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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0461000 |
| Transcript ID | LotjaGi1g1v0461000.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transducin/WD40 repeat protein; TAIR: AT3G54190.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q5T5U3|RHG21_HUMAN Rho GTPase-activating protein 21; TrEMBL-Plants: tr|G7KZ83|G7KZ83_MEDTR Transducin/WD40 repeat protein; Found in the gene: LotjaGi1g1v0461000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:96515472..96521886) extracted from Lotus japonicus Gifu genome v1.2.
AAGAGACATAATGAAATCACCATATAATTTTTTTATGACATGATTGTTTATATTACACTTTCCATGTAAAATTATTAATC AAATTAAAAAAACTTGAGTTGGGGGTATATATAAGTCGAATTGCAATTTGCATCAACAAAGGAGAGCATGATTTGGTGTT GAAGTGAAGAGTGCCGCCGTGGTGAGAAGAAGAAGAATGGAAGGAAGGAGGCGCGGTGGTTGGTGTGGTCGGCGCATAGT CGCAACCAGAAGAGGAACTTCCGGCGCCACCGTCAGCAATGGCTTCCGTCTCAACAGCACCACCAGCAACGATGACAGTG TCGTCAAGAAGCTCTTCGGCCGCGAGATTTGTTCCAAGCCTCACCGTGCTTTCGCCGCCACCACCGCTTCTCACAGATTC CGCACCATGCGTTTGACTCAACAGTACGACACTCACGATCCGAAGGGACCCTCTTCTCCTTCTCCTCTTCTGCCCTTTCT GATGAAGAGGACTAAGGTTGTTGAGATCGTCGCTGCTAAAGATATAGTGTTTGCTCTTGCTCATTCTGGTCTCTGTGCTG CTTTTAGTAGAGGTGAGGGTTACCCATCGATTCATCACTGTTGTTTGTGTGGTTTTGTGTGTGAATTGAAATTTCCCATC ATTACCCTTTTGTTAATTGTTTTCATATATGGATAAAAACCATAGGTTTTGATTTCTGATGCATGAATTTTTAGTACCCA TATATGAATCAGTCTATTTTGTAGGAAAAACCCTGGCTTTTGATTTTGATAATTTTATGTATGAATTGCTGTTTCTCATT ATCAATCATTGTCATGTTTTTGTGTAAATTTCATGGCTTTTGATGTTTTATGTGTTCATGAATATTTGACTGGTCAGTAT GTGGAGTAGTTGTTAACTGATGTATTTTGTTGAGGTCCTTATTGATGTAATTGTTTAGGGTTGCTTCGCCTTTAAGACCG ATGTACTTGTTTAGGCTCTTGTTGATGTACTTGTTTAGGCCTGCTTCGCTTGTAAGGCTCAGGCCTCCAGGACTGTGTGC CCTCATGGACGGCTGACCATATGATTCTCGTAAGTGGTCGTCGATAATTGCTCTTAGGGATGAGGTCTATCATAACAGAT TTGCAAGTCCGACTGACTAGTAAGCGGTGTTATCAAAGACTGGCGCCATGGCAGAATCTCAATAGCTCATGGCGGGTTTT TGGCTCTCCACCATGGCATGATATCCCACCATCATTAACAACAGTCTTAGTAAGAGAATACAAAGGAACAGATAGGATAG CAATTCCTTTAGGATCCCGAGCGTTTAACCCACATTAATGGAGATGTTTCGTATTCAAACAGAATCTCAAAGGAGCAGAT AGGATCACAATTCCGTTAGGATCCCGATCATTTAACCCACATTAATGGAGACGAATCTCATCTTCACACGTCATATCCTT GGGCAGAGCTTAGGTCTTGCTGTGATCTATCTCAACGTCTTGGGGTTTTTTTTTTGTGTGAACAAAATCATTGTTTTGTA TAATAAACATGTTATATTTATTTATGTATGAATTTCCATTACCCTTTTGGGCCTTAGTTTTGGTACCATCCTTATAGATT TTCTCACCACCCCAATCTACCGCAGTTATGTTTGCGGGAACCAATTACACACCGCATTTAAGATTGCAGAACAGCGGAAT ACAAGTTATACATTATGCAATGAAAAATGCCAAAAAGGGGATGGTATGAGAATGTAAAGGGGTAGTACCAATAACAATGC CCTACCCATTTTTTCCCATTTATTAGTCATTGTCATATTTGTATGCAAAACCTTGACTTTTGGTTTTATATATTAATTGT CAGTACCATTTCCCATTAGTTAATCTTTGTCTAATGTTTGTATCAAAACCACGAGATTGGGTTTTTCTTATGTATGAATT CTGTGCAGAAACAAATGAGAGGATTTGTTTATTGAATGTCTGCCCTGATGAAGTCATCCGCAGCCTCTTCTACAATAAGA ACAATGACTCGCTTATTACAGTGTCTGTTTATGCTTCTGAGAGCTTCAGCTCTTTGAAATGCAGATCGACAAGGATTGAG TATGTGCATTCTGCAGCTGTACATTTAATTTTTTTGATTAGATGTTTACATCTATTTTTGCTTATATGCTCATTCATTCC TGCTTCTAGATACATACGGAGGGCCAAGCCGGATGCTGGCTTTCCTCTTTTCCAGTCGGAGTCTTTAAAATGGCCTGGAT TTGTGGAATTTGATGATGTTAACGGAAAGGTCCTAACTTACTCTGCACAGGATAGGTACCTTCCTCATTCTCTCCTCTTT TTATTCCGTTGCTACTTCTGTGCTTGTTATCTGTATGCACCTCCCATTGGTTATTCGATCTAACCCATTTTCATCCCATG GTAACAGTATATACAAGGTGTTTGATCTTAAAAACTACACCATGCTTTACTCGATTTCAGATAGGAATGTTCAAGAAATC AAGATCAGGTACTTTCTCCTTTTCGGATTCACTTTCTGCTTCACTGTTCTGGTGTCTGCAGATACCCCCATTTTTCCTAA ATAAATTCTGTCAAAGACATGAGCATGGTCATCTTGTTGATACAATCTTGTTTGTTTTTACTTTTTGCTACATAGGTACC GTTATTAGTATTCACTTGTCAAAATTATGTGGGTTGTTATATTTTGACTGACAGGTGGATCTATATAATCTAGCAAAACC ATGTGATTATGTGAACATCCACTTAGCTAATTAAAATACTTAGGTTTCTGTTTCTGGTCCTCATCATTAAGTTCTGTGAT AAGTTATGCTTTGCATCGCGCACACACACACATATTTATTACTTGAAAGATGAAAGCCTTAAAGAAATTGAGGGGCTATA TAAGTGGGTTATGGATGGATTTTTCGCAACTGAATGTTACAGAAAATTTCCCTGTTAAATGATTTTGAGGAGGCTTTGTT GAAAGAGAAACCAAATTGGAGACAAAAGAGTGATGACTAAGGTGAAATGGGCTAAAGATGGGGATGTAAATTTTTTACTT TTTTCATACGGTGGCTATACGGAGAAAGAGAGAAAGTTTGGTTAAGAAGTTGAGAATCGCAATCGGGAAACTTGTTTGAG ATAGTGAAGTTTTTGCCAAGGAACTTACTGGGTTCCTTACGGAATTGTAGAGTAAGGAGAGTTTGCCTGCACCTTTTTTT GAGAATTCAGATTGGTGATCTATAATTAACTCTTTACAAGGCTTCTTTCATGGAGAGAACCTTTGAAGATGAACTGATGA AATGCTGAGGGCTATTTGGAGCATAGATGCAGATAAGGCTCTGGGTCCTGATGGCCCTTCTCTTGGGTTTTCTTTTTCCA TGGTTGTTTATCATTATAGGTCATCTTTTGAAGGTGTTTTCTAAATTACATAACAATGGAAAATCTAGGGATAATATGGT ACTTTTATTTCTTTGATCCCTGAGGGTGTGGATCTGATCTGTTAGAGATTGCTTAACCATCAGAATTTTCTCCAGTTTGT ATAAAGATTTATGATGATTATTCTATTTGTGTGAATGGGGTGTTTGAAGAGACTGTCTTAGAATCAGAACTTTTCATGCT GGTAGATTGATCTTCAATACTGCCAGTGTTGCATATTATTTTGTAATCAACGCAATTAGGAAAAGTAGAGATCTTATTTT TATGACATGTAGTATATATAATTCACTTCTCCGTGCAATTCAGACTCGCATATTAATCTTATGTCTATTGTTTCTCTTTC TCAACACCTCTGAATTTGAGACAAGCTTGGTCTACTTAACTTAGTTCTTTCGTCATAGCGTCTAGATGAAAGGATTTTGT CTCCTGATCTTTCAAGGTTGTTTTCATTCAAATCTGTTTTCAACTCCAAGCTCATTCAATGAATATAGTGTCATCTTAAT CTATTTGGAAGTCTAAAGCCTCTTAGGTTAAGTCTTGTACTTGCTCAGTGGTGCTTAACAGAACTAATACCAATAGTAAG GTATAGGTTTGTAGGCCATTAGGCTATTTCTCCTGATATGTATGTTATATTTGTTGCTAGCTTAGAATAGCTATTTTGCT GTAGAATATTTTGTCTAGCATTTTTGGAGAAGGTTGGGTGTGGCCTAGGTCGTTGGACCAGTTTTTTTTGTTGACTTGCT TTACTGGTTTTCATTGTAGTTAAGAGCCATGTTTTTGTGGCAATGTGTAACATATTCTACATTTTGGTGCATATGATCGG GAGCATAACACCCTCATCTTTAAGGAGATTTGGCTTCTACTTGGTGTAGGGCACTTGGTCTCCTTAAAGGGATTTCTCTT TTCCCTTGGTTGTTTTCCTTTTTTCAAGGACTAGAACCTCTTATCTTTCTATCTCTTTATTATCTTCTCTTTGTTTTAAT GAATTTCATTTTTTGTTACTTGGTATCTTCCTAATATATTGATTAATTGATGGTTTTTTACAGTCCAGGCATCATGTTGT TAATCTTCAATAGAACCAGTGGCTATATTCCCCTTAAGATTATATCCATTGAAGATGGCACAGTTCTCAAAACATTTAAT CATCTACTTCATCGGAATAAGAAGGTGGACTTCATAGAGCAATTCAATGAAAAGCTTCTTGTCAAGCAAGAAAATGAGAA CCTTCAGATACTTGATGTAAGCCTCGTTTTTCCTTTTCCAAAACTAATTTTATTTCTGTATATGTAATTTCATTTGTGTC TTTTCTTTTAGGCAAATGCTAACCAAGACGCTAGTTAAGGAATTAAAATTTGGAAGTATTCATTAAAATGTAGTTACCAA TGCATGAAATGTTGCACTTTTCGATAAACATTTTCCATTTTTATTCTTAACTAGTGCCGTGAGGGCCACTTGTTTGCAAT ACATTTTTTTTTTTCAAAATATGATTCTCATGTCTATTTGTGTAATTCCTTTTGTTCATAGGTTCGAAATGCTGAGCTAA TGGAAGTAAGCAAAACTGAGTTCATGACCCCATCAGCATTTATCTTTCTGTACGAGAATCAGTTGTTCCTTACATTCAGA AACCGAACAGTTGCTGTTTGGAACTTCCGTGGGGAGCTTGTTACTTCATTTGAGGATCACCTGTTATGGCATCCAGACTG CAACACAAATAACATATACATAACAAGTGATCAGGATCTAATCATCTCATACTGCAAGGCTGATTCTGAAGATCAATGGA TGGAAGGCAATGGTAATTATATTTGAGCTTATCTGTTCTTCGATTTTTGAATGAATTAATCACAATTAGCTTTGAATTTG TTAAAAGTGATTTGATACAATCATGTAATCATAACATGCTTCTTGATGCAGCGGGTTCAATTAATATCAGCAATATCTTA ACGGGAAAATGCGTGGCTAAAATTAATGCTGCAAATACCTGCACGAAGGTGGACGAGTGCAGCTGCACTGCTTGCAGCTG CAAGCAGACTCATTCATCCCAAATAAGGAGCTCGGTTGCAGAGGCTTTGGAAGACATAACTGCCCTCTTTTATGACGAAG ATCGAAACGAGATATACACCGGTAACAGGCATGGTCTTGTTCATGTATGGTCCAACTGATGAAAAGGCTTTTCCTTTTAA TTCTGGCTTGGATTTTCTGATGGGAATGATTCTGATTCAGCATTGGATGCCTCTGAACTGCCTCAGCATTGTACAATATC TGTCATTTGATATGAAATGGTTATCTAGCACAATGTTGTTGTGTGTTTCATAGTTTATGCTGAGATAACCAGTTATAGGG TGAATATTTACCTGTTCAGGAAGTATTTTGTATCTATGCTTTTCTTGTACTTTGAGTTTTAGGTCCTTTTAGAGGTTTGT CTTTATAGTTTCTGTATAGCGCAATGACTTCTGGATATTTTGAGGCCGATGAGACATCTTGTATTATTAGTTTATCTTGG AAACTAAAGGGGATAATGTGGGATGGATGCAAAATGGGCAGAGTACATGGGTTTTTATCCCTTATCTGTATCATTGGTGT AAATCACACAATTAATCTGAAAAACAATTCGGTTTAGTTGCAATATGTTCTTGCATTGCAGTCAAGTAGCGTTCATCGGG AAGCTGCGGATCTCAGTGGCATGATCACTTAGAGATTTCAGCCATTCAAAATATATTTTATTTTTCTTTTGATGTATTTT GAATGGTTAAGATCTTTTTTCAGGTCATGTTATTGAGAGGATCCAAGTCCATGCCGCCACTATTTCTTACATAAATGCTA GTATTGTTATCACAATGGATGTGCTTGCGTATGTACTTATATGATTTTACTATTTTTCCCACTGAAAACTCTCATTCTCT TTTTTTTTTTTTCCAAGTTTTTTCCCACAAATTGAATCAATTTAGTCATTTTAGACGTTCTACTCATCACATGTGACGCA TACGTTAAGCTAGCC
CDS sequence (LotjaGi1g1v0461000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGGAAGGAGGCGCGGTGGTTGGTGTGGTCGGCGCATAGTCGCAACCAGAAGAGGAACTTCCGGCGCCACCGTCAG CAATGGCTTCCGTCTCAACAGCACCACCAGCAACGATGACAGTGTCGTCAAGAAGCTCTTCGGCCGCGAGATTTGTTCCA AGCCTCACCGTGCTTTCGCCGCCACCACCGCTTCTCACAGATTCCGCACCATGCGTTTGACTCAACAGTACGACACTCAC GATCCGAAGGGACCCTCTTCTCCTTCTCCTCTTCTGCCCTTTCTGATGAAGAGGACTAAGGTTGTTGAGATCGTCGCTGC TAAAGATATAGTGTTTGCTCTTGCTCATTCTGGTCTCTGTGCTGCTTTTAGTAGAGAAACAAATGAGAGGATTTGTTTAT TGAATGTCTGCCCTGATGAAGTCATCCGCAGCCTCTTCTACAATAAGAACAATGACTCGCTTATTACAGTGTCTGTTTAT GCTTCTGAGAGCTTCAGCTCTTTGAAATGCAGATCGACAAGGATTGAATACATACGGAGGGCCAAGCCGGATGCTGGCTT TCCTCTTTTCCAGTCGGAGTCTTTAAAATGGCCTGGATTTGTGGAATTTGATGATGTTAACGGAAAGGTCCTAACTTACT CTGCACAGGATAGTATATACAAGGTGTTTGATCTTAAAAACTACACCATGCTTTACTCGATTTCAGATAGGAATGTTCAA GAAATCAAGATCAGTCCAGGCATCATGTTGTTAATCTTCAATAGAACCAGTGGCTATATTCCCCTTAAGATTATATCCAT TGAAGATGGCACAGTTCTCAAAACATTTAATCATCTACTTCATCGGAATAAGAAGGTGGACTTCATAGAGCAATTCAATG AAAAGCTTCTTGTCAAGCAAGAAAATGAGAACCTTCAGATACTTGATGTTCGAAATGCTGAGCTAATGGAAGTAAGCAAA ACTGAGTTCATGACCCCATCAGCATTTATCTTTCTGTACGAGAATCAGTTGTTCCTTACATTCAGAAACCGAACAGTTGC TGTTTGGAACTTCCGTGGGGAGCTTGTTACTTCATTTGAGGATCACCTGTTATGGCATCCAGACTGCAACACAAATAACA TATACATAACAAGTGATCAGGATCTAATCATCTCATACTGCAAGGCTGATTCTGAAGATCAATGGATGGAAGGCAATGCG GGTTCAATTAATATCAGCAATATCTTAACGGGAAAATGCGTGGCTAAAATTAATGCTGCAAATACCTGCACGAAGGTGGA CGAGTGCAGCTGCACTGCTTGCAGCTGCAAGCAGACTCATTCATCCCAAATAAGGAGCTCGGTTGCAGAGGCTTTGGAAG ACATAACTGCCCTCTTTTATGACGAAGATCGAAACGAGATATACACCGGTAACAGGCATGGTCTTGTTCATGTATGGTCC AACTGA
Protein sequence (LotjaGi1g1v0461000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEGRRRGGWCGRRIVATRRGTSGATVSNGFRLNSTTSNDDSVVKKLFGREICSKPHRAFAATTASHRFRTMRLTQQYDTH DPKGPSSPSPLLPFLMKRTKVVEIVAAKDIVFALAHSGLCAAFSRETNERICLLNVCPDEVIRSLFYNKNNDSLITVSVY ASESFSSLKCRSTRIEYIRRAKPDAGFPLFQSESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDRNVQ EIKISPGIMLLIFNRTSGYIPLKIISIEDGTVLKTFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSK TEFMTPSAFIFLYENQLFLTFRNRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSEDQWMEGNA GSINISNILTGKCVAKINAANTCTKVDECSCTACSCKQTHSSQIRSSVAEALEDITALFYDEDRNEIYTGNRHGLVHVWS N
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 11 | 481 | 471 | 1.0E-266 | – | |
| PANTHER | 11 | 481 | 471 | 1.0E-266 | – | |
| SUPERFAMILY | 117 | 480 | 364 | 2.88E-17 | – | |
| Gene3D | 201 | 481 | 281 | 2.8E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0461000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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