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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0449800 |
| Transcript ID | LotjaGi1g1v0449800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | SCAR2, putative; TAIR: AT2G38440.1 SCAR homolog 2; Swiss-Prot: sp|Q5XPJ9|SCAR2_ARATH Protein SCAR2; TrEMBL-Plants: tr|G7KV36|G7KV36_MEDTR SCAR2, putative; Found in the gene: LotjaGi1g1v0449800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:94887371..94895875) extracted from Lotus japonicus Gifu genome v1.2.
TTCACATTCAATTATTAATTATTCACAAGAAAACAGAAACAAAACAAAGAAACTGAAAAGTCATTCTCTCTCTTCTTCCA TTTTCCACGCCGTGACGAGCGGCAACAGCCGCGTCGCCGGAACTGCGATCAAAGAAAGCAACCGGAACACTGAAATTGGA GCCAAATTAGGGCTCTGCGCGCGGTTGCCACAATTTGAAGAATGCCGGTCTGCAGGTACCACATTCGGAACGCGCAATGC CTGGCGGATCCGGAGCTCCGCCGTGCCGCCGGAAAAGATGACTCTGAGGCTCTTCTTGAAGCCGTGGCTGTGGCTGGACT CGTCGGATTCTTGCGTCAGCTCGGCGATCTTGCTCAGTCAGTTCTCACATTCTCTCTCTAAAACTGTTTTTGGTAGTTGC GTGACATTTCCGGTGAAGTAGTAATGGTGGCGGTGGTTGCATTCACTGCTTTAGTGGTTGCATTCACTGTTAGTTTAATT GAAATAGAAAGGTTACACTTTTAACAAAACAAAAAAAAAACACTTTATTTTCATAAATGTTTTTTTTTTTGAACCATTAT TTTCATAAATGTAAAACTGATAGATTTTGACTTTCCTTCAAAAAGTAGTATCTATTTTAATTTTTAGAAAATATAAAAGA AACTTGCGTTTATTCCAGCCAGCTAACAACATACCAGCAGTACTATTTTTTATTATTAAATATCATAACTAAAAATTATC AATTTTACCCCCCCAAAACAAAAGGATAGAAATAAGAGTTTAATGTATATGCTCGTGATATTCATTTATTCTATGTCACA TAGAATAAATTATTACGTTCTTCTTTTATTTAAATTAAATTAAAATGGTATTTTATGATGTAACGGAAAATAATTGGATG TCTGTGAAAAATTAAAAATAGTTTAGACGGTGTGTATCTACAATTATCTCTAGAAATAATAAGCTATCATTTAATGCAAT ATTGGAACTTTTCATTAGGATTTAGGAAGAAAACGTTAGTCCTTGATTCCTGGAAAAAAGAGTTGAAAACGTAATGTGTT CATAGGGAGTAGGGACCAAAATACTAAAACGTAATGGTTCTTGCCCTTGGTTTAATTTTTATTTTTTTATGAATATCAGG ATCAAATTGGTAGATAGTAGAATTTCTCAATGATTTTCCTTTAACTAGTGCCTTTACTCTTTGATTAATGTTGTTGCTGT TGCCTGTTGGAGCTGTTAGTGGAGTGAGCTTTGGTTCACCGATGCCATTTTTTTATTCTTCACTTTGTTAGTTTGATCGG TTGGTAAATGGATGAAAATGTTTGATTGAGTTGAAACTTTTAAGGAAAATGACTTTTGTATTTTGGAGGTTGGATTAGGT GGCTGAATTTGAGTTCTTTTTTTTCTTCTTGCACTTTCCTTAATTGTGCTGAGTGAAACAAGCCTGGAGTAGGGATGGCA ACGGGTAGGATCGGACACGGGTTTTACAATTACCAAACCCAAACCCAAATCCCAGAACCCAAACCCAAACCCAAACACAA ACCTTATGGGCGATAAAATGAAATCCATGCCCAAATCCATTGGGTTTCGGATTTGCCCGAAACCCAAACTCAAACTCATT AGTTACGTAGCAACTCAATCCAGAACTTACTTTCATATAAAAAAAAAGTGAAATTCATAGAAAGAAAAAAAAAACAAATA CTATTCATCATCCCCATCCATCACTAAAGTGAGACAACAATAGTTTAGAGTTTACTTTCACAAACATATAAAAGTACAAT TAATCATCAAACACTAAGAACAAAGTTTATAAATATATATATGTACGAGGTTTTTTTTTGTAATTTTATGTTTAGGTATC TTTGGGTTCGGGTTTGGGCGGGTATGGGCACGGATTTAACTAATACCAAACCCAAACCCATAAATGGCTACAGTAACGGG CAAAACCCAAACCCAAACCCAAATCCAGTCAACTCGGATTTTGCCCGTCAAATCGGATCGGGTTCGGGCGGGTACCCATG GGTTTGGGCAAAATTGCCATCCCTAGCCTGGAGTTTGAAAAACTGAAAAATAAAGTTCTCATTTAGTGCAATATTTAGTT TTTGCTTATTAGTGTTATTTCTGTTGGTGTTGTTTGTTAGTGAGTGGCGTGAGCTTTGGTTCAGCCATTTTGTCTTTTCC ATATGTTAGGCACTTTATTAGTTCGGTTGGTAGTTAATGGAGTTTGGAGGAATATGGTTTTCTATGTTGGTGGTTAGATT AGGTGGTTGTACTTGAGGTGTGATAGGTTCTCTTTTTCTTTTCTTATTAGATTACTGTTCACTAACATGTACTAGTAGAT TTGAATATTTGAAACTGATTTGAGGATTGGTTTTTGACCCTTATTTTCGTTTTGATTTTAATTTAAGAATTTAATGTCTT GTCTTTGTGTCTGCTTCCCTAATCCTTTATAGGATTTTGGTTCTCCCTTTTTTGTCTGTATGTATAGTGACTTTTGGGAG GATAAGAAAAAAAGGATGGAAAATGGGCAATTGTTTATATTCATGGGATTCAAGGAATTTATAGCGACTATGCGTGTTTG TTTTTCGGTTGAAAAAGATAAAAGCATATTCCTTCAAATCGACTCTTTGGTTCCGCTGGCTTTTATGCCTTAAAATTCAG GCGAATGTACATTAGAGACGTTCCTAACTAAAAAACAAACACAACCAGCATATCGACAAACACAGCCTAACATATCAGAT CATGTAAATATTAAGGATTCAAGGGCATCTTAGGATCTGATATCCACTACCTCCTCCTGGACCCCCTAGATTAAGCCAAG GTGTTAAACTCATAAACTTAATTTCAGGACTGCTTTTTGTAGGAAAATTTGTGGACTTTGCCAGAGTTCTGCTAATCCAA GCATTTTGTTCCCTGCAGTTAATTATATAAAAATTTGTTCCATTTTGTAGGCTTTTCAGCATCAACATTTAACTTTCTAA ATTATTTATATTACAGCCATTAGTAACCTCTCTGAGTTGAACTGTATCAATTTGGTTAGGTTTGCTGCTGAGTTATTCCA TGACTTGCATGATGAAGTAATGGCTACTGCTGCTAGAGGCCACAACCTTATTTCTCGTGTTCAACAGCTTGAGGCTGAAG TTCCTGCAATTGAGACAACTTTTTTGTCGCAAACTCATAATTTCTCATTTTTAACAAATGGAGGTTAAACTAATCAATCT AGTGTCCTTTTTATTACTATTATTTATGTTTGTAATATGACCTGTAGGTGGTAATAGTCCCTTGATGAATCTACATGCTT GTTGCATTGCAGGGATTGACTGGCACCCTAATCTTCAGTCTGAACAGAAACTTGTTACACGTGGAGACTTACCTAGATTC ATAATGGATTCATATGGAGAATGCCGTGGTCCCCCTAGACTCTTCCTTCTGGACAAGTATGGGGACCTGATTCATTGAAC ATAAACAATTTAAATTAATTATCATGTTGTAAGTATCTTTGATTTTTCTTTTTGGTCTACAAGGTATGATGTGGCTGGTG CTGGGGCTTGTTTGAAGCGTTATACTGATCCATCATTCTTTACAGAAGACTATGCTTCCTCTGTAACAAAAACTACTGAA GTAGTTCACAGGGAAAAAAGAATTCGTAAAGTCAGGGTACTAGCACAGATTCTACCACTTAATGACAACTCTATGCAATA AAAAAATTATAAATGCAAATTGGAATATATAATGTGTATATTTTTAATTTTGAGCAGATGCAAGGAGTGGGATCAAGGAA TGGTGAAACCCCTGAAGTTTTACCATCACATACAAAGTGAGCTCCAATAATTTTATTATGGTGGATAATTTGTTCTTCTG GTTTGTTAAATGCACAAACTTCTTCAAATGGCTAATGGGTGACTGAATGTACTTATATTGTTGCAGACTACATCAGTTGT TTCTTGAGGAGCGTATTGAGGATACTTGTAGTGATCCTGCTCGTCTTGTGAAGTTGAGAAAAAAACAATTGGATGGATAT GCTGTGGAAGCAAAAAGTGGGAGAAGTTACATGGAGAAAATTCTGAAAATGCCCTCACCAGACTATAAAATGGTTTATGA AACTTCGATTGTTCCACAGCCTGTGAAATTGATGTCAGATGATACTAGTGAAACTAGGATTAAAATACTAGAAATCAGTA GCAATGCTCCTCGGAAAAGGTCTTTGGGAAATGATAACACACATTCTTCATGGATTGAGCAGGAATCAGAACTGAATCCA TACTCAGAAATGGATAGGGAGACAAATAGATATCTTGGGAAGGAGCATGATCAAATCTCTGCCAGTGTCACAAATGAAAT GTCTTCTAATAATCTCAAATTACATGATGAGAAAGAATTGGTTGCTGATGAACAAGAGAAAAGAGAATGTATCCTAGATG GCTACCGGTCTGATGATGCTATAAGTGAGGTTGATGATTACATGGATGCATTAGCTACTGTGGAGTCAGAATGTGAATCA GACAATGAGTGTAGACTTCAGAACAGCGTATTGAATGCTCAAAATGTGACCGATTCAAATACATATCAAATGGATACTCA ATTTTCAGACTCTCAATCATTTGGAGACTCTTTCACTTCTGAAGAAATTAGTTCGACTGAGCAAGACAGAAATGAAGAGC AAGTGCAAGCTCGGTTTCCAGATTCTCAATCTGTTGGAAACTCCACACGAGAGATTGAAAATAGGCCATCCAATTTTCTT CTACAAACTGTTGAGTTGCAAAAGACGTGTGGTCAGTTTGTCATGCAAGTTGATACACTTGATCAGGGGGGAGCAATATC TCATTCTAGACCAGTTTCTTCTTCTGGTTCATCTCTGATGGAGCAAGGATGTTTATTGTTTCCTTCAGATCTTGGAGCCC CCTCACTGGTTTCCCCACTTAGAGGGACTCAATTGGATGAAACACCATCTAGCCCTCTTGAACTACATTTAAGGTTAGAA GATGATGAAGACAGGAAGTGTCTTGCTGAATCTATAGCTTCCGTATCCAGTACCTTCACCCCAATAAAGGATGACGCTTG CATAGTGGTTTCATATGATAACAATTCTTTGAACAACTTACATGTTTGTGATCCACATATTCATTCTAATGCTCTATTAC AAGATTCAAATGATATAAATTTTTCTAATGAAGATGAAAGTGGTGATCCTTCTGATATCAAAGTGTTGCAGTCCAAATCT CTTAATGGATACTCTAGTGAAATTTTGGTTGGTGGAGGTATTGGTTCACAAGGAGGGGATCCCGTTTGCCTGTCCATGGA AGCACACCCGAATTCAGGCACTAAGGTGCTGCTTGATGACCGAGATTTAAAATCTGAGGATGATAAAATAGCTACCCAAC TTAACTCAGACGATTTATTTCCTGTTGCGGATACTACACTAGAGAGTAGCTTTACAGAGGAACCATGCTCTAGCCATACA CTTGGAAATCCACATAATGGACCAAATTCAGCAGAAATTGAAGTTCTGTACCGTGATCAGCAATCAAATTTTGAAGTGAT GCCAAGCATAATGCCTGACGATGAAATAAGTGGATCCACCTGCAGTTCGGATCCAATTGAAGATGAGGATCATATTAAAC GTCCACCTTGTGATGACACAAGTAAGGATAATCATGTCATGGTAAATGATAATTTCAGTGTAAAAGTTCAATCAGAAGAT CAGCCTGTATCTGCTCTTTCTTCTGTCAATATTGCTGAAAATGATGCAAGTATTGTTGATTGTCTAGCGTCAAATTCTGT TTCTTCTCCATCAAGAGATCTATCAGATTTGCATGAACCTTTCCTCTGTTCTTCAGATTCACATCTGATTGAAATGGAAT CCCATGATGTAGATTTAACTAAAATATCTGTTGACTTGAACGCTGATAAGATTGAAAGCAAAGTGGAACCTTCTCCAGAT ATCATATTTTCTCCAATATGTAGTCTTACAACGTTGGAAGAATCTCTTTCTACTTTTGCTGATCCTCATGAGAAAGAGAT TGAAGTCAATGAAGCAGTTCCTGGAGAGTCTTTGGCAGAGTTGACAGCACATGAGAAAGAGATGGAAGTCAATGAAGCAG TTCCTGGAGAGTCTTTGGCAGAGTTGACAGCACATGAAGTAGAGGATCAACCAGAAATTGCATTTACTGATGTACAGTTG AACCTGAACAGACCAGTTCCCTGTGATCCTGTATTTAGAATATTTAATAATTTTCAACATTCATCTCTTAAGGAGAAATT CCAATATGGTTCTTCGATCAATGACATGGAAATGGTGACTTTATGTTCAGAGCAAGACTCTCAGAGATCAGGATCTATAT TAGCATGCCAGAATGATATACAGAACAGTAAAGATAGTTTGTCACCACCTTTGAATGATCAACTAGAGCCTGAACAACAG GATGCAAAATTTCTGCTCAGAAATGAAGAAAGTTATACCTCTGAGAAGTTTCAAGCTCAACAGATGCAGTTATCTAATCA GTTGGAGCAGGAAAGAGTCTCTGATGCTGCTTCCAAGTTTACTGCTGAAGTTCATCCAGATGAACCTTCACATGATTCCT CACCAAAGTCTTCTGGGGAGACTAACCCAACAAAACATGTCATGGATCCATTGAAACCTCTTCTTTCCGATCTCTTTCCA AAGGAAACTAAAACCAATGTTGAGGAGACGCCACCTATGCCCCCTCTACCACCAATGCAATGGAGAACGAGCAAGGTTCA AGTTGCTTCCCTAGTTTCACAAAGAGAAGAAAAAGAAGCAAGTCAAGCGTCATTCCAACCATTACAGCCAGTTAATCATG ATGATAAGGCTCAATTTGGTTTAGCAACTCCTGAAAGAGAGACCTTGCTGAGTCATAATCCATTTTTTCCTGTCATAGCT CTGGAAAGCCGTGACCACCGACACTCAGCTGGATTATCAGCGGGTGTTTCAGAGCGCGCTTCTGCTATTCCTTCGCAATT TCCTGTCATGTTAAATGAAACATCTATGGTGGAATCTCTGGACAGGCCTCCACATGGATATGCAGTTGCTTCTGAGGAAC AAAGGGTATTGAATTCAAGTCCATGCCCACCAACACTGCCTGAAGAATGTGCTATTTCTGGGACTGATCCCATCTTTCAG CAAGAAAAACCAACTCAATCTCTAAGTAAATTAATGGAAGAGACTAGCTTAGAAGTTCAAACACTTGAGCAATCTTCCAT TAATTTGAAAAGGGAACAAGGAGATCCTTCAGTCTTGCCTGTGTCACCATCCGGTTTTGTGCAGCCCAATCACAGTCCGG CATTGTCATTTGACGCATCTACTCAAATATCAAAGTTTCATAGTGAAATGCAAAATGGAAAACCAAAGAATAAGCTTACT CCTCCTCAGGCCCCTTCAAATGATGTTGTTGCTGCTCTTGACAAAAGCAGGGTACTGATAATTTTTTTTACTTGTAGTAT GTGCTCTATATTTAGTTTTAATTCTTGCATTACACACTGCCTTTGAACCATTGCAGCTGAGGAAAGTCAGTGAACGTGTT AGGCCTCAGATAGCACCAAAGGAGGATGAAAAGGATTCACTGTTAGAACAGATAAGAATGAAGGTTAGTGCTTGCAACTT TTATCTTGTTCTCCATGCTATATTTACCCTCTTGTATCAAAACAATCTTGTATTTATAAATGATATTTTTATCAGTCTTC AGCTTGACCTCACTTAGTAAAATAATGTTTTTGTTGTTGTTGTTGTAGTCTTTCAACTTGAAGCCTGCTGTGCCTAAACG TCCCAGCATTCTTGGCCCAAAAACGAACTTGAGGGTTGCTGCAATCTTGGAGAAAGCAAATTCTATTCGTCAGGTCTGCC ATTCTCTGTCAACTTTATTACAATAGTCTAAGCTCCTCTCTCTCTCTCTCAGCACCATAGTACCACTTCACTTCAGGCTA AACTAAACTAATGTCAATTAATGAAACAGGCATTGGCTGGAAGTGATGAAGATGATGATGCTGATAGTTGGAGTGATTCT TGAATTTACTACAGAATGAAAAATAGTCATCAGTGTTGGTGGATGTTAATTTTTCTATTCTGGTTCTTTCCTTGAATTTG GGGTTAAAAGTCATTCACCTGTGTAACGAACAGGAAATGTACTCTGTTCACACATGAAGTTCTGGACAAGATATGTCCGT CTCGATTCCTCCGAATTAAGAAGGCGTAAATGTGTGAAACTCATTTCAGTGTGGGACTCAGGCTTAGCACCTGAGCACTG TATCAATTCATATATCAGCTAATGTGCATATTTGTATATTGTGTTGAGGTTGAGGTTGTCATAATCATAATTTTTTTTTT GATATAGTCATGACTCATGAGTACCCATTTTTGTAATTCTGTAATGTAGAGGCGTACCGATGATAGTTCGTCTCATGTAT CATGGAGCTCATCTATTCGTGTCCAATACAATAGTATATATATACATATACACAACACGTGAGTAAAAATACTTTCAATG TGCAGTTTTCATCATTTATTCATTG
CDS sequence (LotjaGi1g1v0449800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCGGTCTGCAGGTACCACATTCGGAACGCGCAATGCCTGGCGGATCCGGAGCTCCGCCGTGCCGCCGGAAAAGATGA CTCTGAGGCTCTTCTTGAAGCCGTGGCTGTGGCTGGACTCGTCGGATTCTTGCGTCAGCTCGGCGATCTTGCTCAGTTTG CTGCTGAGTTATTCCATGACTTGCATGATGAAGTAATGGCTACTGCTGCTAGAGGCCACAACCTTATTTCTCGTGTTCAA CAGCTTGAGGCTGAAGTTCCTGCAATTGAGACAACTTTTTTGTCGCAAACTCATAATTTCTCATTTTTAACAAATGGAGG GATTGACTGGCACCCTAATCTTCAGTCTGAACAGAAACTTGTTACACGTGGAGACTTACCTAGATTCATAATGGATTCAT ATGGAGAATGCCGTGGTCCCCCTAGACTCTTCCTTCTGGACAAGTATGATGTGGCTGGTGCTGGGGCTTGTTTGAAGCGT TATACTGATCCATCATTCTTTACAGAAGACTATGCTTCCTCTGTAACAAAAACTACTGAAGTAGTTCACAGGGAAAAAAG AATTCGTAAAGTCAGGATGCAAGGAGTGGGATCAAGGAATGGTGAAACCCCTGAAGTTTTACCATCACATACAAAACTAC ATCAGTTGTTTCTTGAGGAGCGTATTGAGGATACTTGTAGTGATCCTGCTCGTCTTGTGAAGTTGAGAAAAAAACAATTG GATGGATATGCTGTGGAAGCAAAAAGTGGGAGAAGTTACATGGAGAAAATTCTGAAAATGCCCTCACCAGACTATAAAAT GGTTTATGAAACTTCGATTGTTCCACAGCCTGTGAAATTGATGTCAGATGATACTAGTGAAACTAGGATTAAAATACTAG AAATCAGTAGCAATGCTCCTCGGAAAAGGTCTTTGGGAAATGATAACACACATTCTTCATGGATTGAGCAGGAATCAGAA CTGAATCCATACTCAGAAATGGATAGGGAGACAAATAGATATCTTGGGAAGGAGCATGATCAAATCTCTGCCAGTGTCAC AAATGAAATGTCTTCTAATAATCTCAAATTACATGATGAGAAAGAATTGGTTGCTGATGAACAAGAGAAAAGAGAATGTA TCCTAGATGGCTACCGGTCTGATGATGCTATAAGTGAGGTTGATGATTACATGGATGCATTAGCTACTGTGGAGTCAGAA TGTGAATCAGACAATGAGTGTAGACTTCAGAACAGCGTATTGAATGCTCAAAATGTGACCGATTCAAATACATATCAAAT GGATACTCAATTTTCAGACTCTCAATCATTTGGAGACTCTTTCACTTCTGAAGAAATTAGTTCGACTGAGCAAGACAGAA ATGAAGAGCAAGTGCAAGCTCGGTTTCCAGATTCTCAATCTGTTGGAAACTCCACACGAGAGATTGAAAATAGGCCATCC AATTTTCTTCTACAAACTGTTGAGTTGCAAAAGACGTGTGGTCAGTTTGTCATGCAAGTTGATACACTTGATCAGGGGGG AGCAATATCTCATTCTAGACCAGTTTCTTCTTCTGGTTCATCTCTGATGGAGCAAGGATGTTTATTGTTTCCTTCAGATC TTGGAGCCCCCTCACTGGTTTCCCCACTTAGAGGGACTCAATTGGATGAAACACCATCTAGCCCTCTTGAACTACATTTA AGGTTAGAAGATGATGAAGACAGGAAGTGTCTTGCTGAATCTATAGCTTCCGTATCCAGTACCTTCACCCCAATAAAGGA TGACGCTTGCATAGTGGTTTCATATGATAACAATTCTTTGAACAACTTACATGTTTGTGATCCACATATTCATTCTAATG CTCTATTACAAGATTCAAATGATATAAATTTTTCTAATGAAGATGAAAGTGGTGATCCTTCTGATATCAAAGTGTTGCAG TCCAAATCTCTTAATGGATACTCTAGTGAAATTTTGGTTGGTGGAGGTATTGGTTCACAAGGAGGGGATCCCGTTTGCCT GTCCATGGAAGCACACCCGAATTCAGGCACTAAGGTGCTGCTTGATGACCGAGATTTAAAATCTGAGGATGATAAAATAG CTACCCAACTTAACTCAGACGATTTATTTCCTGTTGCGGATACTACACTAGAGAGTAGCTTTACAGAGGAACCATGCTCT AGCCATACACTTGGAAATCCACATAATGGACCAAATTCAGCAGAAATTGAAGTTCTGTACCGTGATCAGCAATCAAATTT TGAAGTGATGCCAAGCATAATGCCTGACGATGAAATAAGTGGATCCACCTGCAGTTCGGATCCAATTGAAGATGAGGATC ATATTAAACGTCCACCTTGTGATGACACAAGTAAGGATAATCATGTCATGGTAAATGATAATTTCAGTGTAAAAGTTCAA TCAGAAGATCAGCCTGTATCTGCTCTTTCTTCTGTCAATATTGCTGAAAATGATGCAAGTATTGTTGATTGTCTAGCGTC AAATTCTGTTTCTTCTCCATCAAGAGATCTATCAGATTTGCATGAACCTTTCCTCTGTTCTTCAGATTCACATCTGATTG AAATGGAATCCCATGATGTAGATTTAACTAAAATATCTGTTGACTTGAACGCTGATAAGATTGAAAGCAAAGTGGAACCT TCTCCAGATATCATATTTTCTCCAATATGTAGTCTTACAACGTTGGAAGAATCTCTTTCTACTTTTGCTGATCCTCATGA GAAAGAGATTGAAGTCAATGAAGCAGTTCCTGGAGAGTCTTTGGCAGAGTTGACAGCACATGAGAAAGAGATGGAAGTCA ATGAAGCAGTTCCTGGAGAGTCTTTGGCAGAGTTGACAGCACATGAAGTAGAGGATCAACCAGAAATTGCATTTACTGAT GTACAGTTGAACCTGAACAGACCAGTTCCCTGTGATCCTGTATTTAGAATATTTAATAATTTTCAACATTCATCTCTTAA GGAGAAATTCCAATATGGTTCTTCGATCAATGACATGGAAATGGTGACTTTATGTTCAGAGCAAGACTCTCAGAGATCAG GATCTATATTAGCATGCCAGAATGATATACAGAACAGTAAAGATAGTTTGTCACCACCTTTGAATGATCAACTAGAGCCT GAACAACAGGATGCAAAATTTCTGCTCAGAAATGAAGAAAGTTATACCTCTGAGAAGTTTCAAGCTCAACAGATGCAGTT ATCTAATCAGTTGGAGCAGGAAAGAGTCTCTGATGCTGCTTCCAAGTTTACTGCTGAAGTTCATCCAGATGAACCTTCAC ATGATTCCTCACCAAAGTCTTCTGGGGAGACTAACCCAACAAAACATGTCATGGATCCATTGAAACCTCTTCTTTCCGAT CTCTTTCCAAAGGAAACTAAAACCAATGTTGAGGAGACGCCACCTATGCCCCCTCTACCACCAATGCAATGGAGAACGAG CAAGGTTCAAGTTGCTTCCCTAGTTTCACAAAGAGAAGAAAAAGAAGCAAGTCAAGCGTCATTCCAACCATTACAGCCAG TTAATCATGATGATAAGGCTCAATTTGGTTTAGCAACTCCTGAAAGAGAGACCTTGCTGAGTCATAATCCATTTTTTCCT GTCATAGCTCTGGAAAGCCGTGACCACCGACACTCAGCTGGATTATCAGCGGGTGTTTCAGAGCGCGCTTCTGCTATTCC TTCGCAATTTCCTGTCATGTTAAATGAAACATCTATGGTGGAATCTCTGGACAGGCCTCCACATGGATATGCAGTTGCTT CTGAGGAACAAAGGGTATTGAATTCAAGTCCATGCCCACCAACACTGCCTGAAGAATGTGCTATTTCTGGGACTGATCCC ATCTTTCAGCAAGAAAAACCAACTCAATCTCTAAGTAAATTAATGGAAGAGACTAGCTTAGAAGTTCAAACACTTGAGCA ATCTTCCATTAATTTGAAAAGGGAACAAGGAGATCCTTCAGTCTTGCCTGTGTCACCATCCGGTTTTGTGCAGCCCAATC ACAGTCCGGCATTGTCATTTGACGCATCTACTCAAATATCAAAGTTTCATAGTGAAATGCAAAATGGAAAACCAAAGAAT AAGCTTACTCCTCCTCAGGCCCCTTCAAATGATGTTGTTGCTGCTCTTGACAAAAGCAGGCTGAGGAAAGTCAGTGAACG TGTTAGGCCTCAGATAGCACCAAAGGAGGATGAAAAGGATTCACTGTTAGAACAGATAAGAATGAAGTCTTTCAACTTGA AGCCTGCTGTGCCTAAACGTCCCAGCATTCTTGGCCCAAAAACGAACTTGAGGGTTGCTGCAATCTTGGAGAAAGCAAAT TCTATTCGTCAGGCATTGGCTGGAAGTGATGAAGATGATGATGCTGATAGTTGGAGTGATTCTTGA
Protein sequence (LotjaGi1g1v0449800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPVCRYHIRNAQCLADPELRRAAGKDDSEALLEAVAVAGLVGFLRQLGDLAQFAAELFHDLHDEVMATAARGHNLISRVQ QLEAEVPAIETTFLSQTHNFSFLTNGGIDWHPNLQSEQKLVTRGDLPRFIMDSYGECRGPPRLFLLDKYDVAGAGACLKR YTDPSFFTEDYASSVTKTTEVVHREKRIRKVRMQGVGSRNGETPEVLPSHTKLHQLFLEERIEDTCSDPARLVKLRKKQL DGYAVEAKSGRSYMEKILKMPSPDYKMVYETSIVPQPVKLMSDDTSETRIKILEISSNAPRKRSLGNDNTHSSWIEQESE LNPYSEMDRETNRYLGKEHDQISASVTNEMSSNNLKLHDEKELVADEQEKRECILDGYRSDDAISEVDDYMDALATVESE CESDNECRLQNSVLNAQNVTDSNTYQMDTQFSDSQSFGDSFTSEEISSTEQDRNEEQVQARFPDSQSVGNSTREIENRPS NFLLQTVELQKTCGQFVMQVDTLDQGGAISHSRPVSSSGSSLMEQGCLLFPSDLGAPSLVSPLRGTQLDETPSSPLELHL RLEDDEDRKCLAESIASVSSTFTPIKDDACIVVSYDNNSLNNLHVCDPHIHSNALLQDSNDINFSNEDESGDPSDIKVLQ SKSLNGYSSEILVGGGIGSQGGDPVCLSMEAHPNSGTKVLLDDRDLKSEDDKIATQLNSDDLFPVADTTLESSFTEEPCS SHTLGNPHNGPNSAEIEVLYRDQQSNFEVMPSIMPDDEISGSTCSSDPIEDEDHIKRPPCDDTSKDNHVMVNDNFSVKVQ SEDQPVSALSSVNIAENDASIVDCLASNSVSSPSRDLSDLHEPFLCSSDSHLIEMESHDVDLTKISVDLNADKIESKVEP SPDIIFSPICSLTTLEESLSTFADPHEKEIEVNEAVPGESLAELTAHEKEMEVNEAVPGESLAELTAHEVEDQPEIAFTD VQLNLNRPVPCDPVFRIFNNFQHSSLKEKFQYGSSINDMEMVTLCSEQDSQRSGSILACQNDIQNSKDSLSPPLNDQLEP EQQDAKFLLRNEESYTSEKFQAQQMQLSNQLEQERVSDAASKFTAEVHPDEPSHDSSPKSSGETNPTKHVMDPLKPLLSD LFPKETKTNVEETPPMPPLPPMQWRTSKVQVASLVSQREEKEASQASFQPLQPVNHDDKAQFGLATPERETLLSHNPFFP VIALESRDHRHSAGLSAGVSERASAIPSQFPVMLNETSMVESLDRPPHGYAVASEEQRVLNSSPCPPTLPEECAISGTDP IFQQEKPTQSLSKLMEETSLEVQTLEQSSINLKREQGDPSVLPVSPSGFVQPNHSPALSFDASTQISKFHSEMQNGKPKN KLTPPQAPSNDVVAALDKSRLRKVSERVRPQIAPKEDEKDSLLEQIRMKSFNLKPAVPKRPSILGPKTNLRVAAILEKAN SIRQALAGSDEDDDADSWSDS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 90 | 90 | 9.8E-10 | – | |
| PANTHER | 1 | 472 | 472 | 0.0 | – | |
| PANTHER | 1 | 472 | 472 | 0.0 | ||
| Gene3D | 108 | 203 | 96 | 3.0E-12 | – | |
| MobiDBLite | 429 | 445 | 17 | - | – | |
| MobiDBLite | 429 | 479 | 51 | - | – | |
| MobiDBLite | 460 | 479 | 20 | - | – | |
| PANTHER | 473 | 925 | 453 | 0.0 | ||
| PANTHER | 473 | 925 | 453 | 0.0 | – | |
| MobiDBLite | 753 | 785 | 33 | - | – | |
| MobiDBLite | 767 | 785 | 19 | - | – | |
| PANTHER | 927 | 1237 | 311 | 0.0 | ||
| PANTHER | 927 | 1237 | 311 | 0.0 | – | |
| MobiDBLite | 1084 | 1114 | 31 | - | – | |
| MobiDBLite | 1150 | 1176 | 27 | - | – | |
| MobiDBLite | 1150 | 1174 | 25 | - | – | |
| PANTHER | 1237 | 1289 | 53 | 0.0 | ||
| PANTHER | 1237 | 1289 | 53 | 0.0 | – | |
| PANTHER | 1277 | 1461 | 185 | 0.0 | – | |
| PANTHER | 1277 | 1461 | 185 | 0.0 | ||
| Coils | 1295 | 1315 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Cytoskeleton | Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles. | ||
| Biological process | Actin cytoskeleton organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins. |
Expression pattern of LotjaGi1g1v0449800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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