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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0461000 |
| Transcript ID | LotjaGi1g1v0461000.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transducin/WD40 repeat protein; TAIR: AT3G54190.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q5T5U3|RHG21_HUMAN Rho GTPase-activating protein 21; TrEMBL-Plants: tr|G7KZ83|G7KZ83_MEDTR Transducin/WD40 repeat protein; Found in the gene: LotjaGi1g1v0461000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:96515668..96521050) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAAGGAAGGAGGCGCGGTGGTTGGTGTGGTCGGCGCATAGTCGCAACCAGAAGAGGAACTTCCGGCGCCACCGTCAG CAATGGCTTCCGTCTCAACAGCACCACCAGCAACGATGACAGTGTCGTCAAGAAGCTCTTCGGCCGCGAGATTTGTTCCA AGCCTCACCGTGCTTTCGCCGCCACCACCGCTTCTCACAGATTCCGCACCATGCGTTTGACTCAACAGTACGACACTCAC GATCCGAAGGGACCCTCTTCTCCTTCTCCTCTTCTGCCCTTTCTGATGAAGAGGACTAAGGTTGTTGAGATCGTCGCTGC TAAAGATATAGTGTTTGCTCTTGCTCATTCTGGTCTCTGTGCTGCTTTTAGTAGAGGTGAGGGTTACCCATCGATTCATC ACTGTTGTTTGTGTGGTTTTGTGTGTGAATTGAAATTTCCCATCATTACCCTTTTGTTAATTGTTTTCATATATGGATAA AAACCATAGGTTTTGATTTCTGATGCATGAATTTTTAGTACCCATATATGAATCAGTCTATTTTGTAGGAAAAACCCTGG CTTTTGATTTTGATAATTTTATGTATGAATTGCTGTTTCTCATTATCAATCATTGTCATGTTTTTGTGTAAATTTCATGG CTTTTGATGTTTTATGTGTTCATGAATATTTGACTGGTCAGTATGTGGAGTAGTTGTTAACTGATGTATTTTGTTGAGGT CCTTATTGATGTAATTGTTTAGGGTTGCTTCGCCTTTAAGACCGATGTACTTGTTTAGGCTCTTGTTGATGTACTTGTTT AGGCCTGCTTCGCTTGTAAGGCTCAGGCCTCCAGGACTGTGTGCCCTCATGGACGGCTGACCATATGATTCTCGTAAGTG GTCGTCGATAATTGCTCTTAGGGATGAGGTCTATCATAACAGATTTGCAAGTCCGACTGACTAGTAAGCGGTGTTATCAA AGACTGGCGCCATGGCAGAATCTCAATAGCTCATGGCGGGTTTTTGGCTCTCCACCATGGCATGATATCCCACCATCATT AACAACAGTCTTAGTAAGAGAATACAAAGGAACAGATAGGATAGCAATTCCTTTAGGATCCCGAGCGTTTAACCCACATT AATGGAGATGTTTCGTATTCAAACAGAATCTCAAAGGAGCAGATAGGATCACAATTCCGTTAGGATCCCGATCATTTAAC CCACATTAATGGAGACGAATCTCATCTTCACACGTCATATCCTTGGGCAGAGCTTAGGTCTTGCTGTGATCTATCTCAAC GTCTTGGGGTTTTTTTTTTGTGTGAACAAAATCATTGTTTTGTATAATAAACATGTTATATTTATTTATGTATGAATTTC CATTACCCTTTTGGGCCTTAGTTTTGGTACCATCCTTATAGATTTTCTCACCACCCCAATCTACCGCAGTTATGTTTGCG GGAACCAATTACACACCGCATTTAAGATTGCAGAACAGCGGAATACAAGTTATACATTATGCAATGAAAAATGCCAAAAA GGGGATGGTATGAGAATGTAAAGGGGTAGTACCAATAACAATGCCCTACCCATTTTTTCCCATTTATTAGTCATTGTCAT ATTTGTATGCAAAACCTTGACTTTTGGTTTTATATATTAATTGTCAGTACCATTTCCCATTAGTTAATCTTTGTCTAATG TTTGTATCAAAACCACGAGATTGGGTTTTTCTTATGTATGAATTCTGTGCAGAAACAAATGAGAGGATTTGTTTATTGAA TGTCTGCCCTGATGAAGTCATCCGCAGCCTCTTCTACAATAAGAACAATGACTCGCTTATTACAGTGTCTGTTTATGCTT CTGAGAGCTTCAGCTCTTTGAAATGCAGATCGACAAGGATTGAGTATGTGCATTCTGCAGCTGTACATTTAATTTTTTTG ATTAGATGTTTACATCTATTTTTGCTTATATGCTCATTCATTCCTGCTTCTAGATACATACGGAGGGCCAAGCCGGATGC TGGCTTTCCTCTTTTCCAGTCGGAGTCTTTAAAATGGCCTGGATTTGTGGAATTTGATGATGTTAACGGAAAGGTCCTAA CTTACTCTGCACAGGATAGGTACCTTCCTCATTCTCTCCTCTTTTTATTCCGTTGCTACTTCTGTGCTTGTTATCTGTAT GCACCTCCCATTGGTTATTCGATCTAACCCATTTTCATCCCATGGTAACAGTATATACAAGGTGTTTGATCTTAAAAACT ACACCATGCTTTACTCGATTTCAGATAGGAATGTTCAAGAAATCAAGATCAGGTACTTTCTCCTTTTCGGATTCACTTTC TGCTTCACTGTTCTGGTGTCTGCAGATACCCCCATTTTTCCTAAATAAATTCTGTCAAAGACATGAGCATGGTCATCTTG TTGATACAATCTTGTTTGTTTTTACTTTTTGCTACATAGGTACCGTTATTAGTATTCACTTGTCAAAATTATGTGGGTTG TTATATTTTGACTGACAGGTGGATCTATATAATCTAGCAAAACCATGTGATTATGTGAACATCCACTTAGCTAATTAAAA TACTTAGGTTTCTGTTTCTGGTCCTCATCATTAAGTTCTGTGATAAGTTATGCTTTGCATCGCGCACACACACACATATT TATTACTTGAAAGATGAAAGCCTTAAAGAAATTGAGGGGCTATATAAGTGGGTTATGGATGGATTTTTCGCAACTGAATG TTACAGAAAATTTCCCTGTTAAATGATTTTGAGGAGGCTTTGTTGAAAGAGAAACCAAATTGGAGACAAAAGAGTGATGA CTAAGGTGAAATGGGCTAAAGATGGGGATGTAAATTTTTTACTTTTTTCATACGGTGGCTATACGGAGAAAGAGAGAAAG TTTGGTTAAGAAGTTGAGAATCGCAATCGGGAAACTTGTTTGAGATAGTGAAGTTTTTGCCAAGGAACTTACTGGGTTCC TTACGGAATTGTAGAGTAAGGAGAGTTTGCCTGCACCTTTTTTTGAGAATTCAGATTGGTGATCTATAATTAACTCTTTA CAAGGCTTCTTTCATGGAGAGAACCTTTGAAGATGAACTGATGAAATGCTGAGGGCTATTTGGAGCATAGATGCAGATAA GGCTCTGGGTCCTGATGGCCCTTCTCTTGGGTTTTCTTTTTCCATGGTTGTTTATCATTATAGGTCATCTTTTGAAGGTG TTTTCTAAATTACATAACAATGGAAAATCTAGGGATAATATGGTACTTTTATTTCTTTGATCCCTGAGGGTGTGGATCTG ATCTGTTAGAGATTGCTTAACCATCAGAATTTTCTCCAGTTTGTATAAAGATTTATGATGATTATTCTATTTGTGTGAAT GGGGTGTTTGAAGAGACTGTCTTAGAATCAGAACTTTTCATGCTGGTAGATTGATCTTCAATACTGCCAGTGTTGCATAT TATTTTGTAATCAACGCAATTAGGAAAAGTAGAGATCTTATTTTTATGACATGTAGTATATATAATTCACTTCTCCGTGC AATTCAGACTCGCATATTAATCTTATGTCTATTGTTTCTCTTTCTCAACACCTCTGAATTTGAGACAAGCTTGGTCTACT TAACTTAGTTCTTTCGTCATAGCGTCTAGATGAAAGGATTTTGTCTCCTGATCTTTCAAGGTTGTTTTCATTCAAATCTG TTTTCAACTCCAAGCTCATTCAATGAATATAGTGTCATCTTAATCTATTTGGAAGTCTAAAGCCTCTTAGGTTAAGTCTT GTACTTGCTCAGTGGTGCTTAACAGAACTAATACCAATAGTAAGGTATAGGTTTGTAGGCCATTAGGCTATTTCTCCTGA TATGTATGTTATATTTGTTGCTAGCTTAGAATAGCTATTTTGCTGTAGAATATTTTGTCTAGCATTTTTGGAGAAGGTTG GGTGTGGCCTAGGTCGTTGGACCAGTTTTTTTTGTTGACTTGCTTTACTGGTTTTCATTGTAGTTAAGAGCCATGTTTTT GTGGCAATGTGTAACATATTCTACATTTTGGTGCATATGATCGGGAGCATAACACCCTCATCTTTAAGGAGATTTGGCTT CTACTTGGTGTAGGGCACTTGGTCTCCTTAAAGGGATTTCTCTTTTCCCTTGGTTGTTTTCCTTTTTTCAAGGACTAGAA CCTCTTATCTTTCTATCTCTTTATTATCTTCTCTTTGTTTTAATGAATTTCATTTTTTGTTACTTGGTATCTTCCTAATA TATTGATTAATTGATGGTTTTTTACAGTCCAGGCATCATGTTGTTAATCTTCAATAGAACCAGTGGCTATATTCCCCTTA AGATTATATCCATTGAAGATGGCACAGTTCTCAAAACATTTAATCATCTACTTCATCGGAATAAGAAGGTGGACTTCATA GAGCAATTCAATGAAAAGCTTCTTGTCAAGCAAGAAAATGAGAACCTTCAGATACTTGATGTAAGCCTCGTTTTTCCTTT TCCAAAACTAATTTTATTTCTGTATATGTAATTTCATTTGTGTCTTTTCTTTTAGGCAAATGCTAACCAAGACGCTAGTT AAGGAATTAAAATTTGGAAGTATTCATTAAAATGTAGTTACCAATGCATGAAATGTTGCACTTTTCGATAAACATTTTCC ATTTTTATTCTTAACTAGTGCCGTGAGGGCCACTTGTTTGCAATACATTTTTTTTTTTCAAAATATGATTCTCATGTCTA TTTGTGTAATTCCTTTTGTTCATAGGTTCGAAATGCTGAGCTAATGGAAGTAAGCAAAACTGAGTTCATGACCCCATCAG CATTTATCTTTCTGTACGAGAATCAGTTGTTCCTTACATTCAGAAACCGAACAGTTGCTGTTTGGAACTTCCGTGGGGAG CTTGTTACTTCATTTGAGGATCACCTGTTATGGCATCCAGACTGCAACACAAATAACATATACATAACAAGTGATCAGGA TCTAATCATCTCATACTGCAAGGCTGATTCTGAAGATCAATGGATGGAAGGCAATGGTAATTATATTTGAGCTTATCTGT TCTTCGATTTTTGAATGAATTAATCACAATTAGCTTTGAATTTGTTAAAAGTGATTTGATACAATCATGTAATCATAACA TGCTTCTTGATGCAGCGGGTTCAATTAATATCAGCAATATCTTAACGGGAAAATGCGTGGCTAAAATTAATGCTGCAAAT ACCTGCACGAAGGTGGACGAGTGCAGCTGCACTGCTTGCAGCTGCAAGCAGACTCATTCATCCCAAATAAGGAGCTCGGT TGCAGAGGCTTTGGAAGACATAACTGCCCTCTTTTATGACGAAGATCGAAACGAGATATACACCGGTAACAGGCATGGTC TTGTTCATGTATGGTCCAACTGA
CDS sequence (LotjaGi1g1v0461000.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGGAAGGAGGCGCGGTGGTTGGTGTGGTCGGCGCATAGTCGCAACCAGAAGAGGAACTTCCGGCGCCACCGTCAG CAATGGCTTCCGTCTCAACAGCACCACCAGCAACGATGACAGTGTCGTCAAGAAGCTCTTCGGCCGCGAGATTTGTTCCA AGCCTCACCGTGCTTTCGCCGCCACCACCGCTTCTCACAGATTCCGCACCATGCGTTTGACTCAACAGTACGACACTCAC GATCCGAAGGGACCCTCTTCTCCTTCTCCTCTTCTGCCCTTTCTGATGAAGAGGACTAAGGTTGTTGAGATCGTCGCTGC TAAAGATATAGTGTTTGCTCTTGCTCATTCTGGTCTCTGTGCTGCTTTTAGTAGAGGTGAGGAAACAAATGAGAGGATTT GTTTATTGAATGTCTGCCCTGATGAAGTCATCCGCAGCCTCTTCTACAATAAGAACAATGACTCGCTTATTACAGTGTCT GTTTATGCTTCTGAGAGCTTCAGCTCTTTGAAATGCAGATCGACAAGGATTGAATACATACGGAGGGCCAAGCCGGATGC TGGCTTTCCTCTTTTCCAGTCGGAGTCTTTAAAATGGCCTGGATTTGTGGAATTTGATGATGTTAACGGAAAGGTCCTAA CTTACTCTGCACAGGATAGTATATACAAGGTGTTTGATCTTAAAAACTACACCATGCTTTACTCGATTTCAGATAGGAAT GTTCAAGAAATCAAGATCAGTCCAGGCATCATGTTGTTAATCTTCAATAGAACCAGTGGCTATATTCCCCTTAAGATTAT ATCCATTGAAGATGGCACAGTTCTCAAAACATTTAATCATCTACTTCATCGGAATAAGAAGGTGGACTTCATAGAGCAAT TCAATGAAAAGCTTCTTGTCAAGCAAGAAAATGAGAACCTTCAGATACTTGATGTTCGAAATGCTGAGCTAATGGAAGTA AGCAAAACTGAGTTCATGACCCCATCAGCATTTATCTTTCTGTACGAGAATCAGTTGTTCCTTACATTCAGAAACCGAAC AGTTGCTGTTTGGAACTTCCGTGGGGAGCTTGTTACTTCATTTGAGGATCACCTGTTATGGCATCCAGACTGCAACACAA ATAACATATACATAACAAGTGATCAGGATCTAATCATCTCATACTGCAAGGCTGATTCTGAAGATCAATGGATGGAAGGC AATGCGGGTTCAATTAATATCAGCAATATCTTAACGGGAAAATGCGTGGCTAAAATTAATGCTGCAAATACCTGCACGAA GGTGGACGAGTGCAGCTGCACTGCTTGCAGCTGCAAGCAGACTCATTCATCCCAAATAAGGAGCTCGGTTGCAGAGGCTT TGGAAGACATAACTGCCCTCTTTTATGACGAAGATCGAAACGAGATATACACCGGTAACAGGCATGGTCTTGTTCATGTA TGGTCCAACTGA
Protein sequence (LotjaGi1g1v0461000.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEGRRRGGWCGRRIVATRRGTSGATVSNGFRLNSTTSNDDSVVKKLFGREICSKPHRAFAATTASHRFRTMRLTQQYDTH DPKGPSSPSPLLPFLMKRTKVVEIVAAKDIVFALAHSGLCAAFSRGEETNERICLLNVCPDEVIRSLFYNKNNDSLITVS VYASESFSSLKCRSTRIEYIRRAKPDAGFPLFQSESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDRN VQEIKISPGIMLLIFNRTSGYIPLKIISIEDGTVLKTFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEV SKTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSEDQWMEG NAGSINISNILTGKCVAKINAANTCTKVDECSCTACSCKQTHSSQIRSSVAEALEDITALFYDEDRNEIYTGNRHGLVHV WSN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 11 | 483 | 473 | 9.9E-265 | – | |
| PANTHER | 11 | 483 | 473 | 9.9E-265 | – | |
| SUPERFAMILY | 144 | 482 | 339 | 1.14E-16 | – | |
| Gene3D | 207 | 483 | 277 | 5.2E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0461000.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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