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Field | Value |
---|---|
Gene ID | LotjaGi1g1v0458100 |
Transcript ID | LotjaGi1g1v0458100.3 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Protein kinase; TAIR: AT5G01920.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q9LZV4|STN8_ARATH Serine/threonine-protein kinase STN8, chloroplastic; TrEMBL-Plants: tr|A0A0B2S5V2|A0A0B2S5V2_GLYSO Serine/threonine-protein kinase STN8, chloroplastic; Found in the gene: LotjaGi1g1v0458100 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:96157769..96158822) extracted from Lotus japonicus Gifu genome v1.2.
ATGTTTCAACGCGCCTTGCAAGGTGTAGACTCTTCAAAACGAAATGCATTGATCATCAAGCAAATAATGCGCCAGATCAT TACATCTCTGAAGAAAATTCACAACACCGGCATTGTTCACCGGGATGTAAAGCCTGCTAACTTGGTGGTTACCAAACGGG GGCAGATAAAACTCATTGATTTTGGTGCAGCAACTGACTTAAGGATTGGAAAGAATTACGCTCCTGATTTTACGCCTTTG GATCGCGACTACTGCCCCCCTGAATTATATGTGCTACCAGAAGAAACACCAAGTCTTCCATCAGAGCCAATTGCAGCTTT ACTTTCACCAATCTTGTGGCAGGTTTTATTTCTATATCCTATTTATATTGTCCAAATTAAGGCTCTTTTATGGGGTGTCA CTATCTGTATGTTTGGAAAACCTTCAACAATTGATTCTAAAGGCAAAATCAATTCTAATGGAGTCTTTTACCTAATGTTC CTAAGTAAGAAATATCTTCACTAGGATTTATAAATCTCACTAAGCCTATAGTCTTCTTTTTCCTATATTTTTTGCATGAA CCAGAATTTACAGATTGTGGTACCATTTACTAATTAATCTTTCTGGAGTCATTTTCTTCAAGCAAACACTATGCAGTATT CTACGCTGTATGTTCCAAATATATTAAGATTGCTAAAGGGGAGTTGTGTGATTTTTGTTGCAGTTAAATAGTCCCGACCT GTTTGATATGTATTCTGCTGGGATTGTACTCATGCAAATGGCAGTACCAGCCTTGAGGTCTCCAGCAACTTTGAAGAATT TCAATCTGGAAATAAAAACATTCGGATATGATTTGAACAAATGGAGGGACTCAACTCGCATCAAGTCTGACTTCCAAATT CTAGATGCTGACTCTGGTAGAGGATGGGACTTGGCGACAAAGCTTATCTCCAAAAGAGGTTCTCAAGGAAGAGGACGTTT ATCCGCTGCTGCAGCTTTGAGGCATCCTTATTTCCTTCTCGGTGGTGATCAGGCAGCTGCTGTGCTTTCAAAATTAAGAT TAAGTACAAAGTGA
CDS sequence (LotjaGi1g1v0458100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTCAACGCGCCTTGCAAGGTGTAGACTCTTCAAAACGAAATGCATTGATCATCAAGCAAATAATGCGCCAGATCAT TACATCTCTGAAGAAAATTCACAACACCGGCATTGTTCACCGGGATGTAAAGCCTGCTAACTTGGTGGTTACCAAACGGG GGCAGATAAAACTCATTGATTTTGGTGCAGCAACTGACTTAAGGATTGGAAAGAATTACGCTCCTGATTTTACGCCTTTG GATCGCGACTACTGCCCCCCTGAATTATATGTGCTACCAGAAGAAACACCAAGTCTTCCATCAGAGCCAATTGCAGCTTT ACTTTCACCAATCTTGTGGCAGTTAAATAGTCCCGACCTGTTTGATATGTATTCTGCTGGGATTGTACTCATGCAAATGG CAGTACCAGCCTTGAGGTCTCCAGCAACTTTGAAGAATTTCAATCTGGAAATAAAAACATTCGGATATGATTTGAACAAA TGGAGGGACTCAACTCGCATCAAGTCTGACTTCCAAATTCTAGATGCTGACTCTGGTAGAGGATGGGACTTGGCGACAAA GCTTATCTCCAAAAGAGGTTCTCAAGGAAGAGGACGTTTATCCGCTGCTGCAGCTTTGAGGCATCCTTATTTCCTTCTCG GTGGTGATCAGGCAGCTGCTGTGCTTTCAAAATTAAGATTAAGTACAAAGTGA
Protein sequence (LotjaGi1g1v0458100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFQRALQGVDSSKRNALIIKQIMRQIITSLKKIHNTGIVHRDVKPANLVVTKRGQIKLIDFGAATDLRIGKNYAPDFTPL DRDYCPPELYVLPEETPSLPSEPIAALLSPILWQLNSPDLFDMYSAGIVLMQMAVPALRSPATLKNFNLEIKTFGYDLNK WRDSTRIKSDFQILDADSGRGWDLATKLISKRGSQGRGRLSAAAALRHPYFLLGGDQAAAVLSKLRLSTK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 228 | 228 | 3.4E-139 | – | |
PANTHER | 1 | 228 | 228 | 3.4E-139 | – | |
SMART | 1 | 211 | 211 | 4.7E-5 | ||
ProSiteProfiles | 1 | 211 | 211 | 19.552 | ||
Gene3D | 9 | 213 | 205 | 1.5E-44 | – | |
SUPERFAMILY | 16 | 212 | 197 | 5.93E-25 | ||
Pfam | 18 | 89 | 72 | 1.2E-17 | ||
ProSitePatterns | 38 | 50 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0458100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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