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GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Cytoskeleton | Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles. | ||
| Biological process | Actin cytoskeleton organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: protein SCAR2-like isoform X2 [Cicer arietinum] gi|502147559|ref|XP_004506831.1| | 6 | ||
| – | PREDICTED: protein SCAR2-like isoform X1 [Cicer arietinum] gi|502147557|ref|XP_004506830.1| | 6 | ||
| – | PREDICTED: protein SCAR3-like [Glycine max] gi|356528322|ref|XP_003532753.1| | 8 | ||
| – | SCAR2, putative; TAIR: AT2G38440.1 SCAR homolog 2; Swiss-Prot: sp|Q5XPJ9|SCAR2_ARATH Protein SCAR2; TrEMBL-Plants: tr|G7KV36|G7KV36_MEDTR SCAR2, putative; Found in the gene: LotjaGi1g1v0449800 | 7 | ||
| – | Protein SCAR2; TAIR: AT2G38440.1 SCAR homolog 2; Swiss-Prot: sp|Q5XPJ9|SCAR2_ARATH Protein SCAR2; TrEMBL-Plants: tr|A0A0B2RJ71|A0A0B2RJ71_GLYSO Protein SCAR2; Found in the gene: LotjaGi3g1v0202300 | 8 | ||
| – | Protein SCAR2; TAIR: AT2G38440.1 SCAR homolog 2; Swiss-Prot: sp|Q5XPJ9|SCAR2_ARATH Protein SCAR2; TrEMBL-Plants: tr|A0A0B2RJ71|A0A0B2RJ71_GLYSO Protein SCAR2; Found in the gene: LotjaGi3g1v0202300 | 8 | ||
| – | SCAR family protein; TAIR: AT2G34150.2 SCAR family protein; Swiss-Prot: sp|Q6AWX6|SCAR1_ARATH Protein SCAR1; TrEMBL-Plants: tr|A0A0B2PFQ0|A0A0B2PFQ0_GLYSO Protein SCAR1; Found in the gene: LotjaGi4g1v0377900 | 9 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 14.29 |