAAC ATATGAGATCACTTTCTTGAACCAGCTTCCGAAAGAGCTCACTTGCACTGGAGGGAAATCGGCCATTGAAGTTGCGAATT ACATTCAAAAGGTTATTGCAGGAGCTCTGGGATTTGAGTGCACCAACTTAACAAGGAAGGACAAGTATGCCATGCTTGCA GGAACTGATGGGAGTGTTCCATCTAAGAAGGAAAAAGCTTGAAGCAGAGAGGCTAAGTAGTTTCACCTTTTAATTGATTA AGTGGAATGTGTTTCCAAAATGCTTGGAAATTGGAATTACTTATGATAGGAATAAAAAACTGATTGTGTGTTGAAGATCA AACATAAAAAGTTCATGATATATACTTTGTTATTCAGATATATACAAATTGTAGCTTCTGGCTGTGTTAATTTTTTTACA ATATAATTTGTCACATTAGAGAAATCACCAGCTCCTAAAAGCTCTAGCATTTTC
CDS sequence (LotjaGi1g1v0438700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTCATGGGAGCCTTTGGCCATTTCAAACCAATCTCAAAATGCAGCACAGAAGAAAGATCAAACCAAACCGTGGCCTC AGACTTTGATGGCACCCTTCTCGTGTCTCCAAGCGCCTTCCCTTACTACATGCTTGTTGCTATTGAAGCTGGTAGCTATC TAAGAGGACTCCTCCTCTTAGCATCTGTCCCTTTTGTGTACTTCACCTGCCTTTTCATCTCTGAAACCGCGGCCGTCAAA ACCTTGATCTTCATCACATTCGCCGGTTTGAAGATCAAGGATGTTGAGATGGTGACAGCATCGGTGCTGCCAAAGTTCTA CGCGGAGGACGTGCATCCGGAGACATGGAGAGTGTTCAACTCTTTCGGCAAGCGTTGCATTGTCACCACTAGCCCGAGGT TGATGGTGGAGCCTTTTGCTAAGTCCTTCTTGGGGGCTGATAAGGTGCTTGGGACAGAACTTGATGCAACAAAATCAGGG AGAGCAACTGGGTTTGCTAAGGAACCTGGATTGCTAGTTGGGGAGCACAAGAAAGAAGCTCTTGTCAAAGAATTTCAGTC TAACTTACCTGATTTGGGACTAGGGGACAGTGAAACTGATCATGACTTCATGTCAATTTGCAAGGAAGCATATATTGTAC CAAGGATTAAATGTGAGGCACTACCAAGAAACAAGCTTCTAAGCCAAGTTATTTTTCATGAGGGTAGGTTTGCTCAAAGG CCAACTCCTCTAGCTGCACTTTTGACCTTCCTATGGCTGCCAATTAGTATCATGCTCTCTATTTTAAGGGTCTACCTTAA CATCCCTTTGCCAGAAAAGATTGCATGGTACAACTACAAGCTCTTGGGAATCAGAGTCACTGTGAAGGGTACCCCTCCAC CACCCCCAAAGAAAGGTCAAAAGGGGGTTCTTTTTGTTTGTAACCATAGGACAGTTTTAGACCCAGTTGTTACAGCAGTT GCACTAGGAAGAAAAATTAGCTGTGTCACATATAGTATCAGCAAATTCAGTGAAATAATTTCACCAATCAAAGCTGTGGC ATTGTCAAGGGACAGAGAGAAAGATGCAGCCAACATTAGGAGGTTGCTTGAAGAAGGGGACTTGGTGATTTGCCCTGAAG GCACAACTTGCAGAGAGCCATTCCTCTTGAGGTTCAGCGCGCTTTTCGCTGAGCTAACCGATAGGATTGTCCCGGTCGCG ATTAACACGAAACAAAGCGTGTTTTACGGAACAACGGCTCGCGGCCATAAATTGCTGGACCCTTATTTTGTGTTTATGAA TCCCATGCCAACATATGAGATCACTTTCTTGAACCAGCTTCCGAAAGAGCTCACTTGCACTGGAGGGAAATCGGCCATTG AAGTTGCGAATTACATTCAAAAGGTTATTGCAGGAGCTCTGGGATTTGAGTGCACCAACTTAACAAGGAAGGACAAGTAT GCCATGCTTGCAGGAACTGATGGGAGTGTTCCATCTAAGAAGGAAAAAGCTTGA
Protein sequence (LotjaGi1g1v0438700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVMGAFGHFKPISKCSTEERSNQTVASDFDGTLLVSPSAFPYYMLVAIEAGSYLRGLLLLASVPFVYFTCLFISETAAVK TLIFITFAGLKIKDVEMVTASVLPKFYAEDVHPETWRVFNSFGKRCIVTTSPRLMVEPFAKSFLGADKVLGTELDATKSG RATGFAKEPGLLVGEHKKEALVKEFQSNLPDLGLGDSETDHDFMSICKEAYIVPRIKCEALPRNKLLSQVIFHEGRFAQR PTPLAALLTFLWLPISIMLSILRVYLNIPLPEKIAWYNYKLLGIRVTVKGTPPPPPKKGQKGVLFVCNHRTVLDPVVTAV ALGRKISCVTYSISKFSEIISPIKAVALSRDREKDAANIRRLLEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVA INTKQSVFYGTTARGHKLLDPYFVFMNPMPTYEITFLNQLPKELTCTGGKSAIEVANYIQKVIAGALGFECTNLTRKDKY AMLAGTDGSVPSKKEKA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 52 | 52 | - | – | |
| PANTHER | 8 | 494 | 487 | 4.9E-288 | – | |
| PANTHER | 8 | 494 | 487 | 4.9E-288 | – | |
| SUPERFAMILY | 11 | 201 | 191 | 8.68E-6 | ||
| Pfam | 26 | 204 | 179 | 1.1E-16 | – | |
| TMHMM | 52 | 74 | 23 | - | – | |
| Phobius | 53 | 73 | 21 | - | – | |
| Phobius | 74 | 243 | 170 | - | – | |
| Gene3D | 105 | 224 | 120 | 5.0E-10 | ||
| SUPERFAMILY | 220 | 488 | 269 | 9.15E-31 | – | |
| Phobius | 244 | 266 | 23 | - | – | |
| TMHMM | 244 | 266 | 23 | - | – | |
| Phobius | 267 | 497 | 231 | - | – | |
| Pfam | 296 | 392 | 97 | 4.7E-8 | ||
| SMART | 303 | 404 | 102 | 6.0E-15 | ||
| CDD | 303 | 464 | 162 | 8.20822E-19 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transferase activity, transferring acyl groups | Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor). |
Expression pattern of LotjaGi1g1v0438700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…