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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0442600 |
| Transcript ID | LotjaGi1g1v0442600.2 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Acyl-CoA dehydrogenase; TAIR: AT3G51840.1 acyl-CoA oxidase 4; Swiss-Prot: sp|Q96329|ACOX4_ARATH Acyl-coenzyme A oxidase 4, peroxisomal; TrEMBL-Plants: tr|A0A072U1Y7|A0A072U1Y7_MEDTR Acyl-CoA dehydrogenase; Found in the gene: LotjaGi1g1v0442600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:93986115..93994169) extracted from Lotus japonicus Gifu genome v1.2.
CCCCACTCGATTCAATTTCAGTGTTGACCATTTCCCTTTCTCTTCCACCACCACCACCATGACTGGTCCCAATCCAGGTC GAGTTCTTCCTTCCATTTCTATTTTTGGATCCATTGTTTTTGTTATAGAAATATGATTCAATTTGAATTTGCAGAAAATT GTTATTCACGATTCCTTTGATTTTTCATGTGTTATCAGCAGATATGAATTCAAAGATGCCTTCATATTTTAATTTACCAG CACTTGATGTTTCTGTGGCATTTCCACAAGCAACTCCTGCTTCTACTTTTCCTCCTTGTGGTAACATTTCTATTTGTATA TAATTTTCAATGAATATTATCAATCATGCTAGTGGATCTCAATAAAGAGTGTGTTAGAAACTGTGTTATTGAAATTGCTC TTGCATTATTTGTGGATGCAAAGTGTTTTGTGTAATATAAAAAATGATGCATGCTTGGGTTTGGACTTTGGAGGATTGAC TTCTGTTTTGTATCTGTGATTATATATTGTTGGAAAGTGCAGCTTCAGATTATTTTCAATTCGATGATTTATTGACACCG GAGGAGCAAGCAGTTAGGATGAAAGTGAGAAAGTGTATGGAAAAGGAAATTGCTCCCATAATGACCCAGGCATGTTCTGT CTATATAAATTGTTGAAGTAAATGTCTAGATTGGCACTGCAACCGTGCATATATCAGAAATCATATAATTTGGTCTAAAA GCAACACAATAAATAACATCTTTTGGGGACAAAGTTGTAAATTTACTCATACATATACATGTTAACAATGGAAAGTATAA TTTGATGTAATACAAAAAAAGAAATTAAAGGGCATTTGGAGGATCAAACTAATGATAATAGTATTTTCAGATGACCATAT TTGATAGGTTTTTTTTTCTGGGGTGGGGAGTGAAACGGATTAGTGTATTAGCATGTTTATTTTCACAATTGACACAAAAA CCTAAGACATATTTACTAAGAAGCTAAGATTCGTAGCTTCTAACCAGAATTGATTCTAGAACATTTCACCGTGGAGCCAA ACGTGCTATATATAATATGAAAAGATTCTATGACGATGCTATCTTTTATAAAAAAATATTCTCCTGACTCTAAATCTCAT GTTTTAAGCAGTACTGGGAGAAGGCCAATTTCCCATTTCATGTCATTCCGAAGTTTGCTGAACTGCATATTGCTGGTGGC ACAATCAAGGTGAGCTATTAACATAATTTCCCATTTATTTTGTCTTAGTTAGTTGTAAGACAGTGCAAAAGGAGTTCTTA GCTTCCTCTGACTGATTCTCAGGGTTATGGTTGTCCTGGTCTTTCCATGCTTGGGAGTGCTGTTGCTGCAGCAGAAATTG CTAGAGTTGATGCAAGCTTTTCAGTTTTCATTTTGGTCCATTCATGCTTGGCAATGCTCACCATTGGTAATATCCTTGTT TGTAATAATCTCTGAATGCAACTGTTTTTCTAATAGGTTAATAGCTATTCATAGTTTCTGATATTTTACATCTTTGATTG ACTGCCAAGTATAGCATTGTGTGGATCTGAAGCTCAGAAGCAAAAGTACCTACCTTCTTTGGCAGAGCTAAAAACTATAT CATGTTGGGTAAGTGAGTCACCTTCCTTGGATTTGAAAGATATGCATCATGTTGCTGAAGTTCCACTTCTCAAAGAGGTT ATTTTCTTTTGGTTAGGCTTTGACTGAACCTGATTATGGAAGTGATGCCAGTTCTTTGAAGACCACAGCAACCAAGGTTC ATTGTCTAATGTGTCTTACCTACTATTTACTTCTCTAGCAAGTTGCATTTTGCTTTTTTATGAATTATTTATCATTTTAC TCATGTAACTTTCACTATGCTCAACGGTACCAATGTTCCGTAATGCATTCTTGCTTTGCATTGAAACTAATCAGGTGGAA GGTGGTTGGATCCTTGAGGGCCAAAAGAGGTGGATAGGAAACAGTACATTTGCTGATTTGTTGGTTATCTTCGCCAGGAA TACCACAACAAATCAAATAAATGGGTATGCAATGTGTACCAACTTCGCTTATTGTTAAATCCTTATATATAAGCATGTCT GTATGTGGATTATTTGTATTGTAGCACATGTAAAGGCCATGGAGATACAAATCTCCATGATGTTTCATGGACCGCCTTAC CCCAAAAAGAAAATAGAAATGAATGCAATGATTAACATGGACGTGAATGTTCGATCTTTTTATATAGTAGTTTTTCACCC TGTGTATGTTCATTACTTCACCAGAATATAGCCTAGCCCTAGAATAACATTACAATGGAACATTTAGCGCTTGTTTAGTT TGATAACATTGTTTATGTTTTTACTGTTTAACTAATAATCACAAAGTTACCACTTTGTTTTGACCTTTTCTGTAATTATT AGTGAAAATGGAAAACATCTTTCTCAAACTGAACACACTCTTAGGATTCTAGATTGTTTCTTCATATATATTTTCTTCAC TTAACTTTTATATTCCTGGATGCTTTCATGTCCTGCTTCACAAGTACTGTATTTATTTACCTTTTTCTTATGCATATTAT TTCAGCTATATTGTAAAAAAAGATGCACCTGGTTTAACAGCCACAAAAATAGAGAATAAAATTGGACTTAGGATCGTACA AAATGGAGACATTGTTTTGAAGAAACTTTTTGTCCCTGATGAGGATAGAATAGCAGAACTCAATTCTTTTCAAGACACAA ACAAGGTAAATTTGTACGGTGCTTTCGTTCTCAGGAATTATTGTGTGATTTTATCATTTTCAACAAAAAATTACTGTAAA CATCTTGTTGTTCATATAACAGAAATTACTTGATGAAGTAGTAGAGCTTTTATCAATTCTGGTTCCTGTGTCCTCTTAGA GCCTTTGTAGGACTGATAGGACACAACTTCTGAATTGAACAGGAAATTTTACTGAATTCAAACAGGTAAGCTTCTGAAGA AAAGATCCAGTGCCAAGGCTCCTACAGAGAATATTTTTACAGGGAATATTTCCCTGCTCTAAGATTCACACTTCACACCC CCTTACTTCCCTATACTACAACATATAGATAGATAGATAGAAACATAACTTACTCTGATTATGTAGCTGTGTGTTAATTA TTCAAAGGGAGAGTTTTGTCACTGTAATGGTTCCACCCGACTCGATCAGAATTGCTTCCTCTGAAGGATAGCCTATAGTT GGAGGACCTGCCCCAGAGAAATTTTTTTCTTAATAGAATGGTATTTAATAAATAGTGTATTTACCTCCTCAATATTTTTA TAGTATCTAATTCAATAAGCTATTGTTTATTTTGCTAAATATGTGTTTAGTTTTCGCCCTGTTAACTAACTCTTCCCTCT CTCAGTAACTGTGCTACACAGCAGTTCCTTAACTCACCCCCCTACATGGCAGTTCCTTAGGTCACCTTGCGGTTCTTTCT GGGTTTGACCTTCCAAATAGTTGTTTGAATGGAGTTGGACTTGGATCTAGCAACTGATCCTCCTCCAACCCAACATACTC CTTGGCTCAATCAGATTCTGCATGTCTTAGGTTATGAATAAGATCAGCATTTGTCTGGTTCTACCACTATCCATTTATTG CTAGTGCACTTAAAGGCTATTAGCATTCCAACCAGTTGAATATGCCACACTCAAATACTGTCACATCTGCTTCTGAAAAA CGAGAACATTCTAATTTTCTTTTCCCATGTCTTTGTATTAGTTCATTATTCTCTATCCAATTCTTGGTTACTTCATCATT ATAACTTTGTATTTATAATTTACATGTTGTATACTTATTTTTTGCTATCTTAAAACAGGTACTTGCTGCTTCTCGTGTAA TGGTTTGCTGGCAGCCAATTGGTGTATCAATGGGCATCTATGATATGTGTCATAGGTATTCTTATATAGCATGCTAATAG TATGCTTCAACCAAAGCTTTCACTGAAAACCATGCTGAAAATTCTATGTCATTAAAAGGTACCTTAAGGAAAGGAAACAG TTTGGAGCACCATTAGCAGCTTTCCAAATCAACCAACAGAAACTTGTTCAAATGCTTGGTAACGTTCAAGCAATGGTTCT TGTTGGTTGGCGCCTGTGTAAGTTGTATGAGAGTGGTAAACTGACGCCGGGTCATGCTAGCTTGGGGAAGGTAACTCATA ACCTATCCACATTTATAATCATACTATACTCACAAAATAAAAGAAAAGAAAACCCCAGAAAGTTTCTGACCAGTTTACCT TCATTGATTTAATGATCGGTTCGGTTTTTAAAATACTGGTATGTGGTACTGGTAGATAACTTACAATAATTTGTCATCAT TTTTCAGTCGTGGATCTCCTTGAGGGCAAGAGAAACAGCTGCCCTGGGGCGAGAGTTGCTTGGTGGCAATGGAATTTTGG CTGATTATCTTGTGGCAAAGGTTCTCATGCCTAATTCCTAATTTAGTAATTTAACTTCAGCAGATATTGATACTACATTT CCAAAGTTCTTACCAAAACCCAATGGGTGTCGGTCCTTGTGATTAAAACTTAGAGTTGGTTGATAGAAACCATAAGTCGA AAGTTAGATTCTTACTTCTTAGGAGTCGTATTCTTGAGGGTCTTCACTACATTATCACTACATTAAGGTTGGAATTACAA GAACAATTTAGGACATCAAAAGAAGTCCTGACCTAGAAGAAAGGCCCAACTGTGAAATTTTATTAAACCAAATGGATGCT GCTAGTGATCTCTTCATTCTAACTATGTACAAACCCTGCATGGGTTCTATTCCAATAGATTTGGATTTTTTTTTAAAACG AGATGGAAATGGGGGCCCAAGTGTATATCTTATGATACTTCTTTGATTATTATTTAGTATAGTAGTGATGTGGTGATTTC AATCATATCTATAGAAATTGCTCAATTTCCTAAGAGTCTATGACCTAACTCATGCAAAGTGCCTATCTTAACCACAGCAT AACCTCCGGCTTACTTCTTGTGACTTCACTGTTTTTGTTGATGAAGGCTCTGTTGGGCTATGATTAAACCAAAACTCAAT TGAAGTTTAAGCTCACAGAACATGATTATTACCAGACATCAGATTAAAACTTCTATACTTTTCCAGAGATTGGCCTCATT AGTCTACTTTGTTTTTATTGACATTGTTCATAGATTGGGACATTTTGTTTACTGACAGTGACATGTTTTTAACTTTTATG CTTTTATTCTCTATTGTTGCAGGCATTTTGTGACTTAGAACCGATCTATACCTTTGAAGGAACCTATGACATCAACACCT TGGTCACAGGTAGGGAAGTTACTGGTTTTGCAAGCTTTAAGCCGGCTGCTCAAAGAAGTAGAATGTGAAAGTGTAGAAGT GCTCCTCTATGGACTCCATTGGTTTATCTTTTTTTAGTTCAGCAACAATTCAGAAGCATTCAATTCAATAATTATACAAA TGTTAATGTAGATAACACAGCAGTGAAATGAAAAATAATGGATATTCTTCAAGTCCACATCTGCTCTTTTTCTTTTGTTG GTTGATGGCTTGGGCTTTTGGCATTCTCCTTCTCTTGCAGTGTGAATGAACCGTGTAATGAGGAAAGGACAAAAAAGAGC CTGTTTTTCAGCCAGAGTCAATTATATAAAGATGCTTCTGTGAGCAGTTCAAAATTAATTATGAGGAAAGAGTAGCTAAT GCAAACATACTATAAAAGTGACTTTTAAGGTTCCACACCTTGTACAACCAACTCAAAAACATTTCTTGATATATCACAAG AGAAACAAATATCTATTATAGTAAATATAGAAAATAGGTCATGAAATCTGGGGCAGCTGCTTGAGTGGAGTTCCTGGAAT GCTTTCTCAAATAGGTACTGAACCTATTGATGTTGAAGTGAGGCTATGGCTTCTAGATAAAGCATGCACTGCATGGCCTG ATCTTGCCCATCAAAGCTCTATGCTCATCGAAGAAACTTCAGAAAGGGAGAGAAACAACATCAGGAGGAAAACACCACCA GCTTATCATCAAATCCTGAGTGCACACTGCACAATGCTCATCATCATTGATGCTAGCTGCTAAGGTCCATGTATCTCACA ACTCAAACCAAATTGAAAAAAAAAATCAACAGATATGATACCTAGACTCAAAACAGAGACATAAAACAGTAAAGACACCA TACATAAACATCAATTTTTTCTTATCTCTCACCTCTTTTCCAATTTACATCTCATATCACATTCATTACTTCTCTCTTCT CTTCCCACAATCAACATTTTCCATAGAAAAAGGAAAATTATTAATAGACATCTGTAACATCCAACAAAGTGAGACAAGAT GAGAAAAGAGATGTAATAGATATGATATATGATAGAAGAAAGAGAAAGTGAGAAAAATGGAGTAAGTGTTGGATGTCTAC CCTATGTATGAGTATCATTACTCATTGAAAAAACATGAAGGAAAGGAAGGGAAAAAAAAAGGAAAGTAAAACCAAAACCA ACTTACAAGAAGAAAAGCCTTCTATTCATTCATCCTTGGCCTCCATCTTGGGCATCCTTATCCAACCCCCAAGACCTGAT CCTGATTTGAAGCTCAGCCACAGCAACCAAAAAGTTGATAATCTGAGCTGGTCTGAGAATCCTCACAACTTTCCAAGCTG TGTTTGACCTCAAAGCATCTGCTTTTTCCACAAGATTCTCCAGTACCTCCCTGAAACTGCTTGGAACCACAACACCCTCC TCTGCCATGAAGGACCTACTCAAACACACCCTGCCATGGCTTCTAGCCAAATCCACAAGCGGTGGCGCCGCCACACCCTC CTGAACTTTAGCCAGCTCATCGTTGAGGTCCCTCTCTTCCCTCTTGGTCTCTTGCCTCAGCTGACTCAACCTCTGCCTCT GCTCTCCTGACAAGTCAGCCACAGATGAGTTCACCACCTGAAACGTCATTCCAGGCTTGAACCCCGCCACCAAAAGGAAT GATCTCTCGAATGAACTGAACCATGGAGGTGAGAAAACAAGCAGAACATCTTGGTGGGCAATCCTTGATTTCTCTTCATA GTACTGTCCATAGTGGCAGAGGACCCTGTTGATCAGTTGCCTCATATCAGCATCCTGCAACTCTTGAAGGTGCTGCTGAG CTGAAAGAAGCTCGTCAAGAAAGGCTCTTTGCCGCACCATCCACCCTTGGAGAAATGCCTGAAATGCAGCAACGTTTGCA TGGTCAGTCATCTATGGATTCAGGGGTGTATGAGGGGAAGAGAGATAGGTAAAAGTAAAACCAAAAAAGAAGGAATGGAA ACTTGTTGGTTTGCTTAAGGGGGGAAGCATTGCAATTGCTCTGTGATGATGGTGCATGTAAGGGAAGCCTAATGGCTAAA AAGAGAGTAAGGTGAAGCAAAACAGAGTGAGCGGTGTTGAATTGGAGAAACAGAGATATACTCATAGATAGAAATAGTGG TGCTTGTGAGTGAGTGGCTTTCGGTGCAGTTTGTCGCCACGTGCAACGTTTTGAGGATAAAAATGTGATGAAATGAGAAT GGGGATAGAGGGGATGAACTGATTTGGATGGGTGAATGTGGGGTTGGTTGGTTGATATTGTTGGTTCATATGAAGAAGCT CAGTTATGATGGTGGATTATCATTCATTCATACGCACTTAATTTTCTCTTTTATCTCGTTTCGACTCACTTTATCGTCGT AACTCTCTCTTCTGTTTCTATCACATCAGTTAGTGTATTTAAAGTTTATGCGTAAGTGGTTTTAAAGTGTGAATGAAACT CTATTCTATTATGATGGTGGGGGAGTGTGTTGGGATTTGAGAATTGGGTTTGTTTTGGATTGAACTTTGAATCCATGCTT GGCCATGGGATTTATCAGGTGAAATGGTGACACATGCAAATCGAATGGTGCTGTCTTTGTATGAACCAGTGGGTTGATGC CAGGTTAGGCAGAGAAGTACAGAGACGGAGCCAAGTAAGAGAGAGAAGAGAAAACACACAAAGGAGGGGAAACTCTGCTG TGCTGTCTGCTTAGCTGTGAGCCACACCAAGAGTTTCGATCTGGCATCTTGTGAA
CDS sequence (LotjaGi1g1v0442600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACTGGTCCCAATCCAGATATGAATTCAAAGATGCCTTCATATTTTAATTTACCAGCACTTGATGTTTCTGTGGCATT TCCACAAGCAACTCCTGCTTCTACTTTTCCTCCTTGTGCTTCAGATTATTTTCAATTCGATGATTTATTGACACCGGAGG AGCAAGCAGTTAGGATGAAAGTGAGAAAGTGTATGGAAAAGGAAATTGCTCCCATAATGACCCAGTACTGGGAGAAGGCC AATTTCCCATTTCATGTCATTCCGAAGTTTGCTGAACTGCATATTGCTGGTGGCACAATCAAGGGTTATGGTTGTCCTGG TCTTTCCATGCTTGGGAGTGCTGTTGCTGCAGCAGAAATTGCTAGAGTTGATGCAAGCTTTTCAGTTTTCATTTTGGTCC ATTCATGCTTGGCAATGCTCACCATTGCATTGTGTGGATCTGAAGCTCAGAAGCAAAAGTACCTACCTTCTTTGGCAGAG CTAAAAACTATATCATGTTGGGCTTTGACTGAACCTGATTATGGAAGTGATGCCAGTTCTTTGAAGACCACAGCAACCAA GGTGGAAGGTGGTTGGATCCTTGAGGGCCAAAAGAGGTGGATAGGAAACAGTACATTTGCTGATTTGTTGGTTATCTTCG CCAGGAATACCACAACAAATCAAATAAATGGCTATATTGTAAAAAAAGATGCACCTGGTTTAACAGCCACAAAAATAGAG AATAAAATTGGACTTAGGATCGTACAAAATGGAGACATTGTTTTGAAGAAACTTTTTGTCCCTGATGAGGATAGAATAGC AGAACTCAATTCTTTTCAAGACACAAACAAGGTACTTGCTGCTTCTCGTGTAATGGTTTGCTGGCAGCCAATTGGTGTAT CAATGGGCATCTATGATATGTGTCATAGGTACCTTAAGGAAAGGAAACAGTTTGGAGCACCATTAGCAGCTTTCCAAATC AACCAACAGAAACTTGTTCAAATGCTTGGTAACGTTCAAGCAATGGTTCTTGTTGGTTGGCGCCTGTGTAAGTTGTATGA GAGTGGTAAACTGACGCCGGGTCATGCTAGCTTGGGGAAGTCGTGGATCTCCTTGAGGGCAAGAGAAACAGCTGCCCTGG GGCGAGAGTTGCTTGGTGGCAATGGAATTTTGGCTGATTATCTTGTGGCAAAGGCATTTTGTGACTTAGAACCGATCTAT ACCTTTGAAGGAACCTATGACATCAACACCTTGGTCACAGGTAGGGAAGTTACTGGTTTTGCAAGCTTTAAGCCGGCTGC TCAAAGAAGTAGAATGTGA
Protein sequence (LotjaGi1g1v0442600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTGPNPDMNSKMPSYFNLPALDVSVAFPQATPASTFPPCASDYFQFDDLLTPEEQAVRMKVRKCMEKEIAPIMTQYWEKA NFPFHVIPKFAELHIAGGTIKGYGCPGLSMLGSAVAAAEIARVDASFSVFILVHSCLAMLTIALCGSEAQKQKYLPSLAE LKTISCWALTEPDYGSDASSLKTTATKVEGGWILEGQKRWIGNSTFADLLVIFARNTTTNQINGYIVKKDAPGLTATKIE NKIGLRIVQNGDIVLKKLFVPDEDRIAELNSFQDTNKVLAASRVMVCWQPIGVSMGIYDMCHRYLKERKQFGAPLAAFQI NQQKLVQMLGNVQAMVLVGWRLCKLYESGKLTPGHASLGKSWISLRARETAALGRELLGGNGILADYLVAKAFCDLEPIY TFEGTYDINTLVTGREVTGFASFKPAAQRSRM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 13 | 430 | 418 | 4.3E-260 | – | |
| PANTHER | 13 | 430 | 418 | 4.3E-260 | – | |
| Gene3D | 31 | 164 | 134 | 8.2E-39 | ||
| SUPERFAMILY | 41 | 270 | 230 | 3.93E-62 | ||
| Pfam | 51 | 160 | 110 | 7.8E-25 | ||
| Gene3D | 165 | 271 | 107 | 8.4E-32 | – | |
| Pfam | 166 | 257 | 92 | 4.1E-22 | ||
| Gene3D | 272 | 432 | 161 | 1.4E-38 | – | |
| SUPERFAMILY | 275 | 420 | 146 | 6.28E-33 | ||
| Pfam | 276 | 416 | 141 | 7.5E-23 | ||
| ProSitePatterns | 376 | 395 | 20 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Acyl-CoA dehydrogenase activity | Catalysis of the reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor. | ||
| Molecular function | Oxidoreductase activity, acting on the CH-CH group of donors | Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor. | ||
| Molecular function | Flavin adenine dinucleotide binding | Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi1g1v0442600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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