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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0442700 |
| Transcript ID | LotjaGi1g1v0442700.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | transcription factor-like protein; TAIR: AT1G58330.1 transcription factor-like protein; Swiss-Prot: sp|Q84JC2|DOGL4_ARATH Protein DOG1-like 4; TrEMBL-Plants: tr|I1KKG2|I1KKG2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0442700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:93988646..93993607) extracted from Lotus japonicus Gifu genome v1.2.
CAAAACGTTGCACGTGGCGACAAACTGCACCGAAAGCCACTCACTCACAAGCACCACTATTTCTATCTATGAGTATATCT CTGTTTCTCCAATTCAACACCGCTCACTCTGTTTTGCTTCACCTTACTCTCTTTTTAGCCATTAGGCTTCCCTTACATGC ACCATCATCACAGAGCAATTGCAATGCTTCCCCCCTTAAGCAAACCAACAAGTTTCCATTCCTTCTTTTTTGGTTTTACT TTTACCTATCTCTCTTCCCCTCATACACCCCTGAATCCATAGATGACTGACCATGCAAACGTTGCTGCATTTCAGGCATT TCTCCAAGGGTGGATGGTGCGGCAAAGAGCCTTTCTTGACGAGCTTCTTTCAGCTCAGCAGCACCTTCAAGAGTTGCAGG ATGCTGATATGAGGCAACTGATCAACAGGGTCCTCTGCCACTATGGACAGTACTATGAAGAGAAATCAAGGATTGCCCAC CAAGATGTTCTGCTTGTTTTCTCACCTCCATGGTTCAGTTCATTCGAGAGATCATTCCTTTTGGTGGCGGGGTTCAAGCC TGGAATGACGTTTCAGGTGGTGAACTCATCTGTGGCTGACTTGTCAGGAGAGCAGAGGCAGAGGTTGAGTCAGCTGAGGC AAGAGACCAAGAGGGAAGAGAGGGACCTCAACGATGAGCTGGCTAAAGTTCAGGAGGGTGTGGCGGCGCCACCGCTTGTG GATTTGGCTAGAAGCCATGGCAGGGTGTGTTTGAGTAGGTCCTTCATGGCAGAGGAGGGTGTTGTGGTTCCAAGCAGTTT CAGGGAGGTACTGGAGAATCTTGTGGAAAAAGCAGATGCTTTGAGGTCAAACACAGCTTGGAAAGTTGTGAGGATTCTCA GACCAGCTCAGATTATCAACTTTTTGGTTGCTGTGGCTGAGCTTCAAATCAGGATCAGGTCTTGGGGGTTGGATAAGGAT GCCCAAGATGGAGGCCAAGGATGAATGAATAGAAGGCTTTTCTTCTTGTAAGTTGGTTTTGGTTTTACTTTCCTTTTTTT TTCCCTTCCTTTCCTTCATGTTTTTTCAATGAGTAATGATACTCATACATAGGGTAGACATCCAACACTTACTCCATTTT TCTCACTTTCTCTTTCTTCTATCATATATCATATCTATTACATCTCTTTTCTCATCTTGTCTCACTTTGTTGGATGTTAC AGATGTCTATTAATAATTTTCCTTTTTCTATGGAAAATGTTGATTGTGGGAAGAGAAGAGAGAAGTAATGAATGTGATAT GAGATGTAAATTGGAAAAGAGGTGAGAGATAAGAAAAAATTGATGTTTATGTATGGTGTCTTTACTGTTTTATGTCTCTG TTTTGAGTCTAGGTATCATATCTGTTGATTTTTTTTTTCAATTTGGTTTGAGTTGTGAGATACATGGACCTTAGCAGCTA GCATCAATGATGATGAGCATTGTGCAGTGTGCACTCAGGATTTGATGATAAGCTGGTGGTGTTTTCCTCCTGATGTTGTT TCTCTCCCTTTCTGAAGTTTCTTCGATGAGCATAGAGCTTTGATGGGCAAGATCAGGCCATGCAGTGCATGCTTTATCTA GAAGCCATAGCCTCACTTCAACATCAATAGGTTCAGTACCTATTTGAGAAAGCATTCCAGGAACTCCACTCAAGCAGCTG CCCCAGATTTCATGACCTATTTTCTATATTTACTATAATAGATATTTGTTTCTCTTGTGATATATCAAGAAATGTTTTTG AGTTGGTTGTACAAGGTGTGGAACCTTAAAAGTCACTTTTATAGTATGTTTGCATTAGCTACTCTTTCCTCATAATTAAT TTTGAACTGCTCACAGAAGCATCTTTATATAATTGACTCTGGCTGAAAAACAGGCTCTTTTTTGTCCTTTCCTCATTACA CGGTTCATTCACACTGCAAGAGAAGGAGAATGCCAAAAGCCCAAGCCATCAACCAACAAAAGAAAAAGAGCAGATGTGGA CTTGAAGAATATCCATTATTTTTCATTTCACTGCTGTGTTATCTACATTAACATTTGTATAATTATTGAATTGAATGCTT CTGAATTGTTGCTGAACTAAAAAAAGATAAACCAATGGAGTCCATAGAGGAGCACTTCTACACTTTCACATTCTACTTCT TTGAGCAGCCGGCTTAAAGCTTGCAAAACCAGTAACTTCCCTACCTGTGACCAAGGTGTTGATGTCATAGGTTCCTTCAA AGGTATAGATCGGTTCTAAGTCACAAAATGCCTGCAACAATAGAGAATAAAAGCATAAAAGTTAAAAACATGTCACTGTC AGTAAACAAAATGTCCCAATCTATGAACAATGTCAATAAAAACAAAGTAGACTAATGAGGCCAATCTCTGGAAAAGTATA GAAGTTTTAATCTGATGTCTGGTAATAATCATGTTCTGTGAGCTTAAACTTCAATTGAGTTTTGGTTTAATCATAGCCCA ACAGAGCCTTCATCAACAAAAACAGTGAAGTCACAAGAAGTAAGCCGGAGGTTATGCTGTGGTTAAGATAGGCACTTTGC ATGAGTTAGGTCATAGACTCTTAGGAAATTGAGCAATTTCTATAGATATGATTGAAATCACCACATCACTACTATACTAA ATAATAATCAAAGAAGTATCATAAGATATACACTTGGGCCCCCATTTCCATCTCGTTTTAAAAAAAAATCCAAATCTATT GGAATAGAACCCATGCAGGGTTTGTACATAGTTAGAATGAAGAGATCACTAGCAGCATCCATTTGGTTTAATAAAATTTC ACAGTTGGGCCTTTCTTCTAGGTCAGGACTTCTTTTGATGTCCTAAATTGTTCTTGTAATTCCAACCTTAATGTAGTGAT AATGTAGTGAAGACCCTCAAGAATACGACTCCTAAGAAGTAAGAATCTAACTTTCGACTTATGGTTTCTATCAACCAACT CTAAGTTTTAATCACAAGGACCGACACCCATTGGGTTTTGGTAAGAACTTTGGAAATGTAGTATCAATATCTGCTGAAGT TAAATTACTAAATTAGGAATTAGGCATGAGAACCTTTGCCACAAGATAATCAGCCAAAATTCCATTGCCACCAAGCAACT CTCGCCCCAGGGCAGCTGTTTCTCTTGCCCTCAAGGAGATCCACGACTGAAAAATGATGACAAATTATTGTAAGTTATCT ACCAGTACCACATACCAGTATTTTAAAAACCGAACCGATCATTAAATCAATGAAGGTAAACTGGTCAGAAACTTTCTGGG GTTTTCTTTTCTTTTATTTTGTGAGTATAGTATGATTATAAATGTGGATAGGTTATGAGTTACCTTCCCCAAGCTAGCAT GACCCGGCGTCAGTTTACCACTCTCATACAACTTACACAGGCGCCAACCAACAAGAACCATTGCTTGAACGTTACCAAGC ATTTGAACAAGTTTCTGTTGGTTGATTTGGAAAGCTGCTAATGGTGCTCCAAACTGTTTCCTTTCCTTAAGGTACCTTTT AATGACATAGAATTTTCAGCATGGTTTTCAGTGAAAGCTTTGGTTGAAGCATACTATTAGCATGCTATATAAGAATACCT ATGACACATATCATAGATGCCCATTGATACACCAATTGGCTGCCAGCAAACCATTACACGAGAAGCAGCAAGTACCTGTT TTAAGATAGCAAAAAATAAGTATACAACATGTAAATTATAAATACAAAGTTATAATGATGAAGTAACCAAGAATTGGATA GAGAATAATGAACTAATACAAAGACATGGGAAAAGAAAATTAGAATGTTCTCGTTTTTCAGAAGCAGATGTGACAGTATT TGAGTGTGGCATATTCAACTGGTTGGAATGCTAATAGCCTTTAAGTGCACTAGCAATAAATGGATAGTGGTAGAACCAGA CAAATGCTGATCTTATTCATAACCTAAGACATGCAGAATCTGATTGAGCCAAGGAGTATGTTGGGTTGGAGGAGGATCAG TTGCTAGATCCAAGTCCAACTCCATTCAAACAACTATTTGGAAGGTCAAACCCAGAAAGAACCGCAAGGTGACCTAAGGA ACTGCCATGTAGGGGGGTGAGTTAAGGAACTGCTGTGTAGCACAGTTACTGAGAGAGGGAAGAGTTAGTTAACAGGGCGA AAACTAAACACATATTTAGCAAAATAAACAATAGCTTATTGAATTAGATACTATAAAAATATTGAGGAGGTAAATACACT ATTTATTAAATACCATTCTATTAAGAAAAAAATTTCTCTGGGGCAGGTCCTCCAACTATAGGCTATCCTTCAGAGGAAGC AATTCTGATCGAGTCGGGTGGAACCATTACAGTGACAAAACTCTCCCTTTGAATAATTAACACACAGCTACATAATCAGA GTAAGTTATGTTTCTATCTATCTATCTATATGTTGTAGTATAGGGAAGTAAGGGGGTGTGAAGTGTGAATCTTAGAGCAG GGAAATATTCCCTGTAAAAATATTCTCTGTAGGAGCCTTGGCACTGGATCTTTTCTTCAGAAGCTTACCTGTTTGAATTC AGTAAAATTTCCTGTTCAATTCAGAAGTTGTGTCCTATCAGTCCTACAAAGGCTCTAAGAGGACACAGGAACCAGAATTG ATAAAAGCTCTACTACTTCATCAAGTAATTTCTGTTATATGAACAACAAGATGTTTACAGTAATTTTTTGTTGAAAATGA TAAAATCACACAATAATTCCTGAGAACGAAAGCACCGTACAAATTTACCTTGTTTGTGTCTTGAAAAGAATTGAGTTCTG CTATTCTATCCTCATCAGGGACAAAAAGTTTCTTCAAAACAATGTCTCCATTTTGTACGATCCTAAGTCCAATTTTATTC TCTATTTTTGTGGCTGTTAAACCAGGTGCATCTTTTTTTACAATATAGCTGAAATAATATGCATAAGAAAAAGGTAAATA AA
CDS sequence (LotjaGi1g1v0442700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACTGACCATGCAAACGTTGCTGCATTTCAGGCATTTCTCCAAGGGTGGATGGTGCGGCAAAGAGCCTTTCTTGACGA GCTTCTTTCAGCTCAGCAGCACCTTCAAGAGTTGCAGGATGCTGATATGAGGCAACTGATCAACAGGGTCCTCTGCCACT ATGGACAGTACTATGAAGAGAAATCAAGGATTGCCCACCAAGATGTTCTGCTTGTTTTCTCACCTCCATGGTTCAGTTCA TTCGAGAGATCATTCCTTTTGGTGGCGGGGTTCAAGCCTGGAATGACGTTTCAGGTGGTGAACTCATCTGTGGCTGACTT GTCAGGAGAGCAGAGGCAGAGGTTGAGTCAGCTGAGGCAAGAGACCAAGAGGGAAGAGAGGGACCTCAACGATGAGCTGG CTAAAGTTCAGGAGGGTGTGGCGGCGCCACCGCTTGTGGATTTGGCTAGAAGCCATGGCAGGGTGTGTTTGAGTAGGTCC TTCATGGCAGAGGAGGGTGTTGTGGTTCCAAGCAGTTTCAGGGAGGTACTGGAGAATCTTGTGGAAAAAGCAGATGCTTT GAGGTCAAACACAGCTTGGAAAGTTGTGAGGATTCTCAGACCAGCTCAGATTATCAACTTTTTGGTTGCTGTGGCTGAGC TTCAAATCAGGATCAGGTCTTGGGGGTTGGATAAGGATGCCCAAGATGGAGGCCAAGGATGA
Protein sequence (LotjaGi1g1v0442700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTDHANVAAFQAFLQGWMVRQRAFLDELLSAQQHLQELQDADMRQLINRVLCHYGQYYEEKSRIAHQDVLLVFSPPWFSS FERSFLLVAGFKPGMTFQVVNSSVADLSGEQRQRLSQLRQETKREERDLNDELAKVQEGVAAPPLVDLARSHGRVCLSRS FMAEEGVVVPSSFREVLENLVEKADALRSNTAWKVVRILRPAQIINFLVAVAELQIRIRSWGLDKDAQDGGQG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 232 | 230 | 1.5E-87 | – | |
| PANTHER | 3 | 232 | 230 | 1.5E-87 | – | |
| ProSiteProfiles | 7 | 228 | 222 | 30.213 | ||
| Pfam | 26 | 101 | 76 | 3.8E-22 | ||
| Coils | 112 | 139 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Transcription, DNA-templated | The cellular synthesis of RNA on a template of DNA. | ||
| Molecular function | Sequence-specific DNA binding | Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding. |
Expression pattern of LotjaGi1g1v0442700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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